RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 PHLDA1Q8WV24 401 aaPredicted RBP10.75□□□□□ -0.69
CD48-201ENST00000368045 RPL39LQ96EH5 51 aaKnown RBP10.75□□□□□ -0.69
CD48-201ENST00000368045 ODF3Q96PU9 254 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 OR11H12B2RN74 326 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 B4DSR2 109 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 F6UB75 175 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 GNRH2O43555 120 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 DSCR9P59020 149 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 MAPKAPK5-AS1Q8N8E1 139 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 OR11H1Q8NG94 326 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 OR11H2Q8NH07 326 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 VPS25Q9BRG1 176 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 KIF25-AS1Q9Y6Z4 181 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 CACNA1BQ00975 2339 aa10.74□□□□□ -0.69
CD48-201ENST00000368045 DEFB1P60022 68 aa10.74□□□□□ -0.69
CD48-201ENST00000368045 NAA38Q9BRA0 125 aaKnown RBP10.74□□□□□ -0.69
CD48-201ENST00000368045 MYMXA0A1B0GTQ4 84 aa10.73□□□□□ -0.69
CD48-201ENST00000368045 FAM159AQ6UWV7 190 aa10.73□□□□□ -0.69
CD48-201ENST00000368045 BAALCQ8WXS3 180 aa10.73□□□□□ -0.69
CD48-201ENST00000368045 CSTL1Q9H114 145 aa10.73□□□□□ -0.69
CD48-201ENST00000368045 LINC00315P59091 139 aa10.72□□□□□ -0.69
CD48-201ENST00000368045 Q6ZS46 218 aa10.72□□□□□ -0.69
CD48-201ENST00000368045 NEGR1Q7Z3B1 354 aa10.72□□□□□ -0.69
CD48-201ENST00000368045 DCANP1Q8TF63 244 aa10.72□□□□□ -0.69
CD48-201ENST00000368045 NHP2Q9NX24 153 aaKnown RBP10.72□□□□□ -0.69
CD48-201ENST00000368045 ABCA2Q9BZC7 2435 aa10.72□□□□□ -0.69
CD48-201ENST00000368045 RELNP78509 3460 aa10.72□□□□□ -0.69
CD48-201ENST00000368045 E9PLD3 99 aa10.72□□□□□ -0.69
CD48-201ENST00000368045 PSMB8P28062 276 aa10.72□□□□□ -0.69
CD48-201ENST00000368045 PAPPA-AS1Q5QFB9 102 aa10.72□□□□□ -0.69
CD48-201ENST00000368045 CYSLTR1Q9Y271 337 aa10.72□□□□□ -0.69
CD48-201ENST00000368045 IGKV3-7A0A075B6H7 116 aa10.71□□□□□ -0.69
CD48-201ENST00000368045 PRSS29PA6NIE9 313 aa10.71□□□□□ -0.69
CD48-201ENST00000368045 SPRY2O43597 315 aa10.71□□□□□ -0.69
CD48-201ENST00000368045 HIST1H4GQ99525 98 aa10.71□□□□□ -0.69
CD48-201ENST00000368045 TRBV7-3A0A075B6L6 115 aa10.7□□□□□ -0.7
CD48-201ENST00000368045 LCNL1Q6ZST4 164 aa10.7□□□□□ -0.7
CD48-201ENST00000368045 A0A1B0GWB2 263 aa10.7□□□□□ -0.7
CD48-201ENST00000368045 K7ERJ3 54 aa10.7□□□□□ -0.7
CD48-201ENST00000368045 VCYO14598 125 aa10.7□□□□□ -0.7
CD48-201ENST00000368045 POLR2KP53803 58 aaKnown RBP10.7□□□□□ -0.7
CD48-201ENST00000368045 C21orf62-AS1Q17RA5 79 aa10.7□□□□□ -0.7
CD48-201ENST00000368045 TMEM141Q96I45 108 aa10.7□□□□□ -0.7
CD48-201ENST00000368045 TRBV6-5A0A0K0K1A5 114 aa10.69□□□□□ -0.7
CD48-201ENST00000368045 IGLL5B9A064 214 aa10.69□□□□□ -0.7
CD48-201ENST00000368045 C12orf74Q32Q52 190 aa10.69□□□□□ -0.7
CD48-201ENST00000368045 G3V4G9 280 aa10.68□□□□□ -0.7
CD48-201ENST00000368045 LGALS9O00182 355 aa10.68□□□□□ -0.7
CD48-201ENST00000368045 SRD5A1P18405 259 aa10.68□□□□□ -0.7
CD48-201ENST00000368045 SNRPD3P62318 126 aaKnown RBP10.68□□□□□ -0.7
CD48-201ENST00000368045 SUMO4Q6EEV6 95 aa10.68□□□□□ -0.7
CD48-201ENST00000368045 C9orf85Q96MD7 179 aa10.68□□□□□ -0.7
CD48-201ENST00000368045 TIMM17AQ99595 171 aa10.68□□□□□ -0.7
CD48-201ENST00000368045 KIR2DL4Q99706 377 aa10.68□□□□□ -0.7
CD48-201ENST00000368045 J3QLI3 93 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 SAP30O75446 220 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 AVPP01185 164 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 LGALS1P09382 135 aaKnown RBP10.67□□□□□ -0.7
CD48-201ENST00000368045 CD7P09564 240 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 RIPPLY3P57055 190 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 SYT8Q8NBV8 401 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 PRADC1Q9BSG0 188 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 A0A0J9YX75 114 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 IGIPA6NJ69 53 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 HERVK_113P61574 105 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 ZFP2Q6ZN57 461 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 LINC01356Q8N9X3 169 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 ZNF479Q96JC4 524 aa10.67□□□□□ -0.7
CD48-201ENST00000368045 TRAV12-3A0A0B4J271 114 aa10.66□□□□□ -0.7
CD48-201ENST00000368045 IGHV3-16A0A0C4DH30 117 aa10.66□□□□□ -0.7
CD48-201ENST00000368045 TRBV27A0A0K0K1C4 114 aa10.66□□□□□ -0.7
CD48-201ENST00000368045 K7EQG2 157 aa10.66□□□□□ -0.7
CD48-201ENST00000368045 DUSP14O95147 198 aaKnown RBP10.66□□□□□ -0.7
CD48-201ENST00000368045 COTL1Q14019 142 aa10.66□□□□□ -0.7
CD48-201ENST00000368045 PMVKQ15126 192 aa10.66□□□□□ -0.7
CD48-201ENST00000368045 FOXI2Q6ZQN5 318 aa10.66□□□□□ -0.7
CD48-201ENST00000368045 RNF152Q8N8N0 203 aa10.66□□□□□ -0.7
CD48-201ENST00000368045 TP53TG1Q9Y2A0 90 aa10.66□□□□□ -0.7
CD48-201ENST00000368045 TMEM238LA0A1B0GVL6 79 aa10.65□□□□□ -0.7
CD48-201ENST00000368045 A6NJY4 79 aa10.65□□□□□ -0.7
CD48-201ENST00000368045 RRN3P1Q2M238 152 aa10.65□□□□□ -0.7
CD48-201ENST00000368045 DEFB112Q30KQ8 113 aa10.65□□□□□ -0.7
CD48-201ENST00000368045 AKAP6Q13023 2319 aa10.65□□□□□ -0.7
CD48-201ENST00000368045 IGHV4-59P01825 116 aa10.65□□□□□ -0.71
CD48-201ENST00000368045 CRYGDP07320 174 aa10.65□□□□□ -0.71
CD48-201ENST00000368045 COX6B1P14854 86 aa10.65□□□□□ -0.71
CD48-201ENST00000368045 EDN2P20800 178 aa10.65□□□□□ -0.71
CD48-201ENST00000368045 SCGB2A2Q13296 93 aa10.65□□□□□ -0.71
CD48-201ENST00000368045 TMEM95Q3KNT9 176 aa10.65□□□□□ -0.71
CD48-201ENST00000368045 SDHAF1A6NFY7 115 aa10.64□□□□□ -0.71
CD48-201ENST00000368045 ZNF815PA8K554 130 aa10.64□□□□□ -0.71
CD48-201ENST00000368045 F5H697 171 aa10.64□□□□□ -0.71
CD48-201ENST00000368045 F8W1H4 67 aa10.64□□□□□ -0.71
CD48-201ENST00000368045 TSHBP01222 138 aa10.64□□□□□ -0.71
CD48-201ENST00000368045 ZNF688P0C7X2 276 aa10.64□□□□□ -0.71
CD48-201ENST00000368045 RHOHQ15669 191 aa10.64□□□□□ -0.71
CD48-201ENST00000368045 JPT2Q9H910 190 aa10.64□□□□□ -0.71
CD48-201ENST00000368045 CSMD1Q96PZ7 3565 aa10.63□□□□□ -0.71
CD48-201ENST00000368045 IGLV4-69A0A075B6H9 119 aa10.63□□□□□ -0.71
CD48-201ENST00000368045 IGHV1OR15-1A0A075B7D0 117 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms