RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 C1QTNF4Q9BXJ3 329 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 CRYGBP07316 175 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 IFITM1P13164 125 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 C3orf56Q8N813 242 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 DPH3P1Q9H4G8 78 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 DSPP15924 2871 aaKnown RBP9.53□□□□□ -0.88
COL20A1-201ENST00000358894 MRPL35Q9NZE8 188 aaKnown RBP9.52□□□□□ -0.89
COL20A1-201ENST00000358894 MSMBP08118 114 aa9.52□□□□□ -0.89
COL20A1-201ENST00000358894 LGALS9BQ3B8N2 356 aa9.52□□□□□ -0.89
COL20A1-201ENST00000358894 MEIG1Q5JSS6 88 aa9.52□□□□□ -0.89
COL20A1-201ENST00000358894 LGALS9CQ6DKI2 356 aa9.52□□□□□ -0.89
COL20A1-201ENST00000358894 USMG5Q96IX5 58 aa9.52□□□□□ -0.89
COL20A1-201ENST00000358894 DAZ1Q9NQZ3 744 aaKnown RBP9.52□□□□□ -0.89
COL20A1-201ENST00000358894 SMPXQ9UHP9 88 aa9.52□□□□□ -0.89
COL20A1-201ENST00000358894 ERG28Q9UKR5 140 aa9.52□□□□□ -0.89
COL20A1-201ENST00000358894 BUB3O43684 328 aa9.52□□□□□ -0.89
COL20A1-201ENST00000358894 SPAG8Q99932 426 aaPredicted RBP9.52□□□□□ -0.89
COL20A1-201ENST00000358894 FBXL19-AS1Q494R0 122 aa9.51□□□□□ -0.89
COL20A1-201ENST00000358894 ITLN2Q8WWU7 325 aaPredicted RBP9.51□□□□□ -0.89
COL20A1-201ENST00000358894 DUX3Q96PT4 197 aa9.51□□□□□ -0.89
COL20A1-201ENST00000358894 C20orf78Q9BR46 151 aa9.51□□□□□ -0.89
COL20A1-201ENST00000358894 IGHV4-61A0A0C4DH41 118 aa9.51□□□□□ -0.89
COL20A1-201ENST00000358894 LINC01548A6NM66 108 aa9.51□□□□□ -0.89
COL20A1-201ENST00000358894 MYCNOSP40205 109 aa9.51□□□□□ -0.89
COL20A1-201ENST00000358894 DEFB1P60022 68 aa9.51□□□□□ -0.89
COL20A1-201ENST00000358894 FOXI2Q6ZQN5 318 aa9.51□□□□□ -0.89
COL20A1-201ENST00000358894 COL6A3P12111 3177 aa9.51□□□□□ -0.89
COL20A1-201ENST00000358894 SIVA1O15304 175 aa9.5□□□□□ -0.89
COL20A1-201ENST00000358894 CDSNQ15517 529 aa9.5□□□□□ -0.89
COL20A1-201ENST00000358894 C12orf74Q32Q52 190 aa9.5□□□□□ -0.89
COL20A1-201ENST00000358894 A0A1W2PRX2 142 aa9.5□□□□□ -0.89
COL20A1-201ENST00000358894 VWC2LB2RUY7 222 aa9.5□□□□□ -0.89
COL20A1-201ENST00000358894 SYNJ2BPP57105 145 aa9.5□□□□□ -0.89
COL20A1-201ENST00000358894 LOXL1Q08397 574 aaPredicted RBP9.5□□□□□ -0.89
COL20A1-201ENST00000358894 NEGR1Q7Z3B1 354 aa9.5□□□□□ -0.89
COL20A1-201ENST00000358894 LY6G5BQ8NDX9 201 aa9.5□□□□□ -0.89
COL20A1-201ENST00000358894 IGHV3-73A0A0B4J1V6 119 aa9.5□□□□□ -0.89
COL20A1-201ENST00000358894 C9orf153Q5TBE3 101 aa9.5□□□□□ -0.89
COL20A1-201ENST00000358894 CEND1Q8N111 149 aa9.5□□□□□ -0.89
COL20A1-201ENST00000358894 BLCAPP62952 87 aa9.49□□□□□ -0.89
COL20A1-201ENST00000358894 IGLL5B9A064 214 aa9.49□□□□□ -0.89
COL20A1-201ENST00000358894 LINC01545Q5VT33 79 aa9.49□□□□□ -0.89
COL20A1-201ENST00000358894 ZNF80P51504 273 aaPredicted RBP9.49□□□□□ -0.89
COL20A1-201ENST00000358894 TNFRSF18Q9Y5U5 241 aa9.49□□□□□ -0.89
COL20A1-201ENST00000358894 LRRK2Q5S007 2527 aa9.49□□□□□ -0.89
COL20A1-201ENST00000358894 NBEAQ8NFP9 2946 aa9.49□□□□□ -0.89
COL20A1-201ENST00000358894 TRBV25-1A0A075B6N4 114 aa9.49□□□□□ -0.89
COL20A1-201ENST00000358894 IGHV4-38-2P0DP08 117 aa9.49□□□□□ -0.89
COL20A1-201ENST00000358894 SLC25A16P16260 332 aa9.49□□□□□ -0.89
COL20A1-201ENST00000358894 Q8N8P6 123 aa9.49□□□□□ -0.89
COL20A1-201ENST00000358894 POLQO75417 2590 aa9.48□□□□□ -0.89
COL20A1-201ENST00000358894 SUMO2P61956 95 aaKnown RBP9.48□□□□□ -0.89
COL20A1-201ENST00000358894 IGKV3OR2-268A0A0C4DH90 116 aa9.48□□□□□ -0.89
COL20A1-201ENST00000358894 HLA-DRB4P13762 266 aa9.48□□□□□ -0.89
COL20A1-201ENST00000358894 PIP4P2Q8N4L2 257 aa9.48□□□□□ -0.89
COL20A1-201ENST00000358894 OR13C6PQ8NH95 151 aa9.48□□□□□ -0.89
COL20A1-201ENST00000358894 HLA-DRB4X5D2U9 266 aa9.48□□□□□ -0.89
COL20A1-201ENST00000358894 LY6LH3BQJ8 138 aa9.48□□□□□ -0.89
COL20A1-201ENST00000358894 TCTEX1D4Q5JR98 221 aa9.48□□□□□ -0.89
COL20A1-201ENST00000358894 PAPPA-AS1Q5QFB9 102 aa9.48□□□□□ -0.89
COL20A1-201ENST00000358894 C2orf82Q6UX34 121 aa9.48□□□□□ -0.89
COL20A1-201ENST00000358894 YAE1D1Q9NRH1 226 aa9.48□□□□□ -0.89
COL20A1-201ENST00000358894 TRAV12-2A0A075B6T6 113 aa9.47□□□□□ -0.89
COL20A1-201ENST00000358894 PTH2Q96A98 100 aa9.47□□□□□ -0.89
COL20A1-201ENST00000358894 LINC01587Q99440 93 aa9.47□□□□□ -0.89
COL20A1-201ENST00000358894 SIRPDQ9H106 197 aa9.47□□□□□ -0.89
COL20A1-201ENST00000358894 SPANXA1Q9NS26 97 aa9.47□□□□□ -0.89
COL20A1-201ENST00000358894 NDUFA4O00483 81 aa9.47□□□□□ -0.89
COL20A1-201ENST00000358894 CRIP1P50238 77 aa9.47□□□□□ -0.89
COL20A1-201ENST00000358894 ODF3BA8MYP8 253 aa9.47□□□□□ -0.89
COL20A1-201ENST00000358894 H7C1H1 209 aa9.47□□□□□ -0.89
COL20A1-201ENST00000358894 TNFRSF13BO14836 293 aaPredicted RBP9.47□□□□□ -0.89
COL20A1-201ENST00000358894 SPINK13Q1W4C9 94 aa9.47□□□□□ -0.89
COL20A1-201ENST00000358894 C2orf66Q6UXQ4 117 aa9.47□□□□□ -0.89
COL20A1-201ENST00000358894 Q71RC1 249 aaPredicted RBP9.47□□□□□ -0.89
COL20A1-201ENST00000358894 EDA2RQ9HAV5 297 aa9.47□□□□□ -0.89
COL20A1-201ENST00000358894 RAI1Q7Z5J4 1906 aaPredicted RBP9.47□□□□□ -0.89
COL20A1-201ENST00000358894 GNRH2O43555 120 aa9.46□□□□□ -0.89
COL20A1-201ENST00000358894 PLNP26678 52 aa9.46□□□□□ -0.89
COL20A1-201ENST00000358894 RRN3P1Q2M238 152 aa9.46□□□□□ -0.89
COL20A1-201ENST00000358894 FRYQ5TBA9 3013 aa9.46□□□□□ -0.89
COL20A1-201ENST00000358894 DNAL4O96015 105 aa9.46□□□□□ -0.9
COL20A1-201ENST00000358894 FOXI1Q12951 378 aa9.46□□□□□ -0.9
COL20A1-201ENST00000358894 NRGNQ92686 78 aa9.46□□□□□ -0.9
COL20A1-201ENST00000358894 IGLV2-11P01706 119 aa9.45□□□□□ -0.9
COL20A1-201ENST00000358894 LINC01559Q495D7 138 aa9.45□□□□□ -0.9
COL20A1-201ENST00000358894 C5orf56Q8N8D9 126 aa9.45□□□□□ -0.9
COL20A1-201ENST00000358894 KLK9Q9UKQ9 250 aa9.45□□□□□ -0.9
COL20A1-201ENST00000358894 RNF223E7ERA6 249 aa9.45□□□□□ -0.9
COL20A1-201ENST00000358894 MT-ATP8P03928 68 aa9.45□□□□□ -0.9
COL20A1-201ENST00000358894 SMIM2Q9BVW6 85 aa9.45□□□□□ -0.9
COL20A1-201ENST00000358894 IGHV4-30-2A0A087WSY4 118 aa9.45□□□□□ -0.9
COL20A1-201ENST00000358894 TRBV7-9A0A0J9YWB2 115 aa9.45□□□□□ -0.9
COL20A1-201ENST00000358894 DUSP14O95147 198 aaKnown RBP9.45□□□□□ -0.9
COL20A1-201ENST00000358894 ZNF876PQ49A33 203 aa9.45□□□□□ -0.9
COL20A1-201ENST00000358894 TRAV8-3A0A0A6YYJ7 113 aa9.45□□□□□ -0.9
COL20A1-201ENST00000358894 TRBV12-3P01733 135 aa9.44□□□□□ -0.9
COL20A1-201ENST00000358894 CIRBPQ14011 172 aaKnown RBP9.44□□□□□ -0.9
COL20A1-201ENST00000358894 PRADC1Q9BSG0 188 aa9.44□□□□□ -0.9
COL20A1-201ENST00000358894 Q8N976 141 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms