RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-203ENST00000359265 HIST1H2BHQ93079 126 aa10.14□□□□□ -0.79
PDLIM5-203ENST00000359265 HIST1H2BNQ99877 126 aa10.14□□□□□ -0.79
PDLIM5-203ENST00000359265 HIST1H2BMQ99879 126 aa10.14□□□□□ -0.79
PDLIM5-203ENST00000359265 MUC21A0A0G2JKD1 596 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 MUC21A0A140T8X8 626 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 GNRH2O43555 120 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 RBMY1A1P0DJD3 496 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 RBMY1CP0DJD4 496 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 RPL35AP18077 110 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 RBMY1FQ15415 496 aaKnown RBP10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 TWIST1Q15672 202 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 SPANXN1Q5VSR9 72 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 TMEM256Q8N2U0 113 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 OR10AG1Q8NH19 301 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 LINC00467Q9BRT7 94 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 C1QTNF4Q9BXJ3 329 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 XCL2Q9UBD3 114 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 PHLDA3Q9Y5J5 127 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 TIMM8BQ9Y5J9 83 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 NOTCH3Q9UM47 2321 aa10.13□□□□□ -0.79
PDLIM5-203ENST00000359265 IGHV4-4A0A075B6R2 117 aa10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 IGHV3-16A0A0C4DH30 117 aa10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 CBY3A6NI87 242 aa10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 PRB2P02812 416 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 RNASE3P12724 160 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 NTF3P20783 257 aa10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 SSTP61278 116 aa10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 EGFEM1PQ0D2K5 195 aa10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 SLAQ13239 276 aa10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 OXLD1Q5BKU9 147 aa10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 ZNF493Q6ZR52 646 aa10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 Q8N1Y9 231 aa10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 DEFB125Q8N687 156 aa10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 SCRT2Q9NQ03 307 aa10.12□□□□□ -0.79
PDLIM5-203ENST00000359265 SMIM15Q7Z3B0 74 aa10.11□□□□□ -0.79
PDLIM5-203ENST00000359265 C9orf85Q96MD7 179 aa10.11□□□□□ -0.79
PDLIM5-203ENST00000359265 LINC01587Q99440 93 aa10.11□□□□□ -0.79
PDLIM5-203ENST00000359265 TMEM208Q9BTX3 173 aa10.11□□□□□ -0.79
PDLIM5-203ENST00000359265 MUC4Q99102 2169 aa10.1□□□□□ -0.79
PDLIM5-203ENST00000359265 NDUFA6P56556 154 aa10.1□□□□□ -0.79
PDLIM5-203ENST00000359265 ZNF415Q09FC8 603 aa10.1□□□□□ -0.79
PDLIM5-203ENST00000359265 KIAA1644Q3SXP7 199 aa10.1□□□□□ -0.79
PDLIM5-203ENST00000359265 TMEM191AQ9H0A3 160 aa10.1□□□□□ -0.79
PDLIM5-203ENST00000359265 TP53TG3Q9ULZ0 132 aa10.1□□□□□ -0.79
PDLIM5-203ENST00000359265 GOLT1BQ9Y3E0 138 aa10.1□□□□□ -0.79
PDLIM5-203ENST00000359265 RYR2Q92736 4967 aa10.09□□□□□ -0.79
PDLIM5-203ENST00000359265 LOC102724200A0A096LPH7 203 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-203ENST00000359265 M0R381 172 aa10.09□□□□□ -0.79
PDLIM5-203ENST00000359265 NXPH4O95158 308 aa10.09□□□□□ -0.79
PDLIM5-203ENST00000359265 SAMD5Q5TGI4 173 aa10.09□□□□□ -0.79
PDLIM5-203ENST00000359265 SYT8Q8NBV8 401 aa10.09□□□□□ -0.79
PDLIM5-203ENST00000359265 MSRB1Q9NZV6 116 aa10.09□□□□□ -0.79
PDLIM5-203ENST00000359265 HTN1P15515 57 aa10.08□□□□□ -0.8
PDLIM5-203ENST00000359265 SRIP30626 198 aa10.08□□□□□ -0.8
PDLIM5-203ENST00000359265 FAM104BQ5XKR9 115 aa10.08□□□□□ -0.8
PDLIM5-203ENST00000359265 C1orf158Q8N1D5 194 aa10.08□□□□□ -0.8
PDLIM5-203ENST00000359265 AP1S3Q96PC3 154 aa10.08□□□□□ -0.8
PDLIM5-203ENST00000359265 MDFICQ9P1T7 246 aa10.08□□□□□ -0.8
PDLIM5-203ENST00000359265 IGHV3OR16-12A0A075B7B8 117 aa10.07□□□□□ -0.8
PDLIM5-203ENST00000359265 G3V4G9 280 aa10.07□□□□□ -0.8
PDLIM5-203ENST00000359265 GIG44P09565 113 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-203ENST00000359265 AMN1Q8IY45 258 aa10.07□□□□□ -0.8
PDLIM5-203ENST00000359265 CSTL1Q9H114 145 aa10.07□□□□□ -0.8
PDLIM5-203ENST00000359265 DYNC2H1Q8NCM8 4307 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-203ENST00000359265 SNRPEP62304 92 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-203ENST00000359265 OR10J3Q5JRS4 329 aa10.06□□□□□ -0.8
PDLIM5-203ENST00000359265 COA6Q5JTJ3 125 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-203ENST00000359265 ALKBH7Q9BT30 221 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-203ENST00000359265 TENM3Q9P273 2699 aa10.06□□□□□ -0.8
PDLIM5-203ENST00000359265 KIR2DL5BA0A0G2JN68 375 aa10.05□□□□□ -0.8
PDLIM5-203ENST00000359265 KIR2DL5BA0A0G2JPC4 375 aa10.05□□□□□ -0.8
PDLIM5-203ENST00000359265 C5orf52A6NGY3 159 aa10.05□□□□□ -0.8
PDLIM5-203ENST00000359265 SPRY2O43597 315 aa10.05□□□□□ -0.8
PDLIM5-203ENST00000359265 EVI2AP22794 236 aa10.05□□□□□ -0.8
PDLIM5-203ENST00000359265 APOC4P55056 127 aa10.05□□□□□ -0.8
PDLIM5-203ENST00000359265 KRTAP10-11P60412 298 aa10.05□□□□□ -0.8
PDLIM5-203ENST00000359265 Q0VG73 95 aa10.05□□□□□ -0.8
PDLIM5-203ENST00000359265 MRPL51Q4U2R6 128 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-203ENST00000359265 KIR2DL5AQ8N109 375 aa10.05□□□□□ -0.8
PDLIM5-203ENST00000359265 KIR2DL5BQ8NHK3 375 aa10.05□□□□□ -0.8
PDLIM5-203ENST00000359265 DPH3P1Q9H4G8 78 aa10.05□□□□□ -0.8
PDLIM5-203ENST00000359265 SACSQ9NZJ4 4579 aa10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 SMIM17P0DL12 118 aa10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 RAB4AP20338 218 aa10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 BAGE3Q86Y29 109 aa10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 ORMDL3Q8N138 153 aa10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 C11orf72Q8NBR9 251 aa10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 CSNK1G2-AS1Q8NCQ2 148 aa10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 C18orf32Q8TCD1 76 aa10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 TMEM263Q8WUH6 116 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 RNF185Q96GF1 192 aa10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 RCHY1Q96PM5 261 aa10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 SPXQ9BT56 116 aa10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 DNAH9Q9NYC9 4486 aa10.04□□□□□ -0.8
PDLIM5-203ENST00000359265 LOC105371267A0A1B0GV96 52 aa10.03□□□□□ -0.8
PDLIM5-203ENST00000359265 M0R2P5 195 aa10.03□□□□□ -0.8
PDLIM5-203ENST00000359265 UBE2CO00762 179 aa10.03□□□□□ -0.8
PDLIM5-203ENST00000359265 PPBPP02775 128 aa10.03□□□□□ -0.8
PDLIM5-203ENST00000359265 COL7A1Q02388 2944 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms