RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 MLST8Q9BVC4 326 aa8.77□□□□□ -1.01
COL11A1-202ENST00000358392 DEFB4AO15263 64 aa8.77□□□□□ -1.01
COL11A1-202ENST00000358392 TNRC6AQ8NDV7 1962 aaKnown RBP8.76□□□□□ -1.01
COL11A1-202ENST00000358392 A0A0U1RQV1 116 aa8.76□□□□□ -1.01
COL11A1-202ENST00000358392 F8W735 103 aaPredicted RBP8.76□□□□□ -1.01
COL11A1-202ENST00000358392 K7EM74 188 aa8.76□□□□□ -1.01
COL11A1-202ENST00000358392 IGHV4-59P01825 116 aa8.76□□□□□ -1.01
COL11A1-202ENST00000358392 ZNF491Q8N8L2 437 aa8.76□□□□□ -1.01
COL11A1-202ENST00000358392 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
COL11A1-202ENST00000358392 C10orf91Q5T1B1 145 aa8.76□□□□□ -1.01
COL11A1-202ENST00000358392 AGPAT4-IT1Q9H0P7 198 aa8.76□□□□□ -1.01
COL11A1-202ENST00000358392 COL4A6Q14031 1691 aa8.76□□□□□ -1.01
COL11A1-202ENST00000358392 C15orf65H3BRN8 121 aa8.76□□□□□ -1.01
COL11A1-202ENST00000358392 TTTY13Q9BZ97 58 aa8.76□□□□□ -1.01
COL11A1-202ENST00000358392 LGALS9O00182 355 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 Q6ZS92 163 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 IGKV2D-26A0A0A0MRZ7 120 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 A0A0J9YXV3 536 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 NUPR1O60356 82 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 HIGD2BQ4VC39 106 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 FOXL2NBQ6ZUU3 175 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 MSRB1Q9NZV6 116 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 MRPL36Q9P0J6 103 aaKnown RBP8.75□□□□□ -1.01
COL11A1-202ENST00000358392 LECT2O14960 151 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 LMO1P25800 156 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 ANKRD39Q53RE8 183 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 LYPD6Q86Y78 171 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 TRAV23DV6A0A075B6W5 121 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 FXYD2P54710 66 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 SRSF2Q01130 221 aaKnown RBP8.75□□□□□ -1.01
COL11A1-202ENST00000358392 DEFB125Q8N687 156 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 TM2D2Q9BX73 214 aa8.75□□□□□ -1.01
COL11A1-202ENST00000358392 FHL1Q13642 323 aa8.74□□□□□ -1.01
COL11A1-202ENST00000358392 DEFB112Q30KQ8 113 aa8.74□□□□□ -1.01
COL11A1-202ENST00000358392 PIFOQ8TCI5 191 aa8.74□□□□□ -1.01
COL11A1-202ENST00000358392 RITA1Q96K30 269 aa8.74□□□□□ -1.01
COL11A1-202ENST00000358392 FAM110AQ9BQ89 295 aa8.74□□□□□ -1.01
COL11A1-202ENST00000358392 ATP6V0E2Q8NHE4 81 aa8.74□□□□□ -1.01
COL11A1-202ENST00000358392 Q8TCH9 128 aa8.74□□□□□ -1.01
COL11A1-202ENST00000358392 WNK2Q9Y3S1 2297 aa8.73□□□□□ -1.01
COL11A1-202ENST00000358392 SPANXCQ9NY87 97 aa8.73□□□□□ -1.01
COL11A1-202ENST00000358392 WI2-2373I1.2A0A1W2PRP0 233 aa8.73□□□□□ -1.01
COL11A1-202ENST00000358392 SIPA1L1O43166 1804 aa8.73□□□□□ -1.01
COL11A1-202ENST00000358392 RNASE8Q8TDE3 154 aaKnown RBP8.73□□□□□ -1.01
COL11A1-202ENST00000358392 ELANEP08246 267 aa8.72□□□□□ -1.01
COL11A1-202ENST00000358392 PRR20EP86478 221 aa8.72□□□□□ -1.01
COL11A1-202ENST00000358392 PRR20CP86479 221 aa8.72□□□□□ -1.01
COL11A1-202ENST00000358392 PRR20DP86480 221 aa8.72□□□□□ -1.01
COL11A1-202ENST00000358392 PRR20BP86481 221 aa8.72□□□□□ -1.01
COL11A1-202ENST00000358392 PRR20AP86496 221 aa8.72□□□□□ -1.01
COL11A1-202ENST00000358392 LINC01620Q4KN68 170 aa8.72□□□□□ -1.01
COL11A1-202ENST00000358392 SPRNQ5BIV9 151 aa8.72□□□□□ -1.01
COL11A1-202ENST00000358392 PTH2Q96A98 100 aa8.72□□□□□ -1.01
COL11A1-202ENST00000358392 THSD7AQ9UPZ6 1657 aa8.72□□□□□ -1.01
COL11A1-202ENST00000358392 C16orf74Q96GX8 76 aa8.72□□□□□ -1.01
COL11A1-202ENST00000358392 FANCD2OSQ96PS1 177 aa8.72□□□□□ -1.01
COL11A1-202ENST00000358392 TRBV12-3P01733 135 aa8.71□□□□□ -1.01
COL11A1-202ENST00000358392 CCL18P55774 89 aa8.71□□□□□ -1.01
COL11A1-202ENST00000358392 ADAMTS7Q9UKP4 1686 aa8.71□□□□□ -1.02
COL11A1-202ENST00000358392 FOXI1Q12951 378 aa8.71□□□□□ -1.02
COL11A1-202ENST00000358392 ABCA4P78363 2273 aa8.71□□□□□ -1.02
COL11A1-202ENST00000358392 A0A0J9YWU9 116 aa8.71□□□□□ -1.02
COL11A1-202ENST00000358392 H0YGX0 51 aa8.71□□□□□ -1.02
COL11A1-202ENST00000358392 COL6A6A6NMZ7 2263 aa8.7□□□□□ -1.02
COL11A1-202ENST00000358392 DAZ2Q13117 558 aaKnown RBP8.7□□□□□ -1.02
COL11A1-202ENST00000358392 DAZ4Q86SG3 579 aaKnown RBP8.7□□□□□ -1.02
COL11A1-202ENST00000358392 DAZ3Q9NR90 486 aaKnown RBP8.7□□□□□ -1.02
COL11A1-202ENST00000358392 GP9P14770 177 aa8.7□□□□□ -1.02
COL11A1-202ENST00000358392 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
COL11A1-202ENST00000358392 SPTA1P02549 2419 aa8.7□□□□□ -1.02
COL11A1-202ENST00000358392 DEFB1P60022 68 aa8.7□□□□□ -1.02
COL11A1-202ENST00000358392 TEN1Q86WV5 123 aa8.7□□□□□ -1.02
COL11A1-202ENST00000358392 CASC2Q6XLA1 102 aa8.7□□□□□ -1.02
COL11A1-202ENST00000358392 HHLA3Q9XRX5 114 aa8.7□□□□□ -1.02
COL11A1-202ENST00000358392 VWA8A3KMH1 1905 aa8.7□□□□□ -1.02
COL11A1-202ENST00000358392 UPK3BQ9BT76 320 aa8.7□□□□□ -1.02
COL11A1-202ENST00000358392 A0A096LNI7 61 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 LRCOL1A6NCL2 159 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 TEX22C9J3V5 150 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 IGHV4-38-2P0DP08 117 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 C17orf82Q86X59 251 aaPredicted RBP8.69□□□□□ -1.02
COL11A1-202ENST00000358392 LINC00311Q8N616 119 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 DIRC1Q969H9 104 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 TRAV26-1A0A087WT03 109 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 ATP5G1P05496 136 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 ZNF524Q96C55 264 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 KIR2DL5BA0A0G2JN68 375 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 KIR2DL5BA0A0G2JPC4 375 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 J3QLI3 93 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 KIR2DL5AQ8N109 375 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 VPREB3Q9UKI3 123 aa8.69□□□□□ -1.02
COL11A1-202ENST00000358392 K7ENP7 123 aa8.68□□□□□ -1.02
COL11A1-202ENST00000358392 NDUFA1O15239 70 aa8.68□□□□□ -1.02
COL11A1-202ENST00000358392 Q8N1Y9 231 aa8.68□□□□□ -1.02
COL11A1-202ENST00000358392 MIR7-3HGQ8N6C7 128 aa8.68□□□□□ -1.02
COL11A1-202ENST00000358392 ZGRF1Q86YA3 2104 aa8.68□□□□□ -1.02
COL11A1-202ENST00000358392 POU2AF1Q16633 256 aa8.68□□□□□ -1.02
COL11A1-202ENST00000358392 PRSS33Q8NF86 280 aa8.68□□□□□ -1.02
COL11A1-202ENST00000358392 SPART-AS1P0CW21 52 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms