RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 VCYO14598 125 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 CIDEAO60543 219 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 NDUFA7O95182 113 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 COX8AP10176 69 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 RNASE3P12724 160 aaKnown RBP6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 EVI2AP22794 236 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 PLNP26678 52 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 KRTAP10-9P60411 292 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 NUTF2P61970 127 aaKnown RBP6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 KRTAP19-1Q8IUB9 90 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 NRACQ8N912 160 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 C9orf85Q96MD7 179 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 SNHG12Q9BXW3 62 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 ZMAT4Q9H898 229 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 TSSC4Q9Y5U2 329 aaPredicted RBP6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 ANKRD17O75179 2603 aaKnown RBP6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 A0A096LNJ9 63 aa6.51□□□□□ -1.37
SNRNP40-202ENST00000373720 LOC389332A0A1B0GUA5 103 aa6.51□□□□□ -1.37
SNRNP40-202ENST00000373720 GAGE1Q13065 139 aa6.51□□□□□ -1.37
SNRNP40-202ENST00000373720 FHL3Q13643 280 aa6.51□□□□□ -1.37
SNRNP40-202ENST00000373720 OR11H1Q8NG94 326 aa6.51□□□□□ -1.37
SNRNP40-202ENST00000373720 DYNLRB2Q8TF09 96 aa6.51□□□□□ -1.37
SNRNP40-202ENST00000373720 KIR2DL4Q99706 377 aa6.51□□□□□ -1.37
SNRNP40-202ENST00000373720 SPXQ9BT56 116 aa6.51□□□□□ -1.37
SNRNP40-202ENST00000373720 MSRB1Q9NZV6 116 aa6.51□□□□□ -1.37
SNRNP40-202ENST00000373720 ZNF256Q9Y2P7 627 aaPredicted RBP6.51□□□□□ -1.37
SNRNP40-202ENST00000373720 SPG11Q96JI7 2443 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 NAV2Q8IVL1 2488 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 A8MWV9 139 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 RHODO00212 210 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 CD7P09564 240 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 CRYBA4P53673 196 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 PRR9Q5T870 116 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 Q6ZSV7 163 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 TRPT1Q86TN4 253 aaKnown RBP6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 TOMM6Q96B49 74 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 TMEM141Q96I45 108 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 RAX2Q96IS3 184 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 DUX5Q96PT3 197 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 RNF114Q9Y508 228 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 LRRK2Q5S007 2527 aa6.5□□□□□ -1.37
SNRNP40-202ENST00000373720 IGHV3-16A0A0C4DH30 117 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 KRTAP4-8A0A0G2JLE6 195 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 TRBV27A0A0K0K1C4 114 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 DNAJC9-AS1A6NH13 148 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 DPM2O94777 84 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 PRSS1P07477 247 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 ZNF688P0C7X2 276 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 HILS1P60008 231 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 SEC11AP67812 179 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 RHOHQ15669 191 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 DEFB114Q30KQ6 69 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 TMEM95Q3KNT9 176 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 Q71RC1 249 aaPredicted RBP6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 ERASQ7Z444 233 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 HIGD1BQ9P298 99 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 KIF25-AS1Q9Y6Z4 181 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 CHD6Q8TD26 2715 aa6.49□□□□□ -1.37
SNRNP40-202ENST00000373720 COL12A1Q99715 3063 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 FAM208BQ5VWN6 2430 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 CREBBPQ92793 2442 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 A0A087WX48 190 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 H3BMM0 161 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 PAX4O43316 350 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 NUDT3O95989 172 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 IGKCP01834 107 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 FOSL1P15407 271 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 POLR2KP53803 58 aaKnown RBP6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 SHISA2Q6UWI4 295 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 AMTNQ6UX39 209 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 LCNL1Q6ZST4 164 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 KLHL30-AS1Q8NEE0 82 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 WFDC11Q8NEX6 87 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 TMEM158Q8WZ71 300 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 DNAJC30Q96LL9 226 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 TIMM17AQ99595 171 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 CYSLTR1Q9Y271 337 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 CR1P17927 2039 aa6.48□□□□□ -1.37
SNRNP40-202ENST00000373720 TRAV12-3A0A0B4J271 114 aa6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 NCR2O95944 276 aa6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 ZNF415Q09FC8 603 aa6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 SMAGPQ0VAQ4 97 aa6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 ODF1Q14990 250 aa6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 TAL2Q16559 108 aa6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 ZFP2Q6ZN57 461 aa6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 WFDC3Q8IUB2 231 aa6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 C14orf178Q8N769 122 aaPredicted RBP6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 MAPK1IP1LQ8NDC0 245 aa6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 ORAOV1Q8WV07 137 aa6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 RASL10AQ92737 203 aa6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 C1QTNF4Q9BXJ3 329 aa6.47□□□□□ -1.37
SNRNP40-202ENST00000373720 IGKV3-7A0A075B6H7 116 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 A6NDN8 102 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 F6UB75 175 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 F8VRH5 84 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 SMKR1H3BMG3 65 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 M0R2P5 195 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 CCL24O00175 119 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 GNRH2O43555 120 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 INSP01308 110 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms