RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 WFDC12Q8WWY7 111 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 SMR3AQ99954 134 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 ESM1Q9NQ30 184 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 AKAP9Q99996 3911 aa10.01□□□□□ -0.81
CSTF2-201ENST00000372972 TRAV26-2A0A0B4J265 109 aa10□□□□□ -0.81
CSTF2-201ENST00000372972 hDV102S1A0JD36 115 aa10□□□□□ -0.81
CSTF2-201ENST00000372972 FCER1GP30273 86 aa10□□□□□ -0.81
CSTF2-201ENST00000372972 DEFB136Q30KP8 78 aa10□□□□□ -0.81
CSTF2-201ENST00000372972 C4orf3Q8WVX3 66 aa10□□□□□ -0.81
CSTF2-201ENST00000372972 IGLV2-18A0A075B6J9 118 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 SPRY2O43597 315 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 ADAMTSL5Q6ZMM2 481 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 OR11H1Q8NG94 326 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 DPF1Q92782 380 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 IFI27L1Q96BM0 104 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 PMCHL2Q9BQD1 86 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 DPH3P1Q9H4G8 78 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 TRAV12-3A0A0B4J271 114 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 C7orf71A4D174 169 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 DUSP14O95147 198 aaKnown RBP9.99□□□□□ -0.81
CSTF2-201ENST00000372972 TSPOP30536 169 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 LGALS9BQ3B8N2 356 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 LGALS9CQ6DKI2 356 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 Q6ZSV7 163 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 OR1N2Q8NGR9 330 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 PEMTQ9UBM1 199 aa9.99□□□□□ -0.81
CSTF2-201ENST00000372972 C14orf178Q8N769 122 aaPredicted RBP9.98□□□□□ -0.81
CSTF2-201ENST00000372972 MRPS16Q9Y3D3 137 aaKnown RBP9.98□□□□□ -0.81
CSTF2-201ENST00000372972 IGKV3-20P01619 116 aa9.97□□□□□ -0.81
CSTF2-201ENST00000372972 NUTF2P61970 127 aaKnown RBP9.97□□□□□ -0.81
CSTF2-201ENST00000372972 KHDC1LQ5JSQ8 128 aa9.97□□□□□ -0.81
CSTF2-201ENST00000372972 FOXI2Q6ZQN5 318 aa9.97□□□□□ -0.81
CSTF2-201ENST00000372972 TMEM160Q9NX00 188 aa9.97□□□□□ -0.81
CSTF2-201ENST00000372972 NXPH4O95158 308 aa9.97□□□□□ -0.81
CSTF2-201ENST00000372972 CDKN1BP46527 198 aa9.97□□□□□ -0.81
CSTF2-201ENST00000372972 OR9G4Q8NGQ1 327 aa9.97□□□□□ -0.81
CSTF2-201ENST00000372972 AP1S3Q96PC3 154 aa9.97□□□□□ -0.81
CSTF2-201ENST00000372972 GOLT1BQ9Y3E0 138 aa9.97□□□□□ -0.81
CSTF2-201ENST00000372972 LY6G6DO95868 133 aa9.96□□□□□ -0.81
CSTF2-201ENST00000372972 CD7P09564 240 aa9.96□□□□□ -0.81
CSTF2-201ENST00000372972 LAGE3Q14657 143 aa9.96□□□□□ -0.81
CSTF2-201ENST00000372972 KLHL30-AS1Q8NEE0 82 aa9.96□□□□□ -0.81
CSTF2-201ENST00000372972 TMEM158Q8WZ71 300 aa9.96□□□□□ -0.81
CSTF2-201ENST00000372972 NOTCH2Q04721 2471 aa9.96□□□□□ -0.81
CSTF2-201ENST00000372972 TRAV12-2A0A075B6T6 113 aa9.95□□□□□ -0.82
CSTF2-201ENST00000372972 BATFQ16520 125 aa9.95□□□□□ -0.82
CSTF2-201ENST00000372972 DUX3Q96PT4 197 aa9.95□□□□□ -0.82
CSTF2-201ENST00000372972 TRAV2A0A0B4J234 112 aa9.95□□□□□ -0.82
CSTF2-201ENST00000372972 SCGB2A2Q13296 93 aa9.95□□□□□ -0.82
CSTF2-201ENST00000372972 SLC25A34Q6PIV7 304 aa9.95□□□□□ -0.82
CSTF2-201ENST00000372972 RASL10AQ92737 203 aa9.95□□□□□ -0.82
CSTF2-201ENST00000372972 DLX4Q92988 240 aaPredicted RBP9.95□□□□□ -0.82
CSTF2-201ENST00000372972 C18orf15Q96N68 181 aa9.95□□□□□ -0.82
CSTF2-201ENST00000372972 C20orf78Q9BR46 151 aa9.95□□□□□ -0.82
CSTF2-201ENST00000372972 MGPP08493 103 aa9.94□□□□□ -0.82
CSTF2-201ENST00000372972 SPINK13Q1W4C9 94 aa9.94□□□□□ -0.82
CSTF2-201ENST00000372972 POM121L12Q8N7R1 296 aa9.94□□□□□ -0.82
CSTF2-201ENST00000372972 SMIM2Q9BVW6 85 aa9.94□□□□□ -0.82
CSTF2-201ENST00000372972 TCAPO15273 167 aa9.94□□□□□ -0.82
CSTF2-201ENST00000372972 PPP1R17O96001 155 aa9.94□□□□□ -0.82
CSTF2-201ENST00000372972 SMIM17P0DL12 118 aa9.94□□□□□ -0.82
CSTF2-201ENST00000372972 SUMO2P61956 95 aaKnown RBP9.94□□□□□ -0.82
CSTF2-201ENST00000372972 AMTNQ6UX39 209 aa9.94□□□□□ -0.82
CSTF2-201ENST00000372972 KIF25-AS1Q9Y6Z4 181 aa9.94□□□□□ -0.82
CSTF2-201ENST00000372972 IGHV1OR15-1A0A075B7D0 117 aa9.93□□□□□ -0.82
CSTF2-201ENST00000372972 IGHV3-16A0A0C4DH30 117 aa9.93□□□□□ -0.82
CSTF2-201ENST00000372972 RNASE1P07998 156 aaKnown RBP9.93□□□□□ -0.82
CSTF2-201ENST00000372972 ZNF418Q8TF45 676 aaPredicted RBP9.93□□□□□ -0.82
CSTF2-201ENST00000372972 ATP5LO75964 103 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 LINC00315P59091 139 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 DEFB131AP59861 70 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 COL5A1-AS1Q5SY13 56 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 TMEM61Q8N0U2 210 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
CSTF2-201ENST00000372972 C9orf85Q96MD7 179 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 ZMAT5Q9UDW3 170 aaKnown RBP9.92□□□□□ -0.82
CSTF2-201ENST00000372972 MTORP42345 2549 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 OTOGQ6ZRI0 2925 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 ANK3Q12955 4377 aaKnown RBP9.92□□□□□ -0.82
CSTF2-201ENST00000372972 K7EMI3 77 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 PRSS1P07477 247 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 Q8N1Y9 231 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 DYNLRB2Q8TF09 96 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 MDFICQ9P1T7 246 aa9.92□□□□□ -0.82
CSTF2-201ENST00000372972 KNCNA6PVL3 124 aa9.91□□□□□ -0.82
CSTF2-201ENST00000372972 COX8AP10176 69 aa9.91□□□□□ -0.82
CSTF2-201ENST00000372972 HLA-DRB4P13762 266 aa9.91□□□□□ -0.82
CSTF2-201ENST00000372972 HILS1P60008 231 aa9.91□□□□□ -0.82
CSTF2-201ENST00000372972 DEFB114Q30KQ6 69 aa9.91□□□□□ -0.82
CSTF2-201ENST00000372972 ORMDL2Q53FV1 153 aa9.91□□□□□ -0.82
CSTF2-201ENST00000372972 HIST2H2BDQ6DRA6 164 aa9.91□□□□□ -0.82
CSTF2-201ENST00000372972 DKK2Q9UBU2 259 aa9.91□□□□□ -0.82
CSTF2-201ENST00000372972 HLA-DRB4X5D2U9 266 aa9.91□□□□□ -0.82
CSTF2-201ENST00000372972 A8MTW9 85 aa9.9□□□□□ -0.82
CSTF2-201ENST00000372972 NUDT3O95989 172 aa9.9□□□□□ -0.82
CSTF2-201ENST00000372972 HINT1P49773 126 aaPredicted RBP9.9□□□□□ -0.82
CSTF2-201ENST00000372972 SYT8Q8NBV8 401 aa9.9□□□□□ -0.82
CSTF2-201ENST00000372972 JPT2Q9H910 190 aa9.9□□□□□ -0.82
CSTF2-201ENST00000372972 HIVEP2P31629 2446 aa9.9□□□□□ -0.82
CSTF2-201ENST00000372972 H3BMM0 161 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms