RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 PHLDA3Q9Y5J5 127 aa9.51□□□□□ -0.89
LINC01561-201ENST00000369071 SETXQ7Z333 2677 aaKnown RBP9.51□□□□□ -0.89
LINC01561-201ENST00000369071 TLN1Q9Y490 2541 aaKnown RBP9.51□□□□□ -0.89
LINC01561-201ENST00000369071 SVEP1Q4LDE5 3571 aa9.51□□□□□ -0.89
LINC01561-201ENST00000369071 TRAV41A0A0B4J266 112 aa9.5□□□□□ -0.89
LINC01561-201ENST00000369071 S100A4P26447 101 aaKnown RBP9.5□□□□□ -0.89
LINC01561-201ENST00000369071 DEFB1P60022 68 aa9.5□□□□□ -0.89
LINC01561-201ENST00000369071 FOXC1Q12948 553 aa9.5□□□□□ -0.89
LINC01561-201ENST00000369071 UNQ9165/PRO28630Q6UXU0 137 aa9.5□□□□□ -0.89
LINC01561-201ENST00000369071 OR10J6PQ8NGY7 276 aa9.5□□□□□ -0.89
LINC01561-201ENST00000369071 COX6B1P14854 86 aa9.5□□□□□ -0.89
LINC01561-201ENST00000369071 ARL3P36405 182 aa9.5□□□□□ -0.89
LINC01561-201ENST00000369071 MTURNQ8N3F0 131 aa9.5□□□□□ -0.89
LINC01561-201ENST00000369071 POM121L12Q8N7R1 296 aa9.5□□□□□ -0.89
LINC01561-201ENST00000369071 SPTBN2O15020 2390 aa9.49□□□□□ -0.89
LINC01561-201ENST00000369071 MGPP08493 103 aa9.49□□□□□ -0.89
LINC01561-201ENST00000369071 CRIP2P52943 208 aaPredicted RBP9.49□□□□□ -0.89
LINC01561-201ENST00000369071 LMO4P61968 165 aa9.49□□□□□ -0.89
LINC01561-201ENST00000369071 SMAGPQ0VAQ4 97 aa9.49□□□□□ -0.89
LINC01561-201ENST00000369071 TMEM219Q86XT9 240 aa9.49□□□□□ -0.89
LINC01561-201ENST00000369071 APRG1Q8IVJ8 170 aa9.49□□□□□ -0.89
LINC01561-201ENST00000369071 LINC00527Q9UJ94 153 aa9.49□□□□□ -0.89
LINC01561-201ENST00000369071 ZNF815PA8K554 130 aa9.48□□□□□ -0.89
LINC01561-201ENST00000369071 GNRH2O43555 120 aa9.48□□□□□ -0.89
LINC01561-201ENST00000369071 TRBV12-3P01733 135 aa9.48□□□□□ -0.89
LINC01561-201ENST00000369071 CRYGDP07320 174 aa9.48□□□□□ -0.89
LINC01561-201ENST00000369071 RNASE3P12724 160 aaKnown RBP9.48□□□□□ -0.89
LINC01561-201ENST00000369071 PLEKHB2Q96CS7 222 aa9.48□□□□□ -0.89
LINC01561-201ENST00000369071 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
LINC01561-201ENST00000369071 RNASE4P34096 147 aaKnown RBP9.48□□□□□ -0.89
LINC01561-201ENST00000369071 INSL3P51460 131 aa9.48□□□□□ -0.89
LINC01561-201ENST00000369071 UBE2D1P51668 147 aa9.48□□□□□ -0.89
LINC01561-201ENST00000369071 LCNL1Q6ZST4 164 aa9.48□□□□□ -0.89
LINC01561-201ENST00000369071 MOB4Q9Y3A3 225 aa9.48□□□□□ -0.89
LINC01561-201ENST00000369071 NDUFA4O00483 81 aa9.47□□□□□ -0.89
LINC01561-201ENST00000369071 CIDEAO60543 219 aa9.47□□□□□ -0.89
LINC01561-201ENST00000369071 NXPH4O95158 308 aa9.47□□□□□ -0.89
LINC01561-201ENST00000369071 PPP1R17O96001 155 aa9.47□□□□□ -0.89
LINC01561-201ENST00000369071 TSHBP01222 138 aa9.47□□□□□ -0.89
LINC01561-201ENST00000369071 KIF25-AS1Q9Y6Z4 181 aa9.47□□□□□ -0.89
LINC01561-201ENST00000369071 DUSP14O95147 198 aaKnown RBP9.47□□□□□ -0.89
LINC01561-201ENST00000369071 LINC00315P59091 139 aa9.47□□□□□ -0.89
LINC01561-201ENST00000369071 SCGB2A2Q13296 93 aa9.47□□□□□ -0.89
LINC01561-201ENST00000369071 IGLV4-69A0A075B6H9 119 aa9.46□□□□□ -0.89
LINC01561-201ENST00000369071 F6UB75 175 aa9.46□□□□□ -0.89
LINC01561-201ENST00000369071 RPL32P62910 135 aaKnown RBP9.46□□□□□ -0.89
LINC01561-201ENST00000369071 CFAP126Q5VTH2 177 aa9.46□□□□□ -0.89
LINC01561-201ENST00000369071 MRPL16Q9NX20 251 aaKnown RBP9.46□□□□□ -0.89
LINC01561-201ENST00000369071 IGHV4OR15-8A0A075B7B6 117 aa9.46□□□□□ -0.9
LINC01561-201ENST00000369071 A0A087WW49 117 aa9.46□□□□□ -0.9
LINC01561-201ENST00000369071 IGHV1-69DA0A0B4J2H0 117 aa9.46□□□□□ -0.9
LINC01561-201ENST00000369071 TRBV7-9A0A0J9YWB2 115 aa9.46□□□□□ -0.9
LINC01561-201ENST00000369071 LINC01549A6NIU2 74 aa9.46□□□□□ -0.9
LINC01561-201ENST00000369071 SMCPP49901 116 aaPredicted RBP9.46□□□□□ -0.9
LINC01561-201ENST00000369071 SCGB1D4Q6XE38 83 aa9.46□□□□□ -0.9
LINC01561-201ENST00000369071 KLHL30-AS1Q8NEE0 82 aa9.46□□□□□ -0.9
LINC01561-201ENST00000369071 BPESC1Q9GZL8 116 aa9.46□□□□□ -0.9
LINC01561-201ENST00000369071 IGIPA6NJ69 53 aa9.45□□□□□ -0.9
LINC01561-201ENST00000369071 C11orf86A6NJI1 115 aa9.45□□□□□ -0.9
LINC01561-201ENST00000369071 NDUFS8O00217 210 aa9.45□□□□□ -0.9
LINC01561-201ENST00000369071 TSPAN13O95857 204 aa9.45□□□□□ -0.9
LINC01561-201ENST00000369071 CD7P09564 240 aa9.45□□□□□ -0.9
LINC01561-201ENST00000369071 PTPRQQ9UMZ3 2332 aa9.44□□□□□ -0.9
LINC01561-201ENST00000369071 KLRB1Q12918 225 aa9.44□□□□□ -0.9
LINC01561-201ENST00000369071 SRSF9Q13242 221 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC01561-201ENST00000369071 DLX4Q92988 240 aaPredicted RBP9.44□□□□□ -0.9
LINC01561-201ENST00000369071 ASH1LQ9NR48 2969 aaKnown RBP9.44□□□□□ -0.9
LINC01561-201ENST00000369071 APOMO95445 188 aa9.44□□□□□ -0.9
LINC01561-201ENST00000369071 POLR2KP53803 58 aaKnown RBP9.44□□□□□ -0.9
LINC01561-201ENST00000369071 UBE2D3P61077 147 aa9.44□□□□□ -0.9
LINC01561-201ENST00000369071 UBE2D2P62837 147 aa9.44□□□□□ -0.9
LINC01561-201ENST00000369071 ATP6V0E2Q8NHE4 81 aa9.44□□□□□ -0.9
LINC01561-201ENST00000369071 UBTD1Q9HAC8 227 aa9.44□□□□□ -0.9
LINC01561-201ENST00000369071 TP53TG1Q9Y2A0 90 aa9.44□□□□□ -0.9
LINC01561-201ENST00000369071 MED13LQ71F56 2210 aa9.43□□□□□ -0.9
LINC01561-201ENST00000369071 IGHV3OR16-10A0A075B7F0 116 aa9.43□□□□□ -0.9
LINC01561-201ENST00000369071 A0A0J9YY99 117 aa9.43□□□□□ -0.9
LINC01561-201ENST00000369071 FOXI1Q12951 378 aa9.43□□□□□ -0.9
LINC01561-201ENST00000369071 PAPPA-AS1Q5QFB9 102 aa9.43□□□□□ -0.9
LINC01561-201ENST00000369071 ZFP2Q6ZN57 461 aa9.43□□□□□ -0.9
LINC01561-201ENST00000369071 C1QTNF4Q9BXJ3 329 aa9.43□□□□□ -0.9
LINC01561-201ENST00000369071 ZFHX3Q15911 3703 aa9.43□□□□□ -0.9
LINC01561-201ENST00000369071 BRI3O95415 125 aa9.43□□□□□ -0.9
LINC01561-201ENST00000369071 PMVKQ15126 192 aa9.43□□□□□ -0.9
LINC01561-201ENST00000369071 KLLNB2CW77 178 aa9.42□□□□□ -0.9
LINC01561-201ENST00000369071 RPL11P62913 178 aaKnown RBP9.42□□□□□ -0.9
LINC01561-201ENST00000369071 SUMO4Q6EEV6 95 aa9.42□□□□□ -0.9
LINC01561-201ENST00000369071 JPT2Q9H910 190 aa9.42□□□□□ -0.9
LINC01561-201ENST00000369071 MUC4Q99102 2169 aa9.42□□□□□ -0.9
LINC01561-201ENST00000369071 IGHV3-11P01762 117 aa9.41□□□□□ -0.9
LINC01561-201ENST00000369071 PSMB2P49721 201 aa9.41□□□□□ -0.9
LINC01561-201ENST00000369071 EMP1P54849 157 aa9.41□□□□□ -0.9
LINC01561-201ENST00000369071 HERVK_113P61574 105 aa9.41□□□□□ -0.9
LINC01561-201ENST00000369071 NDUFA11Q86Y39 141 aa9.41□□□□□ -0.9
LINC01561-201ENST00000369071 TMEM141Q96I45 108 aa9.41□□□□□ -0.9
LINC01561-201ENST00000369071 USMG5Q96IX5 58 aa9.41□□□□□ -0.9
LINC01561-201ENST00000369071 IGKV3-7A0A075B6H7 116 aa9.41□□□□□ -0.9
LINC01561-201ENST00000369071 LOC107984156A0A0G2JMH3 177 aa9.41□□□□□ -0.9
LINC01561-201ENST00000369071 IGHV1-69P01742 117 aa9.41□□□□□ -0.9
LINC01561-201ENST00000369071 TSPEAR-AS2P59090 65 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms