RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 COLCA2A8K830 154 aa10.62□□□□□ -0.71
CCNE1-202ENST00000357943 PPP1R2P9O14990 202 aa10.62□□□□□ -0.71
CCNE1-202ENST00000357943 GZMBP10144 247 aa10.62□□□□□ -0.71
CCNE1-202ENST00000357943 S100A4P26447 101 aaKnown RBP10.62□□□□□ -0.71
CCNE1-202ENST00000357943 FAM231DQ6ZW35 169 aa10.62□□□□□ -0.71
CCNE1-202ENST00000357943 YPEL4Q96NS1 127 aa10.62□□□□□ -0.71
CCNE1-202ENST00000357943 S100A6P06703 90 aa10.61□□□□□ -0.71
CCNE1-202ENST00000357943 ASIPP42127 132 aa10.61□□□□□ -0.71
CCNE1-202ENST00000357943 DAZ2Q13117 558 aaKnown RBP10.61□□□□□ -0.71
CCNE1-202ENST00000357943 OR10G8Q8NGN5 311 aa10.61□□□□□ -0.71
CCNE1-202ENST00000357943 RPP21Q9H633 154 aaKnown RBP10.61□□□□□ -0.71
CCNE1-202ENST00000357943 STARD9Q9P2P6 4700 aa10.61□□□□□ -0.71
CCNE1-202ENST00000357943 H3BVH4 76 aa10.6□□□□□ -0.71
CCNE1-202ENST00000357943 ARMS2P0C7Q2 107 aa10.6□□□□□ -0.71
CCNE1-202ENST00000357943 SPART-AS1P0CW21 52 aa10.6□□□□□ -0.71
CCNE1-202ENST00000357943 C9orf85Q96MD7 179 aa10.6□□□□□ -0.71
CCNE1-202ENST00000357943 OSTCQ9NRP0 149 aa10.6□□□□□ -0.71
CCNE1-202ENST00000357943 LYRM9A8MSI8 78 aa10.59□□□□□ -0.71
CCNE1-202ENST00000357943 GATCO43716 136 aaKnown RBP10.59□□□□□ -0.71
CCNE1-202ENST00000357943 SPINK4O60575 86 aa10.59□□□□□ -0.71
CCNE1-202ENST00000357943 DNLZQ5SXM8 178 aa10.59□□□□□ -0.71
CCNE1-202ENST00000357943 Q6ZTI0 123 aa10.59□□□□□ -0.71
CCNE1-202ENST00000357943 C11orf45Q8TAV5 145 aa10.59□□□□□ -0.71
CCNE1-202ENST00000357943 IL36BQ9NZH7 164 aa10.59□□□□□ -0.71
CCNE1-202ENST00000357943 CSMD3Q7Z407 3707 aa10.59□□□□□ -0.71
CCNE1-202ENST00000357943 TRGV1A0A0A0MS02 117 aa10.58□□□□□ -0.72
CCNE1-202ENST00000357943 CXCL1P09341 107 aa10.58□□□□□ -0.72
CCNE1-202ENST00000357943 DEFB130BP0DP73 79 aa10.58□□□□□ -0.72
CCNE1-202ENST00000357943 DEFB130AP0DP74 79 aa10.58□□□□□ -0.72
CCNE1-202ENST00000357943 NANOS2P60321 138 aaKnown RBP10.58□□□□□ -0.72
CCNE1-202ENST00000357943 ELOBQ15370 118 aa10.58□□□□□ -0.72
CCNE1-202ENST00000357943 SPXQ9BT56 116 aa10.58□□□□□ -0.72
CCNE1-202ENST00000357943 MRPL16Q9NX20 251 aaKnown RBP10.58□□□□□ -0.72
CCNE1-202ENST00000357943 V9GYV3 84 aa10.58□□□□□ -0.72
CCNE1-202ENST00000357943 PLECQ15149 4684 aaKnown RBP10.58□□□□□ -0.72
CCNE1-202ENST00000357943 C5orf52A6NGY3 159 aa10.58□□□□□ -0.72
CCNE1-202ENST00000357943 RPS20P60866 119 aaKnown RBP10.58□□□□□ -0.72
CCNE1-202ENST00000357943 C12orf74Q32Q52 190 aa10.58□□□□□ -0.72
CCNE1-202ENST00000357943 URGCP-MRPS24S4R325 110 aa10.58□□□□□ -0.72
CCNE1-202ENST00000357943 DYNC2H1Q8NCM8 4307 aaKnown RBP10.57□□□□□ -0.72
CCNE1-202ENST00000357943 GAGE12BA1L429 117 aa10.57□□□□□ -0.72
CCNE1-202ENST00000357943 XKRY2A2RUG3 117 aa10.57□□□□□ -0.72
CCNE1-202ENST00000357943 PCP4L1A6NKN8 68 aa10.57□□□□□ -0.72
CCNE1-202ENST00000357943 GAGE7O76087 117 aa10.57□□□□□ -0.72
CCNE1-202ENST00000357943 IGLC6P0CF74 106 aa10.57□□□□□ -0.72
CCNE1-202ENST00000357943 GAGE12FP0CL80 117 aa10.57□□□□□ -0.72
CCNE1-202ENST00000357943 GAGE12GP0CL81 117 aa10.57□□□□□ -0.72
CCNE1-202ENST00000357943 GAGE12IP0CL82 117 aa10.57□□□□□ -0.72
CCNE1-202ENST00000357943 IMMP2LQ96T52 175 aa10.57□□□□□ -0.72
CCNE1-202ENST00000357943 SCRT2Q9NQ03 307 aa10.57□□□□□ -0.72
CCNE1-202ENST00000357943 MUC21A0A0G2JKD1 596 aa10.56□□□□□ -0.72
CCNE1-202ENST00000357943 MUC21A0A140T8X8 626 aa10.56□□□□□ -0.72
CCNE1-202ENST00000357943 TEX48A0A1B0GUV7 120 aa10.56□□□□□ -0.72
CCNE1-202ENST00000357943 M0R2P5 195 aa10.56□□□□□ -0.72
CCNE1-202ENST00000357943 LGALS9BQ3B8N2 356 aa10.56□□□□□ -0.72
CCNE1-202ENST00000357943 ZNF876PQ49A33 203 aa10.56□□□□□ -0.72
CCNE1-202ENST00000357943 CT83Q5H943 113 aa10.56□□□□□ -0.72
CCNE1-202ENST00000357943 Q6ZTC4 211 aa10.56□□□□□ -0.72
CCNE1-202ENST00000357943 LINC00612Q8N6U2 182 aa10.56□□□□□ -0.72
CCNE1-202ENST00000357943 TPPP3Q9BW30 176 aa10.56□□□□□ -0.72
CCNE1-202ENST00000357943 SSBP4Q9BWG4 385 aaPredicted RBP10.56□□□□□ -0.72
CCNE1-202ENST00000357943 SNAI2O43623 268 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 MED14OSP0DP75 135 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 S100PP25815 95 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 DAD1P61803 113 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 DMRTA1Q5VZB9 504 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 FER1L6-AS1Q8NA97 138 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 GTSF1Q8WW33 167 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 RASL10AQ92737 203 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 PHLDA3Q9Y5J5 127 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 MUC4Q99102 2169 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 TGIF2-C20orf24A0A0A6YYL0 155 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 A8MWL6 223 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 OR5AL1P0C617 328 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 SSTP61278 116 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 OR10AG1Q8NH19 301 aa10.55□□□□□ -0.72
CCNE1-202ENST00000357943 TRBV24-1A0A075B6N3 115 aa10.54□□□□□ -0.72
CCNE1-202ENST00000357943 M0R381 172 aa10.54□□□□□ -0.72
CCNE1-202ENST00000357943 KCNIP4Q6PIL6 250 aa10.54□□□□□ -0.72
CCNE1-202ENST00000357943 LYZL1Q6UWQ5 148 aa10.54□□□□□ -0.72
CCNE1-202ENST00000357943 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
CCNE1-202ENST00000357943 TRGV2A0A075B6R0 118 aa10.53□□□□□ -0.72
CCNE1-202ENST00000357943 A0A1W2PPQ1 181 aa10.53□□□□□ -0.72
CCNE1-202ENST00000357943 RAB5AP20339 215 aa10.53□□□□□ -0.72
CCNE1-202ENST00000357943 FAM3BP58499 235 aaPredicted RBP10.53□□□□□ -0.72
CCNE1-202ENST00000357943 WWC2-AS2Q96NR7 200 aa10.53□□□□□ -0.72
CCNE1-202ENST00000357943 SNRPEP62304 92 aaKnown RBP10.52□□□□□ -0.73
CCNE1-202ENST00000357943 POM121L12Q8N7R1 296 aa10.52□□□□□ -0.73
CCNE1-202ENST00000357943 PTH2Q96A98 100 aa10.52□□□□□ -0.73
CCNE1-202ENST00000357943 FAM210BQ96KR6 192 aa10.52□□□□□ -0.73
CCNE1-202ENST00000357943 HIGD1CA8MV81 97 aa10.51□□□□□ -0.73
CCNE1-202ENST00000357943 IGHV3-53P01767 116 aa10.51□□□□□ -0.73
CCNE1-202ENST00000357943 CTRLP40313 264 aa10.51□□□□□ -0.73
CCNE1-202ENST00000357943 FOXA3P55318 350 aaPredicted RBP10.51□□□□□ -0.73
CCNE1-202ENST00000357943 SPANXN1Q5VSR9 72 aa10.51□□□□□ -0.73
CCNE1-202ENST00000357943 ZFP82Q8N141 532 aa10.51□□□□□ -0.73
CCNE1-202ENST00000357943 PGLYRP4Q96LB8 373 aa10.51□□□□□ -0.73
CCNE1-202ENST00000357943 C18orf15Q96N68 181 aa10.51□□□□□ -0.73
CCNE1-202ENST00000357943 GFRA4Q9GZZ7 299 aa10.51□□□□□ -0.73
CCNE1-202ENST00000357943 JPT2Q9H910 190 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms