RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 SLC50A1Q9BRV3 221 aa13.86□□□□□ -0.19
VEGFA-206ENST00000372077 SIGLEC8Q9NYZ4 499 aa13.86□□□□□ -0.19
VEGFA-206ENST00000372077 A0A1B0GUT8 65 aa13.85□□□□□ -0.19
VEGFA-206ENST00000372077 D6R8Y8 96 aa13.85□□□□□ -0.19
VEGFA-206ENST00000372077 NUDT3O95989 172 aa13.85□□□□□ -0.19
VEGFA-206ENST00000372077 AAMDCQ9H7C9 122 aa13.85□□□□□ -0.19
VEGFA-206ENST00000372077 MRPS16Q9Y3D3 137 aaKnown RBP13.85□□□□□ -0.19
VEGFA-206ENST00000372077 TRAV8-2A0A0B4J237 113 aa13.84□□□□□ -0.19
VEGFA-206ENST00000372077 SOCS3O14543 225 aa13.84□□□□□ -0.19
VEGFA-206ENST00000372077 C18orf15Q96N68 181 aa13.84□□□□□ -0.19
VEGFA-206ENST00000372077 ZNF747Q9BV97 191 aa13.84□□□□□ -0.19
VEGFA-206ENST00000372077 ZNF80P51504 273 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-206ENST00000372077 DEFB104AQ8WTQ1 72 aa13.84□□□□□ -0.19
VEGFA-206ENST00000372077 SORL1Q92673 2214 aa13.83□□□□□ -0.19
VEGFA-206ENST00000372077 RPL11P62913 178 aaKnown RBP13.83□□□□□ -0.2
VEGFA-206ENST00000372077 PSG3Q16557 428 aa13.83□□□□□ -0.2
VEGFA-206ENST00000372077 PRAC2D3DTV9 90 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 LINC00482Q8N8I6 264 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 TMEM158Q8WZ71 300 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 IGKV3-7A0A075B6H7 116 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 CT45A10P0DMU9 189 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 EVI2AP22794 236 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 DEFB1P60022 68 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 ATP5L2Q7Z4Y8 100 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 SH2D1AO60880 128 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 ORM1P02763 201 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 DEFB114Q30KQ6 69 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 DCANP1Q8TF63 244 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 C16orf92Q96LL3 132 aa13.82□□□□□ -0.2
VEGFA-206ENST00000372077 PF4P02776 101 aa13.81□□□□□ -0.2
VEGFA-206ENST00000372077 TWIST1Q15672 202 aa13.81□□□□□ -0.2
VEGFA-206ENST00000372077 FA2HQ7L5A8 372 aa13.81□□□□□ -0.2
VEGFA-206ENST00000372077 MS4A6AQ9H2W1 248 aa13.81□□□□□ -0.2
VEGFA-206ENST00000372077 GATA1P15976 413 aaPredicted RBP13.81□□□□□ -0.2
VEGFA-206ENST00000372077 RASL11AQ6T310 242 aa13.81□□□□□ -0.2
VEGFA-206ENST00000372077 MRPL53Q96EL3 112 aaKnown RBP13.81□□□□□ -0.2
VEGFA-206ENST00000372077 SAMD13Q5VXD3 122 aa13.8□□□□□ -0.2
VEGFA-206ENST00000372077 AP5S1Q9NUS5 200 aa13.8□□□□□ -0.2
VEGFA-206ENST00000372077 TMEM189A5PLL7 270 aa13.8□□□□□ -0.2
VEGFA-206ENST00000372077 DYNLRB2Q8TF09 96 aa13.8□□□□□ -0.2
VEGFA-206ENST00000372077 MAP1LC3CQ9BXW4 147 aa13.8□□□□□ -0.2
VEGFA-206ENST00000372077 ZNF492Q9P255 531 aa13.79□□□□□ -0.2
VEGFA-206ENST00000372077 CSN1S1P47710 185 aa13.79□□□□□ -0.2
VEGFA-206ENST00000372077 K7EQG2 157 aa13.78□□□□□ -0.2
VEGFA-206ENST00000372077 K7EQM0 130 aa13.78□□□□□ -0.2
VEGFA-206ENST00000372077 OR5AL1P0C617 328 aa13.78□□□□□ -0.2
VEGFA-206ENST00000372077 RPS20P60866 119 aaKnown RBP13.78□□□□□ -0.2
VEGFA-206ENST00000372077 AMMECR1LQ6DCA0 310 aa13.78□□□□□ -0.2
VEGFA-206ENST00000372077 C20orf173Q96LM9 149 aa13.78□□□□□ -0.2
VEGFA-206ENST00000372077 TAX1BP3O14907 124 aa13.77□□□□□ -0.2
VEGFA-206ENST00000372077 C12orf54Q6X4T0 127 aa13.77□□□□□ -0.2
VEGFA-206ENST00000372077 TMEM61Q8N0U2 210 aa13.77□□□□□ -0.2
VEGFA-206ENST00000372077 TTTY13Q9BZ97 58 aa13.77□□□□□ -0.2
VEGFA-206ENST00000372077 ATRQ13535 2644 aa13.77□□□□□ -0.2
VEGFA-206ENST00000372077 FBN1P35555 2871 aaKnown RBP13.77□□□□□ -0.2
VEGFA-206ENST00000372077 TRAV2A0A0B4J234 112 aa13.77□□□□□ -0.21
VEGFA-206ENST00000372077 TRAV25A0A0B4J276 109 aa13.77□□□□□ -0.21
VEGFA-206ENST00000372077 NPIPB6E9PJ23 425 aa13.77□□□□□ -0.21
VEGFA-206ENST00000372077 SAP30O75446 220 aa13.77□□□□□ -0.21
VEGFA-206ENST00000372077 RIGQ13278 110 aa13.77□□□□□ -0.21
VEGFA-206ENST00000372077 CD300EQ496F6 205 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-206ENST00000372077 K7EMI3 77 aa13.77□□□□□ -0.21
VEGFA-206ENST00000372077 C3orf56Q8N813 242 aa13.77□□□□□ -0.21
VEGFA-206ENST00000372077 ID1P41134 155 aa13.76□□□□□ -0.21
VEGFA-206ENST00000372077 SHISA2Q6UWI4 295 aa13.76□□□□□ -0.21
VEGFA-206ENST00000372077 PRELID3AQ96N28 172 aa13.76□□□□□ -0.21
VEGFA-206ENST00000372077 CACNG7P62955 275 aa13.76□□□□□ -0.21
VEGFA-206ENST00000372077 BVES-AS1Q5T3Y7 98 aa13.76□□□□□ -0.21
VEGFA-206ENST00000372077 TENM1Q9UKZ4 2725 aa13.76□□□□□ -0.21
VEGFA-206ENST00000372077 TRBV6-1A0A0K0K1D8 114 aa13.75□□□□□ -0.21
VEGFA-206ENST00000372077 GAGE12BA1L429 117 aa13.75□□□□□ -0.21
VEGFA-206ENST00000372077 TMEM191AQ9H0A3 160 aa13.75□□□□□ -0.21
VEGFA-206ENST00000372077 WNK1Q9H4A3 2382 aa13.75□□□□□ -0.21
VEGFA-206ENST00000372077 NPYP01303 97 aa13.75□□□□□ -0.21
VEGFA-206ENST00000372077 SLC25A34Q6PIV7 304 aa13.75□□□□□ -0.21
VEGFA-206ENST00000372077 NDFIP1Q9BT67 221 aa13.75□□□□□ -0.21
VEGFA-206ENST00000372077 IGLV1-51P01701 117 aa13.74□□□□□ -0.21
VEGFA-206ENST00000372077 TRAV26-2A0A0B4J265 109 aa13.74□□□□□ -0.21
VEGFA-206ENST00000372077 RBAKDNA6NC62 111 aa13.74□□□□□ -0.21
VEGFA-206ENST00000372077 CKS2P33552 79 aa13.74□□□□□ -0.21
VEGFA-206ENST00000372077 MRPL51Q4U2R6 128 aaKnown RBP13.74□□□□□ -0.21
VEGFA-206ENST00000372077 NOTCH3Q9UM47 2321 aa13.74□□□□□ -0.21
VEGFA-206ENST00000372077 CT83Q5H943 113 aa13.73□□□□□ -0.21
VEGFA-206ENST00000372077 OR2K2Q8NGT1 345 aa13.73□□□□□ -0.21
VEGFA-206ENST00000372077 CHCHD1Q96BP2 118 aaKnown RBP13.73□□□□□ -0.21
VEGFA-206ENST00000372077 A0A096LNJ9 63 aa13.73□□□□□ -0.21
VEGFA-206ENST00000372077 SPAG8Q99932 426 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-206ENST00000372077 GFRA4Q9GZZ7 299 aa13.73□□□□□ -0.21
VEGFA-206ENST00000372077 SPATA3Q8NHX4 192 aa13.72□□□□□ -0.21
VEGFA-206ENST00000372077 PRR25Q96S07 402 aa13.72□□□□□ -0.21
VEGFA-206ENST00000372077 FBLL1A6NHQ2 334 aaKnown RBP13.72□□□□□ -0.21
VEGFA-206ENST00000372077 FAM162BQ5T6X4 162 aa13.72□□□□□ -0.21
VEGFA-206ENST00000372077 WFDC9Q8NEX5 89 aa13.72□□□□□ -0.21
VEGFA-206ENST00000372077 TRAV8-6A0A0B4J262 113 aa13.72□□□□□ -0.21
VEGFA-206ENST00000372077 NMUP48645 174 aa13.72□□□□□ -0.21
VEGFA-206ENST00000372077 SNRPD3P62318 126 aaKnown RBP13.72□□□□□ -0.21
VEGFA-206ENST00000372077 ZNF256Q9Y2P7 627 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-206ENST00000372077 RAB37Q96AX2 223 aa13.71□□□□□ -0.21
VEGFA-206ENST00000372077 ZNF688P0C7X2 276 aa13.71□□□□□ -0.22
VEGFA-206ENST00000372077 ST20Q9HBF5 79 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms