RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 MRPL23Q16540 153 aaKnown RBP3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 GCSAMLQ5JQS6 135 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 MUC21Q5SSG8 566 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 IBA57Q5T440 356 aaKnown RBP3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 TMEM78Q5T7P6 136 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 NEGR1Q7Z3B1 354 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 C12orf45Q8N5I9 185 aaPredicted RBP3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 ZFAND2AQ8N6M9 145 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 Q8TAT8 98 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 LINC00477Q96M19 166 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 SDHCQ99643 169 aaPredicted RBP3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 SEC22CQ9BRL7 303 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 LINC00467Q9BRT7 94 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 C20orf85Q9H1P6 137 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 C11orf1Q9H5F2 150 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 TMEM14CQ9P0S9 112 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 PRELID1Q9Y255 219 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 LY96Q9Y6Y9 160 aa3.47□□□□□ -1.85
RNU4-4P-201ENST00000364588 TRAV6A0A075B6T7 132 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 TRAV9-2A0A087WT02 112 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 K7EQD1 137 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 OR10J4P0C629 311 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 IL7P13232 177 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 CRISP2P16562 243 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 PVALBP20472 110 aaPredicted RBP3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 SRIP30626 198 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 SULT1A1P50225 295 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 SLAQ13239 276 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 PDE6HQ13956 83 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 VWC2Q2TAL6 325 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 MIR17HGQ75NE6 70 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 TMEM252Q8N6L7 170 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 PCNPQ8WW12 178 aaKnown RBP3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 C2orf50Q96LR7 162 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 SLC25A2Q9BXI2 301 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 MRPL32Q9BYC8 188 aaKnown RBP3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 GPN1Q9HCN4 374 aaPredicted RBP3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 RPS10P5Q9NQ39 176 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 ZNF492Q9P255 531 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 FAT1Q14517 4588 aa3.46□□□□□ -1.86
RNU4-4P-201ENST00000364588 LOC100131303A0A0U1RQF7 123 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 PLA2G10O15496 165 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 TCRBP04435 133 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 CRYGDP07320 174 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 NMBP08949 121 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 NBEAP1P0C6P0 100 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 EVI2AP22794 236 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 S100A11P31949 105 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 ZNF138P52744 262 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 HBG1P69891 147 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 HBG2P69892 147 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 TMEM183BQ1AE95 376 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 STX12Q86Y82 276 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 TMEM183AQ8IXX5 376 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 Q8NBF4 154 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 RASL10AQ92737 203 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 PHYHIPLQ96FC7 376 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 FAM167A-AS1Q96KT0 104 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 NPCDR1Q9BY65 106 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 SLC25A31Q9H0C2 315 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 LYRM2Q9NU23 88 aaPredicted RBP3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 NUDT15Q9NV35 164 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 NAGKQ9UJ70 344 aa3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 FLG2Q5D862 2391 aaPredicted RBP3.45□□□□□ -1.86
RNU4-4P-201ENST00000364588 VPS13BQ7Z7G8 4022 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 IGHV3-16A0A0C4DH30 117 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 C9JCJ5 164 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 LYRM1O43325 122 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 PSCAO43653 123 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 OR7C2O60412 319 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 RANP62826 216 aaKnown RBP3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 ATP6V1FQ16864 119 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 CNPY1Q3B7I2 92 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 NHLRC2Q8NBF2 726 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 OR10G4Q8NGN3 311 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 FXYD5Q96DB9 178 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 TXNDC17Q9BRA2 123 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 PAXXQ9BUH6 204 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 OR51M1Q9H341 326 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 Q9HAA7 133 aa3.44□□□□□ -1.86
RNU4-4P-201ENST00000364588 DMBT1Q9UGM3 2413 aaPredicted RBP3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 TRAV4A0A0B4J268 109 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 IGHV3-38A0A0C4DH36 116 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 LRCOL1A6NCL2 159 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 K7EP13 123 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 GNRH2O43555 120 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 EIF3GO75821 320 aaKnown RBP eCLIP3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 IGHV3-30P01768 117 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 IGHV3-33P01772 117 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 ORM1P02763 201 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 IGHV3-30-3P0DP02 117 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 IGHV3-30-5P0DP03 117 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 CSN1S1P47710 185 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 PPT1P50897 306 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 UBE2L3P68036 154 aaKnown RBP3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 IL15RAQ13261 267 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 ZNF266Q14584 549 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 LRRC37A5PQ49AS3 106 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 FAM159AQ6UWV7 190 aa3.43□□□□□ -1.86
RNU4-4P-201ENST00000364588 IQCF2Q8IXL9 164 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms