RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 ANXA2RQ3ZCQ2 193 aa13.53□□□□□ -0.24
VPS26A-202ENST00000373382 RBAKDNA6NC62 111 aa13.52□□□□□ -0.24
VPS26A-202ENST00000373382 SAA4P35542 130 aa13.52□□□□□ -0.24
VPS26A-202ENST00000373382 PSMG3-AS1Q96PY0 264 aa13.52□□□□□ -0.24
VPS26A-202ENST00000373382 TMEM170BQ5T4T1 132 aa13.52□□□□□ -0.24
VPS26A-202ENST00000373382 ASIPP42127 132 aa13.52□□□□□ -0.25
VPS26A-202ENST00000373382 Q8N6K4 173 aa13.52□□□□□ -0.25
VPS26A-202ENST00000373382 NEXN-AS1Q8NBZ9 246 aa13.51□□□□□ -0.25
VPS26A-202ENST00000373382 OR10J6PQ8NGY7 276 aa13.51□□□□□ -0.25
VPS26A-202ENST00000373382 TMEM238LA0A1B0GVL6 79 aa13.51□□□□□ -0.25
VPS26A-202ENST00000373382 IGF2-ASQ6U949 168 aa13.51□□□□□ -0.25
VPS26A-202ENST00000373382 DLX4Q92988 240 aaPredicted RBP13.51□□□□□ -0.25
VPS26A-202ENST00000373382 MRAP2Q96G30 205 aa13.51□□□□□ -0.25
VPS26A-202ENST00000373382 JPT2Q9H910 190 aa13.51□□□□□ -0.25
VPS26A-202ENST00000373382 PRO0461Q9UI25 63 aa13.51□□□□□ -0.25
VPS26A-202ENST00000373382 DOPEY2Q9Y3R5 2298 aa13.51□□□□□ -0.25
VPS26A-202ENST00000373382 DPH3P1Q9H4G8 78 aa13.51□□□□□ -0.25
VPS26A-202ENST00000373382 A0A087WWL8 130 aa13.5□□□□□ -0.25
VPS26A-202ENST00000373382 TRBV12-3P01733 135 aa13.5□□□□□ -0.25
VPS26A-202ENST00000373382 TOMM6Q96B49 74 aa13.5□□□□□ -0.25
VPS26A-202ENST00000373382 UBTD1Q9HAC8 227 aa13.5□□□□□ -0.25
VPS26A-202ENST00000373382 IGHV3-64A0A075B6Q5 118 aa13.5□□□□□ -0.25
VPS26A-202ENST00000373382 RPL39P62891 51 aaKnown RBP13.5□□□□□ -0.25
VPS26A-202ENST00000373382 FOXI1Q12951 378 aa13.5□□□□□ -0.25
VPS26A-202ENST00000373382 FAM74A4Q5TZK3 123 aa13.5□□□□□ -0.25
VPS26A-202ENST00000373382 UNQ9165/PRO28630Q6UXU0 137 aa13.5□□□□□ -0.25
VPS26A-202ENST00000373382 CSPG4Q6UVK1 2322 aa13.49□□□□□ -0.25
VPS26A-202ENST00000373382 A6NJY4 79 aa13.49□□□□□ -0.25
VPS26A-202ENST00000373382 SPINK8P0C7L1 97 aa13.49□□□□□ -0.25
VPS26A-202ENST00000373382 FOXC1Q12948 553 aa13.49□□□□□ -0.25
VPS26A-202ENST00000373382 SPATA25Q9BR10 227 aa13.49□□□□□ -0.25
VPS26A-202ENST00000373382 TP53TG1Q9Y2A0 90 aa13.49□□□□□ -0.25
VPS26A-202ENST00000373382 C9orf47Q6ZRZ4 202 aa13.49□□□□□ -0.25
VPS26A-202ENST00000373382 NFE4Q86UQ8 179 aa13.49□□□□□ -0.25
VPS26A-202ENST00000373382 C11orf86A6NJI1 115 aa13.48□□□□□ -0.25
VPS26A-202ENST00000373382 TSPAN13O95857 204 aa13.48□□□□□ -0.25
VPS26A-202ENST00000373382 TRAV12-1A0A0B4J245 112 aa13.48□□□□□ -0.25
VPS26A-202ENST00000373382 TRAV21A0A0B4J279 112 aa13.48□□□□□ -0.25
VPS26A-202ENST00000373382 SMCPP49901 116 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-202ENST00000373382 MT-ATP8P03928 68 aa13.47□□□□□ -0.25
VPS26A-202ENST00000373382 RAX2Q96IS3 184 aa13.47□□□□□ -0.25
VPS26A-202ENST00000373382 IGKV3-20P01619 116 aa13.47□□□□□ -0.25
VPS26A-202ENST00000373382 MINOS1Q5TGZ0 78 aa13.47□□□□□ -0.25
VPS26A-202ENST00000373382 ZNF256Q9Y2P7 627 aaPredicted RBP13.47□□□□□ -0.25
VPS26A-202ENST00000373382 MINOS1-NBL1R4GNA1 71 aa13.47□□□□□ -0.25
VPS26A-202ENST00000373382 TRAV26-1A0A087WT03 109 aa13.46□□□□□ -0.25
VPS26A-202ENST00000373382 Q6ZS46 218 aa13.46□□□□□ -0.25
VPS26A-202ENST00000373382 C1QTNF4Q9BXJ3 329 aa13.46□□□□□ -0.25
VPS26A-202ENST00000373382 SCGB1A1P11684 91 aa13.46□□□□□ -0.26
VPS26A-202ENST00000373382 LY6EQ16553 131 aa13.45□□□□□ -0.26
VPS26A-202ENST00000373382 ZFAND2AQ8N6M9 145 aa13.45□□□□□ -0.26
VPS26A-202ENST00000373382 GEMIN7Q9H840 131 aaKnown RBP13.45□□□□□ -0.26
VPS26A-202ENST00000373382 NCOR2Q9Y618 2525 aa13.45□□□□□ -0.26
VPS26A-202ENST00000373382 CFAP126Q5VTH2 177 aa13.45□□□□□ -0.26
VPS26A-202ENST00000373382 EBI3Q14213 229 aa13.45□□□□□ -0.26
VPS26A-202ENST00000373382 BRD3OSQ6XYD6 125 aa13.44□□□□□ -0.26
VPS26A-202ENST00000373382 NOTCH3Q9UM47 2321 aa13.44□□□□□ -0.26
VPS26A-202ENST00000373382 KIR2DL4Q99706 377 aa13.44□□□□□ -0.26
VPS26A-202ENST00000373382 TRBV7-1A0A0A6YYK4 115 aa13.43□□□□□ -0.26
VPS26A-202ENST00000373382 OOSP1A8MZH6 123 aa13.43□□□□□ -0.26
VPS26A-202ENST00000373382 HERVK_113P61574 105 aa13.43□□□□□ -0.26
VPS26A-202ENST00000373382 OPRPNQ99935 248 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-202ENST00000373382 C9orf139Q6ZV77 190 aa13.43□□□□□ -0.26
VPS26A-202ENST00000373382 TCL1BO95988 128 aa13.43□□□□□ -0.26
VPS26A-202ENST00000373382 IGHV4-4A0A075B6R2 117 aa13.42□□□□□ -0.26
VPS26A-202ENST00000373382 TRAV41A0A0B4J266 112 aa13.42□□□□□ -0.26
VPS26A-202ENST00000373382 BEX4Q9NWD9 120 aaPredicted RBP13.42□□□□□ -0.26
VPS26A-202ENST00000373382 HIVEP3Q5T1R4 2406 aa13.42□□□□□ -0.26
VPS26A-202ENST00000373382 LINC00477Q96M19 166 aa13.42□□□□□ -0.26
VPS26A-202ENST00000373382 SIRPDQ9H106 197 aa13.42□□□□□ -0.26
VPS26A-202ENST00000373382 CENPVL3A0A0U1RRI6 287 aa13.41□□□□□ -0.26
VPS26A-202ENST00000373382 FHL3Q13643 280 aa13.41□□□□□ -0.26
VPS26A-202ENST00000373382 CRYGDP07320 174 aa13.41□□□□□ -0.26
VPS26A-202ENST00000373382 XGP55808 180 aa13.41□□□□□ -0.26
VPS26A-202ENST00000373382 CHD8Q9HCK8 2581 aa13.41□□□□□ -0.26
VPS26A-202ENST00000373382 PF4V1P10720 104 aa13.41□□□□□ -0.26
VPS26A-202ENST00000373382 Q1RN00 199 aa13.41□□□□□ -0.26
VPS26A-202ENST00000373382 CDIP1Q9H305 208 aa13.41□□□□□ -0.26
VPS26A-202ENST00000373382 CD7P09564 240 aa13.4□□□□□ -0.26
VPS26A-202ENST00000373382 UBE2E1P51965 193 aa13.4□□□□□ -0.26
VPS26A-202ENST00000373382 TSPEAR-AS2P59090 65 aa13.4□□□□□ -0.26
VPS26A-202ENST00000373382 NDUFA11Q86Y39 141 aa13.4□□□□□ -0.26
VPS26A-202ENST00000373382 BPESC1Q9GZL8 116 aa13.4□□□□□ -0.26
VPS26A-202ENST00000373382 TRAV12-3A0A0B4J271 114 aa13.4□□□□□ -0.26
VPS26A-202ENST00000373382 TRAV2A0A0B4J234 112 aa13.39□□□□□ -0.27
VPS26A-202ENST00000373382 A0A0J9YY99 117 aa13.39□□□□□ -0.27
VPS26A-202ENST00000373382 RNASE3P12724 160 aaKnown RBP13.39□□□□□ -0.27
VPS26A-202ENST00000373382 FAM159AQ6UWV7 190 aa13.39□□□□□ -0.27
VPS26A-202ENST00000373382 MUC4Q99102 2169 aa13.39□□□□□ -0.27
VPS26A-202ENST00000373382 TSHBP01222 138 aa13.39□□□□□ -0.27
VPS26A-202ENST00000373382 CRYBA4P53673 196 aa13.39□□□□□ -0.27
VPS26A-202ENST00000373382 MRPL53Q96EL3 112 aaKnown RBP13.39□□□□□ -0.27
VPS26A-202ENST00000373382 A0A1W2PPR1 153 aa13.39□□□□□ -0.27
VPS26A-202ENST00000373382 A8MWV9 139 aa13.39□□□□□ -0.27
VPS26A-202ENST00000373382 LGALS3P17931 250 aaKnown RBP13.39□□□□□ -0.27
VPS26A-202ENST00000373382 GPHB5Q86YW7 130 aa13.39□□□□□ -0.27
VPS26A-202ENST00000373382 RNF223E7ERA6 249 aa13.38□□□□□ -0.27
VPS26A-202ENST00000373382 UBE2D1P51668 147 aa13.38□□□□□ -0.27
VPS26A-202ENST00000373382 SDHAF1A6NFY7 115 aa13.38□□□□□ -0.27
VPS26A-202ENST00000373382 NPFFO15130 113 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms