RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 GLMPQ8WWB7 406 aa8.23□□□□□ -1.09
RPE-202ENST00000359429 DPH3P1Q9H4G8 78 aa8.23□□□□□ -1.09
RPE-202ENST00000359429 CELSR1Q9NYQ6 3014 aa8.23□□□□□ -1.09
RPE-202ENST00000359429 VPS13CQ709C8 3753 aa8.22□□□□□ -1.09
RPE-202ENST00000359429 CENPVL3A0A0U1RRI6 287 aa8.22□□□□□ -1.09
RPE-202ENST00000359429 F6UB75 175 aa8.22□□□□□ -1.09
RPE-202ENST00000359429 TRBV12-3P01733 135 aa8.22□□□□□ -1.09
RPE-202ENST00000359429 S100A4P26447 101 aaKnown RBP8.22□□□□□ -1.09
RPE-202ENST00000359429 FBXL19-AS1Q494R0 122 aa8.22□□□□□ -1.09
RPE-202ENST00000359429 WFDC12Q8WWY7 111 aa8.22□□□□□ -1.09
RPE-202ENST00000359429 CDIP1Q9H305 208 aa8.22□□□□□ -1.09
RPE-202ENST00000359429 PHLDA3Q9Y5J5 127 aa8.22□□□□□ -1.09
RPE-202ENST00000359429 CD7P09564 240 aa8.22□□□□□ -1.09
RPE-202ENST00000359429 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.094e-6■■□□□ 11.4
RPE-202ENST00000359429 SYT8Q8NBV8 401 aa8.22□□□□□ -1.09
RPE-202ENST00000359429 SPOCK3Q9BQ16 436 aa8.22□□□□□ -1.09
RPE-202ENST00000359429 TRBV7-1A0A0A6YYK4 115 aa8.21□□□□□ -1.09
RPE-202ENST00000359429 LOC107984156A0A0G2JMH3 177 aa8.21□□□□□ -1.09
RPE-202ENST00000359429 A0A1W2PPR1 153 aa8.21□□□□□ -1.09
RPE-202ENST00000359429 C11orf86A6NJI1 115 aa8.21□□□□□ -1.09
RPE-202ENST00000359429 RNASE3P12724 160 aaKnown RBP8.21□□□□□ -1.09
RPE-202ENST00000359429 PSMB2P49721 201 aa8.21□□□□□ -1.09
RPE-202ENST00000359429 TMEM219Q86XT9 240 aa8.21□□□□□ -1.09
RPE-202ENST00000359429 ARL17AQ8IVW1 177 aa8.21□□□□□ -1.09
RPE-202ENST00000359429 C1QTNF4Q9BXJ3 329 aa8.21□□□□□ -1.09
RPE-202ENST00000359429 IGLV4-69A0A075B6H9 119 aa8.21□□□□□ -1.1
RPE-202ENST00000359429 LCE2BO14633 110 aa8.21□□□□□ -1.1
RPE-202ENST00000359429 Q6ZS46 218 aa8.21□□□□□ -1.1
RPE-202ENST00000359429 DLX4Q92988 240 aaPredicted RBP8.21□□□□□ -1.1
RPE-202ENST00000359429 TRAV21A0A0B4J279 112 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 RNASE4P34096 147 aaKnown RBP8.2□□□□□ -1.1
RPE-202ENST00000359429 ASIPP42127 132 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 UBE2E1P51965 193 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 C9orf139Q6ZV77 190 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 ZNF418Q8TF45 676 aaPredicted RBP8.2□□□□□ -1.1
RPE-202ENST00000359429 JPT2Q9H910 190 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 LENEPQ9Y5L5 61 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 NBASA2RRP1 2371 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 IGKV3-7A0A075B6H7 116 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 A0A1B0GV72 72 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 SOCS3O14543 225 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 TSPEAR-AS2P59090 65 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 UBE2D3P61077 147 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 UBE2D2P62837 147 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 ADORA2A-AS1P86434 159 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 C5orf56Q8N8D9 126 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 LINC00477Q96M19 166 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 CLUHP3Q96NS8 147 aa8.2□□□□□ -1.1
RPE-202ENST00000359429 A0A0J9YY99 117 aa8.19□□□□□ -1.1
RPE-202ENST00000359429 LINC00315P59091 139 aa8.19□□□□□ -1.1
RPE-202ENST00000359429 CKS1BP61024 79 aa8.19□□□□□ -1.1
RPE-202ENST00000359429 RPL39P62891 51 aaKnown RBP8.19□□□□□ -1.1
RPE-202ENST00000359429 CARD19Q96LW7 228 aa8.19□□□□□ -1.1
RPE-202ENST00000359429 NDUFA11Q86Y39 141 aa8.19□□□□□ -1.1
RPE-202ENST00000359429 TP53TG1Q9Y2A0 90 aa8.19□□□□□ -1.1
RPE-202ENST00000359429 IGIPA6NJ69 53 aa8.18□□□□□ -1.1
RPE-202ENST00000359429 TGFAP01135 160 aa8.18□□□□□ -1.1
RPE-202ENST00000359429 MT-ATP8P03928 68 aa8.18□□□□□ -1.1
RPE-202ENST00000359429 ARL3P36405 182 aa8.18□□□□□ -1.1
RPE-202ENST00000359429 OR10J6PQ8NGY7 276 aa8.18□□□□□ -1.1
RPE-202ENST00000359429 KIF25-AS1Q9Y6Z4 181 aa8.18□□□□□ -1.1
RPE-202ENST00000359429 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
RPE-202ENST00000359429 A6NJY4 79 aa8.18□□□□□ -1.1
RPE-202ENST00000359429 TCL1BO95988 128 aa8.18□□□□□ -1.1
RPE-202ENST00000359429 FOXC1Q12948 553 aa8.18□□□□□ -1.1
RPE-202ENST00000359429 FAM19A4Q96LR4 140 aa8.18□□□□□ -1.1
RPE-202ENST00000359429 IGHV3OR16-10A0A075B7F0 116 aa8.17□□□□□ -1.1
RPE-202ENST00000359429 CFC1BP0CG36 223 aa8.17□□□□□ -1.1
RPE-202ENST00000359429 CFC1P0CG37 223 aa8.17□□□□□ -1.1
RPE-202ENST00000359429 ATP6V0E2Q8NHE4 81 aa8.17□□□□□ -1.1
RPE-202ENST00000359429 CEP295Q9C0D2 2601 aa8.17□□□□□ -1.1
RPE-202ENST00000359429 SPTA1P02549 2419 aa8.17□□□□□ -1.1
RPE-202ENST00000359429 TRAV41A0A0B4J266 112 aa8.17□□□□□ -1.1
RPE-202ENST00000359429 XGP55808 180 aa8.17□□□□□ -1.1
RPE-202ENST00000359429 RPL11P62913 178 aaKnown RBP8.17□□□□□ -1.1
RPE-202ENST00000359429 C19orf54Q5BKX5 351 aa8.17□□□□□ -1.1
RPE-202ENST00000359429 TCTEX1D4Q5JR98 221 aa8.17□□□□□ -1.1
RPE-202ENST00000359429 ZNRF2Q8NHG8 242 aa8.17□□□□□ -1.1
RPE-202ENST00000359429 MUC6Q6W4X9 2439 aa8.17□□□□□ -1.1
RPE-202ENST00000359429 K7ENP7 123 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 OVOL1O14753 267 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 IGHV3-30P01768 117 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 IGHV3-30-5P0DP03 117 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 Q5PR19 223 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 POM121L12Q8N7R1 296 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 MUC4Q99102 2169 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 A0A087WWL8 130 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 NPFFO15130 113 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 IGHV3-11P01762 117 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 SPINK8P0C7L1 97 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 SRD5A1P18405 259 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 POLR2KP53803 58 aaKnown RBP8.16□□□□□ -1.1
RPE-202ENST00000359429 AMELXQ99217 191 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 TRAV26-1A0A087WT03 109 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 EDN2P20800 178 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 PMVKQ15126 192 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 SUMO4Q6EEV6 95 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 APRG1Q8IVJ8 170 aa8.16□□□□□ -1.1
RPE-202ENST00000359429 COL12A1Q99715 3063 aa8.15□□□□□ -1.1
RPE-202ENST00000359429 EIF4EBP3O60516 100 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms