RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 FOXA3P55318 350 aaPredicted RBP12.11□□□□□ -0.47
SDCBP2-202ENST00000360779 ZNF415Q09FC8 603 aa12.11□□□□□ -0.47
SDCBP2-202ENST00000360779 TWIST1Q15672 202 aa12.11□□□□□ -0.47
SDCBP2-202ENST00000360779 TRRAPQ9Y4A5 3859 aa12.1□□□□□ -0.47
SDCBP2-202ENST00000360779 IGHV3-16A0A0C4DH30 117 aa12.1□□□□□ -0.47
SDCBP2-202ENST00000360779 KIR2DL5BA0A0G2JN68 375 aa12.1□□□□□ -0.47
SDCBP2-202ENST00000360779 KIR2DL5BA0A0G2JPC4 375 aa12.1□□□□□ -0.47
SDCBP2-202ENST00000360779 A0A1B0GV90 55 aa12.1□□□□□ -0.47
SDCBP2-202ENST00000360779 GIG44P09565 113 aaPredicted RBP12.1□□□□□ -0.47
SDCBP2-202ENST00000360779 HBBP68871 147 aa12.1□□□□□ -0.47
SDCBP2-202ENST00000360779 KRTAP21-3Q3LHN1 58 aa12.1□□□□□ -0.47
SDCBP2-202ENST00000360779 ATP5L2Q7Z4Y8 100 aa12.1□□□□□ -0.47
SDCBP2-202ENST00000360779 KIR2DL5AQ8N109 375 aa12.1□□□□□ -0.47
SDCBP2-202ENST00000360779 KIR2DL5BQ8NHK3 375 aa12.1□□□□□ -0.47
SDCBP2-202ENST00000360779 M0R381 172 aa12.09□□□□□ -0.47
SDCBP2-202ENST00000360779 PRB2P02812 416 aaPredicted RBP12.09□□□□□ -0.47
SDCBP2-202ENST00000360779 PRM2P04554 102 aa12.09□□□□□ -0.47
SDCBP2-202ENST00000360779 MED14OSP0DP75 135 aa12.09□□□□□ -0.47
SDCBP2-202ENST00000360779 CACNG7P62955 275 aa12.09□□□□□ -0.47
SDCBP2-202ENST00000360779 WDR73Q6P4I2 378 aa12.09□□□□□ -0.47
SDCBP2-202ENST00000360779 OR10AG1Q8NH19 301 aa12.09□□□□□ -0.47
SDCBP2-202ENST00000360779 FRZBQ92765 325 aa12.09□□□□□ -0.47
SDCBP2-202ENST00000360779 SNURFLB1AK76 121 aa12.08□□□□□ -0.48
SDCBP2-202ENST00000360779 SPRY2O43597 315 aa12.08□□□□□ -0.48
SDCBP2-202ENST00000360779 SNAI2O43623 268 aa12.08□□□□□ -0.48
SDCBP2-202ENST00000360779 OR5AL1P0C617 328 aa12.08□□□□□ -0.48
SDCBP2-202ENST00000360779 DEFB135Q30KP9 77 aa12.08□□□□□ -0.48
SDCBP2-202ENST00000360779 LINC00467Q9BRT7 94 aa12.08□□□□□ -0.48
SDCBP2-202ENST00000360779 MDFICQ9P1T7 246 aa12.08□□□□□ -0.48
SDCBP2-202ENST00000360779 IFITM10A6NMD0 228 aa12.07□□□□□ -0.48
SDCBP2-202ENST00000360779 RNASE3P12724 160 aaKnown RBP12.07□□□□□ -0.48
SDCBP2-202ENST00000360779 NTF3P20783 257 aa12.07□□□□□ -0.48
SDCBP2-202ENST00000360779 NDUFA6P56556 154 aa12.07□□□□□ -0.48
SDCBP2-202ENST00000360779 RRN3P1Q2M238 152 aa12.07□□□□□ -0.48
SDCBP2-202ENST00000360779 COX19Q49B96 90 aa12.07□□□□□ -0.48
SDCBP2-202ENST00000360779 SMIM15Q7Z3B0 74 aa12.07□□□□□ -0.48
SDCBP2-202ENST00000360779 ZNF575Q86XF7 245 aa12.07□□□□□ -0.48
SDCBP2-202ENST00000360779 HIST3H2BBQ8N257 126 aa12.07□□□□□ -0.48
SDCBP2-202ENST00000360779 NOTCH3Q9UM47 2321 aa12.07□□□□□ -0.48
SDCBP2-202ENST00000360779 A0A1B0GW15 77 aa12.06□□□□□ -0.48
SDCBP2-202ENST00000360779 SYT8Q8NBV8 401 aa12.06□□□□□ -0.48
SDCBP2-202ENST00000360779 CSNK1G2-AS1Q8NCQ2 148 aa12.06□□□□□ -0.48
SDCBP2-202ENST00000360779 OR10D4PQ8NGN7 298 aa12.06□□□□□ -0.48
SDCBP2-202ENST00000360779 RCHY1Q96PM5 261 aa12.06□□□□□ -0.48
SDCBP2-202ENST00000360779 TRAPPC1Q9Y5R8 145 aa12.06□□□□□ -0.48
SDCBP2-202ENST00000360779 FRMD6-AS1P0C7T7 363 aa12.06□□□□□ -0.48
SDCBP2-202ENST00000360779 DEFB121Q5J5C9 76 aa12.06□□□□□ -0.48
SDCBP2-202ENST00000360779 RASL11AQ6T310 242 aa12.06□□□□□ -0.48
SDCBP2-202ENST00000360779 SSBP4Q9BWG4 385 aaPredicted RBP12.06□□□□□ -0.48
SDCBP2-202ENST00000360779 A0A1B0GXF2 115 aa12.05□□□□□ -0.48
SDCBP2-202ENST00000360779 AZU1P20160 251 aa12.05□□□□□ -0.48
SDCBP2-202ENST00000360779 C9orf85Q96MD7 179 aa12.05□□□□□ -0.48
SDCBP2-202ENST00000360779 A8MZ25 164 aa12.04□□□□□ -0.48
SDCBP2-202ENST00000360779 HLA-DQA1P01909 254 aa12.04□□□□□ -0.48
SDCBP2-202ENST00000360779 MT-ND6P03923 174 aa12.04□□□□□ -0.48
SDCBP2-202ENST00000360779 ZNF705AQ6ZN79 300 aaPredicted RBP12.04□□□□□ -0.48
SDCBP2-202ENST00000360779 MRPL52Q86TS9 123 aaKnown RBP12.04□□□□□ -0.48
SDCBP2-202ENST00000360779 TMEM263Q8WUH6 116 aaKnown RBP12.04□□□□□ -0.48
SDCBP2-202ENST00000360779 C16orf74Q96GX8 76 aa12.04□□□□□ -0.48
SDCBP2-202ENST00000360779 GNB1LQ9BYB4 327 aa12.04□□□□□ -0.48
SDCBP2-202ENST00000360779 MRPL18Q9H0U6 180 aaKnown RBP12.04□□□□□ -0.48
SDCBP2-202ENST00000360779 TCAPO15273 167 aa12.03□□□□□ -0.48
SDCBP2-202ENST00000360779 TRGC1P0CF51 173 aa12.03□□□□□ -0.48
SDCBP2-202ENST00000360779 TMEM136Q6ZRR5 245 aa12.03□□□□□ -0.48
SDCBP2-202ENST00000360779 SPXQ9BT56 116 aa12.03□□□□□ -0.48
SDCBP2-202ENST00000360779 NDUFAF3Q9BU61 184 aa12.03□□□□□ -0.48
SDCBP2-202ENST00000360779 SCRT2Q9NQ03 307 aa12.03□□□□□ -0.48
SDCBP2-202ENST00000360779 MSRB1Q9NZV6 116 aa12.03□□□□□ -0.48
SDCBP2-202ENST00000360779 CBY1Q9Y3M2 126 aa12.03□□□□□ -0.48
SDCBP2-202ENST00000360779 HIST1H2BKO60814 126 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 APCSP02743 223 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 TRGC2P03986 189 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 HIST1H2BJP06899 126 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 HIST1H2BOP23527 126 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 HIST1H2BBP33778 126 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 HIST1H2BDP58876 126 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 HIST1H2BCP62807 126 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 HIST2H2BEQ16778 126 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 KPRPQ5T749 579 aaPredicted RBP12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 HIST1H2BHQ93079 126 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 HIST1H2BNQ99877 126 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 HIST1H2BMQ99879 126 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 CNFNQ9BYD5 112 aa12.02□□□□□ -0.48
SDCBP2-202ENST00000360779 CMYA5Q8N3K9 4069 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 PKD1L1Q8TDX9 2849 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 SMIM17P0DL12 118 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 EMP1P54849 157 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 JOSD1Q15040 202 aaPredicted RBP12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 DMRTA1Q5VZB9 504 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 ZNF493Q6ZR52 646 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 OR11H2Q8NH07 326 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 AP1S3Q96PC3 154 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 IGHV4-4A0A075B6R2 117 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 K7EIL1 84 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 M0R2P5 195 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 ZNF876PQ49A33 203 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 Q6ZWC4 215 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 C11orf72Q8NBR9 251 aa12.01□□□□□ -0.49
SDCBP2-202ENST00000360779 RNASE8Q8TDE3 154 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms