RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 NPYP01303 97 aa3.42□□□□□ -1.86
PCDH11X-204ENST00000373088 PRM2P04554 102 aa3.42□□□□□ -1.86
PCDH11X-204ENST00000373088 KLK9Q2XQG4 91 aa3.42□□□□□ -1.86
PCDH11X-204ENST00000373088 ZNF580Q9UK33 172 aa3.42□□□□□ -1.86
PCDH11X-204ENST00000373088 IGHV1OR15-1A0A075B7D0 117 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 CACNG7P62955 275 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 JOSD1Q15040 202 aaPredicted RBP3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 ZNF876PQ49A33 203 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 DMRTA1Q5VZB9 504 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 TP53TG3Q9ULZ0 132 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 ZNF256Q9Y2P7 627 aaPredicted RBP3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 SOCS3O14543 225 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 NUDT3O95989 172 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 Q6ZWC4 215 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 Q8N2B8 174 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 SPAG8Q99932 426 aaPredicted RBP3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 JPT2Q9H910 190 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 MDFICQ9P1T7 246 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 HSPB8Q9UJY1 196 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 SETXQ7Z333 2677 aaKnown RBP3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 TCAPO15273 167 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 TNFRSF6BO95407 300 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 C3orf79P0CE67 100 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 COA6Q5JTJ3 125 aaKnown RBP3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 Q8N1Y9 231 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 TMEM191AQ9H0A3 160 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 GSN-AS1Q9NRJ2 163 aa3.41□□□□□ -1.86
PCDH11X-204ENST00000373088 IGHV3-53P01767 116 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 FCER1GP30273 86 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 RIPPLY3P57055 190 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 NEGR1Q7Z3B1 354 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 OR2K2Q8NGT1 345 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 TMEM70Q9BUB7 260 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 WFDC10AQ9H1F0 79 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 DPH3P1Q9H4G8 78 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 MAP6D1Q9H9H5 199 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 TRGV11A0A075B6L2 103 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 INSP01308 110 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 PPBPP02775 128 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 IGLC6P0CF74 106 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 C3orf56Q8N813 242 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 SIGLEC8Q9NYZ4 499 aa3.4□□□□□ -1.86
PCDH11X-204ENST00000373088 NBPF19A0A087WUL8 3843 aa3.4□□□□□ -1.87
PCDH11X-204ENST00000373088 TRGV1A0A0A0MS02 117 aa3.4□□□□□ -1.87
PCDH11X-204ENST00000373088 IGHV3-16A0A0C4DH30 117 aa3.4□□□□□ -1.87
PCDH11X-204ENST00000373088 H3BMM0 161 aa3.4□□□□□ -1.87
PCDH11X-204ENST00000373088 CTRLP40313 264 aa3.4□□□□□ -1.87
PCDH11X-204ENST00000373088 ADAMTSL5Q6ZMM2 481 aa3.4□□□□□ -1.87
PCDH11X-204ENST00000373088 LINC00173Q6ZV60 143 aa3.4□□□□□ -1.87
PCDH11X-204ENST00000373088 GTSCR1Q86UQ5 136 aa3.4□□□□□ -1.87
PCDH11X-204ENST00000373088 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.4□□□□□ -1.87
PCDH11X-204ENST00000373088 MYOZ3Q8TDC0 251 aa3.4□□□□□ -1.87
PCDH11X-204ENST00000373088 HIVEP1P15822 2718 aa3.4□□□□□ -1.87
PCDH11X-204ENST00000373088 GAS8-AS1O95177 125 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 RRN3P1Q2M238 152 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 CHCHD1Q96BP2 118 aaKnown RBP3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 BAHCC1Q9P281 2608 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 IGHV1-24A0A0C4DH33 117 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 HLA-DRB4P13762 266 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 PKIAP61925 76 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 SPATA45Q537H7 98 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 Q6ZN92 141 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 RNF152Q8N8N0 203 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 HLA-DRB4X5D2U9 266 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 TRGV2A0A075B6R0 118 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 LINC00587B1AMM8 73 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 CRLF1O75462 422 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 HBDP02042 147 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 PROK1P58294 105 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 RPL39LQ96EH5 51 aaKnown RBP3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 C14orf144Q96I85 54 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 ST20Q9HBF5 79 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 MRPL16Q9NX20 251 aaKnown RBP3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 LINC00310P59036 64 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 DEFB125Q8N687 156 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 TMEM158Q8WZ71 300 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 KIR2DL4Q99706 377 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 CSTL1Q9H114 145 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 NXT2Q9NPJ8 142 aaKnown RBP3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 GOLT1BQ9Y3E0 138 aa3.39□□□□□ -1.87
PCDH11X-204ENST00000373088 SNAI2O43623 268 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 ZNF415Q09FC8 603 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 TDRG1Q3Y452 100 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 ZNF664Q8N3J9 261 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 TNFRSF18Q9Y5U5 241 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 MAST4O15021 2626 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 KLLNB2CW77 178 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 ODF3L2Q3SX64 289 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 ZNF493Q6ZR52 646 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 NDUFA11Q86Y39 141 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 IFI27L1Q96BM0 104 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 SCGB3A1Q96QR1 104 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 C16orf95Q9H693 158 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 NIPBLQ6KC79 2804 aaeCLIP3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 TRAV25A0A0B4J276 109 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 NDUFA7O95182 113 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 RNASE3P12724 160 aaKnown RBP3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 FOSL1P15407 271 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 DDTP30046 118 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 CMC4P56277 68 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms