RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 IGHV3-30-5P0DP03 117 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 EGR2P11161 476 aaPredicted RBP7.07□□□□□ -1.28
SYNE1-205ENST00000367251 PPDPFLQ8WWR9 84 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 CAMK2N2Q96S95 79 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 UBL5Q9BZL1 73 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 TMEM131Q92545 1883 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 IGLV11-55A0A075B6I3 123 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 XCL1P47992 114 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 TRAV12-2A0A075B6T6 113 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 CRYGCP07315 174 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 WI2-2373I1.2A0A1W2PRP0 233 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 FOXI2Q6ZQN5 318 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 FAM167A-AS1Q96KT0 104 aa7.07□□□□□ -1.28
SYNE1-205ENST00000367251 MRPL35Q9NZE8 188 aaKnown RBP7.07□□□□□ -1.28
SYNE1-205ENST00000367251 PCNX2A6NKB5 2137 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 IGHV4-4A0A075B6R2 117 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 ATP5G1P05496 136 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 ZFP36P26651 326 aaKnown RBP7.06□□□□□ -1.28
SYNE1-205ENST00000367251 LINC00574Q9H8X3 128 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 NOP10Q9NPE3 64 aaKnown RBP7.06□□□□□ -1.28
SYNE1-205ENST00000367251 ICOSQ9Y6W8 199 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 TRAV12-1A0A0B4J245 112 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 K7EP13 123 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 SEC61GP60059 68 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 MRPL23Q16540 153 aaKnown RBP7.06□□□□□ -1.28
SYNE1-205ENST00000367251 C5orf47Q569G3 176 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 PATE2Q6UY27 113 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 ACACBO00763 2458 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 K7EIM0 57 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 RNF152Q8N8N0 203 aa7.06□□□□□ -1.28
SYNE1-205ENST00000367251 FAM120AOSQ5T036 256 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 C9orf153Q5TBE3 101 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 C9JAW5 83 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 MED14OSP0DP75 135 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 DYNAPQ8N1N2 210 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 AGPAT4-IT1Q9H0P7 198 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 ESM1Q9NQ30 184 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 DEFB125Q8N687 156 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 NPSP0C0P6 89 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 ODF3L1Q8IXM7 274 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 PRO1854Q9UHT4 67 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 CENPVL3A0A0U1RRI6 287 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 HERVK_113P63121 156 aa7.05□□□□□ -1.28
SYNE1-205ENST00000367251 MED12Q93074 2177 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 SPINK8P0C7L1 97 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 HLA-DMBP28068 263 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 GTSF1Q8WW33 167 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 IGHV4-28A0A0C4DH34 117 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 VPREB3Q9UKI3 123 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 C2orf16Q68DN1 1984 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 PTPN13Q12923 2485 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 DEFB112Q30KQ8 113 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 SPRNQ5BIV9 151 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 TRAV26-2A0A0B4J265 109 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 IGKV1-17P01599 117 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 UTF1Q5T230 341 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 C17orf77Q96MU5 243 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 MED13LQ71F56 2210 aa7.04□□□□□ -1.28
SYNE1-205ENST00000367251 CFHR4Q92496 578 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 FER1L5A0AVI2 2057 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 J3QQQ9 107 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 FUSP35637 526 aaKnown RBP eCLIP7.03□□□□□ -1.28
SYNE1-205ENST00000367251 PRSS33Q8NF86 280 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 IGHV7-81A0A0B4J1V7 117 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 IGHV4-59P01825 116 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 GTSF1LQ9H1H1 148 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 HIGD1BQ9P298 99 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 MUC22E2RYF6 1773 aaPredicted RBP7.03□□□□□ -1.28
SYNE1-205ENST00000367251 TMEM89A2RUT3 159 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 FSTL3O95633 263 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 IGLV1-47P01700 117 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 DEFB136Q30KP8 78 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 NDUFA12Q9UI09 145 aa7.03□□□□□ -1.28
SYNE1-205ENST00000367251 MUC6Q6W4X9 2439 aa7.02□□□□□ -1.28
SYNE1-205ENST00000367251 PRSS47A8MTI9 375 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 TEX22C9J3V5 150 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 C16orf54Q6UWD8 224 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 DKK2Q9UBU2 259 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 KMT2EQ8IZD2 1858 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 IGLV10-54A0A075B6I4 117 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 C12orf74Q32Q52 190 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 CTSGP08311 255 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 IGHG4P01861 327 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 CRIP3Q6Q6R5 217 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 C9orf47Q6ZRZ4 202 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 TRAV13-2A0A0B4J235 113 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 WT1P19544 449 aaPredicted RBP7.02□□□□□ -1.29
SYNE1-205ENST00000367251 CTRLP40313 264 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 TMEM258P61165 79 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 FBXL19-AS1Q494R0 122 aa7.02□□□□□ -1.29
SYNE1-205ENST00000367251 K7EMT4 169 aa7.01□□□□□ -1.29
SYNE1-205ENST00000367251 PRB2P02812 416 aaPredicted RBP7.01□□□□□ -1.29
SYNE1-205ENST00000367251 DOCK9Q9BZ29 2069 aa7.01□□□□□ -1.29
SYNE1-205ENST00000367251 GYPEP15421 78 aa7.01□□□□□ -1.29
SYNE1-205ENST00000367251 EIF4EBP1Q13541 118 aaPredicted RBP7.01□□□□□ -1.29
SYNE1-205ENST00000367251 KIAA2026Q5HYC2 2103 aa7.01□□□□□ -1.29
SYNE1-205ENST00000367251 SEM1Q6ZVN7 128 aa7.01□□□□□ -1.29
SYNE1-205ENST00000367251 SH2D6Q7Z4S9 175 aa7.01□□□□□ -1.29
SYNE1-205ENST00000367251 CDPF1Q6NVV7 123 aa7□□□□□ -1.29
SYNE1-205ENST00000367251 C19orf71A6NCJ1 209 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms