RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TMEM8BA6NDV4 472 aa17.85■□□□□ 0.45
CDK9-201ENST00000373264 NEGR1Q7Z3B1 354 aa17.85■□□□□ 0.45
CDK9-201ENST00000373264 MRPL35Q9NZE8 188 aaKnown RBP17.85■□□□□ 0.45
CDK9-201ENST00000373264 HIST2H2BDQ6DRA6 164 aa17.84■□□□□ 0.45
CDK9-201ENST00000373264 SMIM2Q9BVW6 85 aa17.84■□□□□ 0.45
CDK9-201ENST00000373264 TMEM160Q9NX00 188 aa17.84■□□□□ 0.45
CDK9-201ENST00000373264 MYO9AB2RTY4 2548 aa17.84■□□□□ 0.45
CDK9-201ENST00000373264 TRAV12-3A0A0B4J271 114 aa17.84■□□□□ 0.45
CDK9-201ENST00000373264 NAA38Q9BRA0 125 aaKnown RBP17.84■□□□□ 0.45
CDK9-201ENST00000373264 TRAV12-2A0A075B6T6 113 aa17.83■□□□□ 0.45
CDK9-201ENST00000373264 SLC25A16P16260 332 aa17.83■□□□□ 0.45
CDK9-201ENST00000373264 APRG1Q8IVJ8 170 aa17.83■□□□□ 0.45
CDK9-201ENST00000373264 TRAV8-6A0A0B4J262 113 aa17.83■□□□□ 0.44
CDK9-201ENST00000373264 PRSS47A8MTI9 375 aa17.83■□□□□ 0.44
CDK9-201ENST00000373264 IGKCP01834 107 aa17.83■□□□□ 0.44
CDK9-201ENST00000373264 SYNJ2BPP57105 145 aa17.83■□□□□ 0.44
CDK9-201ENST00000373264 PSMG4Q5JS54 123 aa17.83■□□□□ 0.44
CDK9-201ENST00000373264 AMMECR1LQ6DCA0 310 aa17.83■□□□□ 0.44
CDK9-201ENST00000373264 ADAMTSL5Q6ZMM2 481 aa17.83■□□□□ 0.44
CDK9-201ENST00000373264 GATA3P23771 443 aa17.82■□□□□ 0.44
CDK9-201ENST00000373264 MRAP2Q96G30 205 aa17.82■□□□□ 0.44
CDK9-201ENST00000373264 BEX4Q9NWD9 120 aaPredicted RBP17.82■□□□□ 0.44
CDK9-201ENST00000373264 CR1P17927 2039 aa17.82■□□□□ 0.44
CDK9-201ENST00000373264 K7EP13 123 aa17.82■□□□□ 0.44
CDK9-201ENST00000373264 DSCR9P59020 149 aa17.82■□□□□ 0.44
CDK9-201ENST00000373264 ZC2HC1BQ5TFG8 222 aa17.82■□□□□ 0.44
CDK9-201ENST00000373264 DPH3P1Q9H4G8 78 aa17.82■□□□□ 0.44
CDK9-201ENST00000373264 SUMO2P61956 95 aaKnown RBP17.81■□□□□ 0.44
CDK9-201ENST00000373264 KLLNB2CW77 178 aa17.81■□□□□ 0.44
CDK9-201ENST00000373264 K7EMT4 169 aa17.8■□□□□ 0.44
CDK9-201ENST00000373264 MYOZ3Q8TDC0 251 aa17.8■□□□□ 0.44
CDK9-201ENST00000373264 C18orf65Q6ZTR6 163 aa17.79■□□□□ 0.44
CDK9-201ENST00000373264 SONP18583 2426 aaKnown RBP17.79■□□□□ 0.44
CDK9-201ENST00000373264 IGHV4OR15-8A0A075B7B6 117 aa17.79■□□□□ 0.44
CDK9-201ENST00000373264 A0A087WW49 117 aa17.79■□□□□ 0.44
CDK9-201ENST00000373264 COX6B1P14854 86 aa17.79■□□□□ 0.44
CDK9-201ENST00000373264 APCP25054 2843 aa17.79■□□□□ 0.44
CDK9-201ENST00000373264 A0A087WWL8 130 aa17.78■□□□□ 0.44
CDK9-201ENST00000373264 DPM2O94777 84 aa17.78■□□□□ 0.44
CDK9-201ENST00000373264 ATP5LO75964 103 aa17.77■□□□□ 0.44
CDK9-201ENST00000373264 CD7P09564 240 aa17.77■□□□□ 0.44
CDK9-201ENST00000373264 K7EMI3 77 aa17.77■□□□□ 0.43
CDK9-201ENST00000373264 HOXA3O43365 443 aaPredicted RBP17.77■□□□□ 0.43
CDK9-201ENST00000373264 LINC00315P59091 139 aa17.77■□□□□ 0.43
CDK9-201ENST00000373264 DEFB136Q30KP8 78 aa17.77■□□□□ 0.43
CDK9-201ENST00000373264 FAM159AQ6UWV7 190 aa17.77■□□□□ 0.43
CDK9-201ENST00000373264 OR4C5Q8NGB2 326 aa17.77■□□□□ 0.43
CDK9-201ENST00000373264 RNASE8Q8TDE3 154 aaKnown RBP17.77■□□□□ 0.43
CDK9-201ENST00000373264 ZNF580Q9UK33 172 aa17.77■□□□□ 0.43
CDK9-201ENST00000373264 ID1P41134 155 aa17.76■□□□□ 0.43
CDK9-201ENST00000373264 IGHV4-31P0DP07 118 aa17.76■□□□□ 0.43
CDK9-201ENST00000373264 OR9G4Q8NGQ1 327 aa17.76■□□□□ 0.43
CDK9-201ENST00000373264 ZNF702PQ9H963 129 aa17.76■□□□□ 0.43
CDK9-201ENST00000373264 VPREB3Q9UKI3 123 aa17.76■□□□□ 0.43
CDK9-201ENST00000373264 KIF25-AS1Q9Y6Z4 181 aa17.76■□□□□ 0.43
CDK9-201ENST00000373264 MAPKAPK5-AS1Q8N8E1 139 aa17.75■□□□□ 0.43
CDK9-201ENST00000373264 RAB37Q96AX2 223 aa17.75■□□□□ 0.43
CDK9-201ENST00000373264 AP1S3Q96PC3 154 aa17.75■□□□□ 0.43
CDK9-201ENST00000373264 MDFICQ9P1T7 246 aa17.75■□□□□ 0.43
CDK9-201ENST00000373264 NF1P21359 2839 aa17.75■□□□□ 0.43
CDK9-201ENST00000373264 JMJD8Q96S16 334 aa17.74■□□□□ 0.43
CDK9-201ENST00000373264 A0A087WX48 190 aa17.74■□□□□ 0.43
CDK9-201ENST00000373264 HSD52Q0P140 79 aa17.74■□□□□ 0.43
CDK9-201ENST00000373264 SPINK13Q1W4C9 94 aa17.74■□□□□ 0.43
CDK9-201ENST00000373264 SCGB3A1Q96QR1 104 aa17.74■□□□□ 0.43
CDK9-201ENST00000373264 CSTL1Q9H114 145 aa17.74■□□□□ 0.43
CDK9-201ENST00000373264 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.73■□□□□ 0.43
CDK9-201ENST00000373264 HOXD3P31249 432 aaPredicted RBP17.73■□□□□ 0.43
CDK9-201ENST00000373264 SEC11AP67812 179 aa17.73■□□□□ 0.43
CDK9-201ENST00000373264 ZNF843Q8N446 348 aa17.73■□□□□ 0.43
CDK9-201ENST00000373264 A0A0J9YX75 114 aa17.72■□□□□ 0.43
CDK9-201ENST00000373264 Q6YL49 198 aa17.72■□□□□ 0.43
CDK9-201ENST00000373264 DUX3Q96PT4 197 aa17.72■□□□□ 0.43
CDK9-201ENST00000373264 AKAP9Q99996 3911 aa17.72■□□□□ 0.43
CDK9-201ENST00000373264 TRBV7-9A0A0J9YWB2 115 aa17.72■□□□□ 0.43
CDK9-201ENST00000373264 MED14OSP0DP75 135 aa17.72■□□□□ 0.43
CDK9-201ENST00000373264 K7EQG2 157 aa17.71■□□□□ 0.43
CDK9-201ENST00000373264 FAM74A4Q5TZK3 123 aa17.71■□□□□ 0.43
CDK9-201ENST00000373264 C2orf66Q6UXQ4 117 aa17.71■□□□□ 0.43
CDK9-201ENST00000373264 TOMM6Q96B49 74 aa17.71■□□□□ 0.43
CDK9-201ENST00000373264 C20orf78Q9BR46 151 aa17.71■□□□□ 0.43
CDK9-201ENST00000373264 TRBV25-1A0A075B6N4 114 aa17.71■□□□□ 0.42
CDK9-201ENST00000373264 J3QLI3 93 aa17.71■□□□□ 0.42
CDK9-201ENST00000373264 SIVA1O15304 175 aa17.71■□□□□ 0.42
CDK9-201ENST00000373264 NXPH4O95158 308 aa17.71■□□□□ 0.42
CDK9-201ENST00000373264 FXYD2P54710 66 aa17.71■□□□□ 0.42
CDK9-201ENST00000373264 PRRC2AP48634 2157 aaKnown RBP17.71■□□□□ 0.42
CDK9-201ENST00000373264 FSHBP01225 129 aa17.7■□□□□ 0.42
CDK9-201ENST00000373264 LGALS1P09382 135 aaKnown RBP17.7■□□□□ 0.42
CDK9-201ENST00000373264 SUMO4Q6EEV6 95 aa17.7■□□□□ 0.42
CDK9-201ENST00000373264 H3BUT2 72 aa17.7■□□□□ 0.42
CDK9-201ENST00000373264 GCSHP23434 173 aa17.7■□□□□ 0.42
CDK9-201ENST00000373264 F5H697 171 aa17.69■□□□□ 0.42
CDK9-201ENST00000373264 SLURP1P55000 103 aa17.69■□□□□ 0.42
CDK9-201ENST00000373264 ORMDL2Q53FV1 153 aa17.69■□□□□ 0.42
CDK9-201ENST00000373264 CHAC1Q9BUX1 264 aa17.69■□□□□ 0.42
CDK9-201ENST00000373264 ITPR3Q14573 2671 aa17.69■□□□□ 0.42
CDK9-201ENST00000373264 Q8N1Y9 231 aa17.69■□□□□ 0.42
CDK9-201ENST00000373264 CCDC168Q8NDH2 2452 aa17.69■□□□□ 0.42
CDK9-201ENST00000373264 CHD6Q8TD26 2715 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms