RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 Q8N8P6 123 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 FABP5P3A8MUU1 101 aa9.66□□□□□ -0.86
RTFDC1-202ENST00000357348 DPM2O94777 84 aa9.66□□□□□ -0.86
RTFDC1-202ENST00000357348 WFDC3Q8IUB2 231 aa9.66□□□□□ -0.86
RTFDC1-202ENST00000357348 SELENOKQ9Y6D0 94 aa9.66□□□□□ -0.86
RTFDC1-202ENST00000357348 TRAV41A0A0B4J266 112 aa9.66□□□□□ -0.86
RTFDC1-202ENST00000357348 CIDEAO60543 219 aa9.66□□□□□ -0.86
RTFDC1-202ENST00000357348 IGHG2P01859 326 aa9.66□□□□□ -0.86
RTFDC1-202ENST00000357348 FOXI2Q6ZQN5 318 aa9.66□□□□□ -0.86
RTFDC1-202ENST00000357348 LCNL1Q6ZST4 164 aa9.66□□□□□ -0.86
RTFDC1-202ENST00000357348 Q8TAT8 98 aa9.66□□□□□ -0.86
RTFDC1-202ENST00000357348 C21orf62Q9NYP8 219 aa9.66□□□□□ -0.86
RTFDC1-202ENST00000357348 TEX48A0A1B0GUV7 120 aa9.65□□□□□ -0.86
RTFDC1-202ENST00000357348 RBAKDNA6NC62 111 aa9.64□□□□□ -0.87
RTFDC1-202ENST00000357348 TM4SF20Q53R12 229 aa9.64□□□□□ -0.87
RTFDC1-202ENST00000357348 C10orf99Q6UWK7 81 aa9.64□□□□□ -0.87
RTFDC1-202ENST00000357348 TMEM158Q8WZ71 300 aa9.64□□□□□ -0.87
RTFDC1-202ENST00000357348 TTTY13Q9BZ97 58 aa9.64□□□□□ -0.87
RTFDC1-202ENST00000357348 MAST4O15021 2626 aa9.64□□□□□ -0.87
RTFDC1-202ENST00000357348 IGLL5B9A064 214 aa9.64□□□□□ -0.87
RTFDC1-202ENST00000357348 F8W1H4 67 aa9.64□□□□□ -0.87
RTFDC1-202ENST00000357348 LINC01619G3V211 115 aa9.64□□□□□ -0.87
RTFDC1-202ENST00000357348 PRSS1P07477 247 aa9.64□□□□□ -0.87
RTFDC1-202ENST00000357348 ZC2HC1BQ5TFG8 222 aa9.64□□□□□ -0.87
RTFDC1-202ENST00000357348 CTSGP08311 255 aa9.63□□□□□ -0.87
RTFDC1-202ENST00000357348 GTSCR1Q86UQ5 136 aa9.63□□□□□ -0.87
RTFDC1-202ENST00000357348 K7ERJ3 54 aa9.63□□□□□ -0.87
RTFDC1-202ENST00000357348 ORM1P02763 201 aa9.63□□□□□ -0.87
RTFDC1-202ENST00000357348 HLA-DMBP28068 263 aa9.63□□□□□ -0.87
RTFDC1-202ENST00000357348 KLK9Q2XQG4 91 aa9.63□□□□□ -0.87
RTFDC1-202ENST00000357348 FAM110DQ8TAY7 271 aaPredicted RBP9.63□□□□□ -0.87
RTFDC1-202ENST00000357348 SPANXB1Q9NS25 103 aaPredicted RBP9.63□□□□□ -0.87
RTFDC1-202ENST00000357348 TMEM160Q9NX00 188 aa9.63□□□□□ -0.87
RTFDC1-202ENST00000357348 KLK9Q9UKQ9 250 aa9.63□□□□□ -0.87
RTFDC1-202ENST00000357348 IGF1P05019 195 aa9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 SAMD13Q5VXD3 122 aa9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 HIST2H2BDQ6DRA6 164 aa9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 NRACQ8N912 160 aa9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 ZNF702PQ9H963 129 aa9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 JMJD1CQ15652 2540 aa9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 A0A1B0GWB2 263 aa9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 SCGB2A1O75556 95 aa9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 GATA1P15976 413 aaPredicted RBP9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 RPL24P83731 157 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 C15orf32Q32M92 178 aa9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 MAPKAPK5-AS1Q8N8E1 139 aa9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 KLK15Q9H2R5 256 aa9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 NHP2Q9NX24 153 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-202ENST00000357348 IGHV4-4A0A075B6R2 117 aa9.61□□□□□ -0.87
RTFDC1-202ENST00000357348 A0A087WX48 190 aa9.61□□□□□ -0.87
RTFDC1-202ENST00000357348 IGKV3D-20A0A0C4DH25 116 aa9.61□□□□□ -0.87
RTFDC1-202ENST00000357348 PF4V1P10720 104 aa9.61□□□□□ -0.87
RTFDC1-202ENST00000357348 ZNF418Q8TF45 676 aaPredicted RBP9.61□□□□□ -0.87
RTFDC1-202ENST00000357348 MRPL35Q9NZE8 188 aaKnown RBP9.61□□□□□ -0.87
RTFDC1-202ENST00000357348 IGHV3-35A0A0C4DH35 117 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 TRGV3P03979 118 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 PPIFP30405 207 aaKnown RBP9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 C12orf74Q32Q52 190 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 CD300EQ496F6 205 aaPredicted RBP9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 IGFL4Q6B9Z1 124 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 SPATA25Q9BR10 227 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 TRBV7-3A0A075B6L6 115 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 IGHV3OR16-8A0A075B7F1 116 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 PRAC2D3DTV9 90 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 IGHV3-11P01762 117 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 RAB9AP51151 201 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 ERCC8Q13216 396 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 LAGE3Q14657 143 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 C19orf54Q5BKX5 351 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 SIGMAR1Q99720 223 aa9.6□□□□□ -0.87
RTFDC1-202ENST00000357348 TRAV12-1A0A0B4J245 112 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 IGHV7-4-1A0A0J9YVY3 117 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 ZNF207O43670 478 aaKnown RBP9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 SCGB2A2Q13296 93 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 MYOZ3Q8TDC0 251 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 ZNF479Q96JC4 524 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 PRO0461Q9UI25 63 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 AZU1P20160 251 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 PLNP26678 52 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 WFDC2Q14508 124 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 Q6ZSV7 163 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 ZNF502Q8TBZ5 544 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 MRPL53Q96EL3 112 aaKnown RBP9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 SLC50A1Q9BRV3 221 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 ZFAND3Q9H8U3 227 aa9.59□□□□□ -0.87
RTFDC1-202ENST00000357348 BUB3O43684 328 aa9.58□□□□□ -0.88
RTFDC1-202ENST00000357348 HILS1P60008 231 aa9.58□□□□□ -0.88
RTFDC1-202ENST00000357348 TMEM86BQ8N661 226 aa9.58□□□□□ -0.88
RTFDC1-202ENST00000357348 GAGE12HA6NDE8 117 aa9.58□□□□□ -0.88
RTFDC1-202ENST00000357348 J3QR89 54 aa9.58□□□□□ -0.88
RTFDC1-202ENST00000357348 CRIP2P52943 208 aaPredicted RBP9.58□□□□□ -0.88
RTFDC1-202ENST00000357348 RRN3P1Q2M238 152 aa9.58□□□□□ -0.88
RTFDC1-202ENST00000357348 CLEC19AQ6UXS0 136 aa9.58□□□□□ -0.88
RTFDC1-202ENST00000357348 CLEC3BP05452 202 aa9.57□□□□□ -0.88
RTFDC1-202ENST00000357348 AGPAT4-IT1Q9H0P7 198 aa9.57□□□□□ -0.88
RTFDC1-202ENST00000357348 TSSC4Q9Y5U2 329 aaPredicted RBP9.57□□□□□ -0.88
RTFDC1-202ENST00000357348 C2CD3Q4AC94 2353 aa9.56□□□□□ -0.88
RTFDC1-202ENST00000357348 CRLF1O75462 422 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms