RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 PRSS29PA6NIE9 313 aa13.38□□□□□ -0.27
RTN4-204ENST00000357732 H3BMG7 143 aa13.38□□□□□ -0.27
RTN4-204ENST00000357732 SCGB2A2Q13296 93 aa13.38□□□□□ -0.27
RTN4-204ENST00000357732 WFDC2Q14508 124 aa13.38□□□□□ -0.27
RTN4-204ENST00000357732 RPL39LQ96EH5 51 aaKnown RBP13.38□□□□□ -0.27
RTN4-204ENST00000357732 CYSLTR1Q9Y271 337 aa13.38□□□□□ -0.27
RTN4-204ENST00000357732 SPATA25Q9BR10 227 aa13.37□□□□□ -0.27
RTN4-204ENST00000357732 KLK15Q9H2R5 256 aa13.37□□□□□ -0.27
RTN4-204ENST00000357732 PRO0461Q9UI25 63 aa13.37□□□□□ -0.27
RTN4-204ENST00000357732 RNASE3P12724 160 aaKnown RBP13.37□□□□□ -0.27
RTN4-204ENST00000357732 COX6B1P14854 86 aa13.37□□□□□ -0.27
RTN4-204ENST00000357732 HERVK_113P61574 105 aa13.37□□□□□ -0.27
RTN4-204ENST00000357732 UNQ9165/PRO28630Q6UXU0 137 aa13.37□□□□□ -0.27
RTN4-204ENST00000357732 MGPP08493 103 aa13.36□□□□□ -0.27
RTN4-204ENST00000357732 ZFHX3Q15911 3703 aa13.36□□□□□ -0.27
RTN4-204ENST00000357732 ZNF815PA8K554 130 aa13.36□□□□□ -0.27
RTN4-204ENST00000357732 LYRM7Q5U5X0 104 aa13.36□□□□□ -0.27
RTN4-204ENST00000357732 ATP6V0E2Q8NHE4 81 aa13.36□□□□□ -0.27
RTN4-204ENST00000357732 TMEM141Q96I45 108 aa13.36□□□□□ -0.27
RTN4-204ENST00000357732 GAGE12HA6NDE8 117 aa13.35□□□□□ -0.27
RTN4-204ENST00000357732 IGHV1-69P01742 117 aa13.35□□□□□ -0.27
RTN4-204ENST00000357732 UBE2D1P51668 147 aa13.35□□□□□ -0.27
RTN4-204ENST00000357732 MORN3Q6PF18 240 aaPredicted RBP13.35□□□□□ -0.27
RTN4-204ENST00000357732 TMEM219Q86XT9 240 aa13.35□□□□□ -0.27
RTN4-204ENST00000357732 KIF25-AS1Q9Y6Z4 181 aa13.35□□□□□ -0.27
RTN4-204ENST00000357732 COL6A6A6NMZ7 2263 aa13.35□□□□□ -0.27
RTN4-204ENST00000357732 RNASE4P34096 147 aaKnown RBP13.35□□□□□ -0.27
RTN4-204ENST00000357732 TIMM17AQ99595 171 aa13.34□□□□□ -0.27
RTN4-204ENST00000357732 KLLNB2CW77 178 aa13.34□□□□□ -0.27
RTN4-204ENST00000357732 J3KRW8 73 aa13.34□□□□□ -0.27
RTN4-204ENST00000357732 IGHG2P01859 326 aa13.34□□□□□ -0.27
RTN4-204ENST00000357732 SCGB1D4Q6XE38 83 aa13.34□□□□□ -0.27
RTN4-204ENST00000357732 LINC00527Q9UJ94 153 aa13.34□□□□□ -0.27
RTN4-204ENST00000357732 AGRNO00468 2067 aa13.33□□□□□ -0.28
RTN4-204ENST00000357732 IGHV3OR16-10A0A075B7F0 116 aa13.33□□□□□ -0.28
RTN4-204ENST00000357732 LY6DQ14210 128 aa13.33□□□□□ -0.28
RTN4-204ENST00000357732 DLX4Q92988 240 aaPredicted RBP13.33□□□□□ -0.28
RTN4-204ENST00000357732 VCYO14598 125 aa13.32□□□□□ -0.28
RTN4-204ENST00000357732 POLR2KP53803 58 aaKnown RBP13.32□□□□□ -0.28
RTN4-204ENST00000357732 LINC00315P59091 139 aa13.32□□□□□ -0.28
RTN4-204ENST00000357732 PMVKQ15126 192 aa13.32□□□□□ -0.28
RTN4-204ENST00000357732 ETDBQ3ZM63 59 aa13.32□□□□□ -0.28
RTN4-204ENST00000357732 PGPEP1Q9NXJ5 209 aa13.32□□□□□ -0.28
RTN4-204ENST00000357732 TSSC4Q9Y5U2 329 aaPredicted RBP13.32□□□□□ -0.28
RTN4-204ENST00000357732 IGIPA6NJ69 53 aa13.32□□□□□ -0.28
RTN4-204ENST00000357732 AZU1P20160 251 aa13.32□□□□□ -0.28
RTN4-204ENST00000357732 KIR2DL4Q99706 377 aa13.32□□□□□ -0.28
RTN4-204ENST00000357732 MRPL16Q9NX20 251 aaKnown RBP13.32□□□□□ -0.28
RTN4-204ENST00000357732 CACNA1BQ00975 2339 aa13.32□□□□□ -0.28
RTN4-204ENST00000357732 TRBV12-3P01733 135 aa13.31□□□□□ -0.28
RTN4-204ENST00000357732 CRYGDP07320 174 aa13.31□□□□□ -0.28
RTN4-204ENST00000357732 SPAG8Q99932 426 aaPredicted RBP13.31□□□□□ -0.28
RTN4-204ENST00000357732 DAZ1Q9NQZ3 744 aaKnown RBP13.31□□□□□ -0.28
RTN4-204ENST00000357732 SPTBN1Q01082 2364 aaKnown RBP13.31□□□□□ -0.28
RTN4-204ENST00000357732 TRBV6-5A0A0K0K1A5 114 aa13.31□□□□□ -0.28
RTN4-204ENST00000357732 GNRH2O43555 120 aa13.31□□□□□ -0.28
RTN4-204ENST00000357732 SRSF9Q13242 221 aaKnown RBP eCLIP13.31□□□□□ -0.28
RTN4-204ENST00000357732 IGLV4-69A0A075B6H9 119 aa13.3□□□□□ -0.28
RTN4-204ENST00000357732 K7EMT4 169 aa13.3□□□□□ -0.28
RTN4-204ENST00000357732 ID1P41134 155 aa13.3□□□□□ -0.28
RTN4-204ENST00000357732 FAM159AQ6UWV7 190 aa13.3□□□□□ -0.28
RTN4-204ENST00000357732 AMTNQ6UX39 209 aa13.3□□□□□ -0.28
RTN4-204ENST00000357732 ZFP2Q6ZN57 461 aa13.3□□□□□ -0.28
RTN4-204ENST00000357732 ODF3Q96PU9 254 aa13.3□□□□□ -0.28
RTN4-204ENST00000357732 RHPN1-AS1Q9BWJ2 59 aa13.3□□□□□ -0.28
RTN4-204ENST00000357732 C11orf86A6NJI1 115 aa13.3□□□□□ -0.28
RTN4-204ENST00000357732 C19orf84I3L1E1 186 aa13.3□□□□□ -0.28
RTN4-204ENST00000357732 CIDEAO60543 219 aa13.3□□□□□ -0.28
RTN4-204ENST00000357732 DUSP14O95147 198 aaKnown RBP13.3□□□□□ -0.28
RTN4-204ENST00000357732 RPL11P62913 178 aaKnown RBP13.3□□□□□ -0.28
RTN4-204ENST00000357732 TP53TG1Q9Y2A0 90 aa13.3□□□□□ -0.28
RTN4-204ENST00000357732 NDUFS8O00217 210 aa13.29□□□□□ -0.28
RTN4-204ENST00000357732 CD7P09564 240 aa13.29□□□□□ -0.28
RTN4-204ENST00000357732 CFAP126Q5VTH2 177 aa13.29□□□□□ -0.28
RTN4-204ENST00000357732 SH2D6Q7Z4S9 175 aa13.29□□□□□ -0.28
RTN4-204ENST00000357732 TRBV27A0A0K0K1C4 114 aa13.28□□□□□ -0.28
RTN4-204ENST00000357732 LGALS9O00182 355 aa13.28□□□□□ -0.28
RTN4-204ENST00000357732 TSHBP01222 138 aa13.28□□□□□ -0.28
RTN4-204ENST00000357732 UBE2D3P61077 147 aa13.28□□□□□ -0.28
RTN4-204ENST00000357732 UBE2D2P62837 147 aa13.28□□□□□ -0.28
RTN4-204ENST00000357732 C1QTNF4Q9BXJ3 329 aa13.28□□□□□ -0.28
RTN4-204ENST00000357732 ZNF580Q9UK33 172 aa13.28□□□□□ -0.28
RTN4-204ENST00000357732 A0A0J9YY99 117 aa13.28□□□□□ -0.28
RTN4-204ENST00000357732 IGLV1-40P01703 118 aa13.28□□□□□ -0.28
RTN4-204ENST00000357732 GTSF1LQ9H1H1 148 aa13.28□□□□□ -0.28
RTN4-204ENST00000357732 VPS13CQ709C8 3753 aa13.27□□□□□ -0.28
RTN4-204ENST00000357732 A6NDX4 124 aa13.27□□□□□ -0.29
RTN4-204ENST00000357732 APOMO95445 188 aa13.27□□□□□ -0.29
RTN4-204ENST00000357732 SUMO4Q6EEV6 95 aa13.27□□□□□ -0.29
RTN4-204ENST00000357732 BRD3OSQ6XYD6 125 aa13.27□□□□□ -0.29
RTN4-204ENST00000357732 TRBV20-1A0A075B6N2 111 aa13.27□□□□□ -0.29
RTN4-204ENST00000357732 F6UB75 175 aa13.27□□□□□ -0.29
RTN4-204ENST00000357732 LCNL1Q6ZST4 164 aa13.27□□□□□ -0.29
RTN4-204ENST00000357732 PLEKHB2Q96CS7 222 aa13.27□□□□□ -0.29
RTN4-204ENST00000357732 HIVEP3Q5T1R4 2406 aa13.26□□□□□ -0.29
RTN4-204ENST00000357732 TSPAN13O95857 204 aa13.26□□□□□ -0.29
RTN4-204ENST00000357732 ZNF876PQ49A33 203 aa13.26□□□□□ -0.29
RTN4-204ENST00000357732 VCX2Q9H322 139 aa13.26□□□□□ -0.29
RTN4-204ENST00000357732 SPRY2O43597 315 aa13.25□□□□□ -0.29
RTN4-204ENST00000357732 IGHV4-39P01824 125 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms