RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 MYOZ3Q8TDC0 251 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 RNF185Q96GF1 192 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 SMAD5-AS1Q9Y6J3 95 aa6.36□□□□□ -1.39
CDC42SE1-201ENST00000357235 A4D1N5 150 aa6.35□□□□□ -1.39
CDC42SE1-201ENST00000357235 F8W735 103 aaPredicted RBP6.35□□□□□ -1.39
CDC42SE1-201ENST00000357235 CTSGP08311 255 aa6.35□□□□□ -1.39
CDC42SE1-201ENST00000357235 C15orf32Q32M92 178 aa6.35□□□□□ -1.39
CDC42SE1-201ENST00000357235 TMEM78Q5T7P6 136 aa6.35□□□□□ -1.39
CDC42SE1-201ENST00000357235 CFHR4Q92496 578 aa6.35□□□□□ -1.39
CDC42SE1-201ENST00000357235 NXT2Q9NPJ8 142 aaKnown RBP6.35□□□□□ -1.39
CDC42SE1-201ENST00000357235 ATP5LO75964 103 aa6.35□□□□□ -1.39
CDC42SE1-201ENST00000357235 IGLC6P0CF74 106 aa6.35□□□□□ -1.39
CDC42SE1-201ENST00000357235 MDFICQ9P1T7 246 aa6.35□□□□□ -1.39
CDC42SE1-201ENST00000357235 IGKV3-7A0A075B6H7 116 aa6.34□□□□□ -1.39
CDC42SE1-201ENST00000357235 LY6LH3BQJ8 138 aa6.34□□□□□ -1.39
CDC42SE1-201ENST00000357235 RNF5Q99942 180 aa6.34□□□□□ -1.39
CDC42SE1-201ENST00000357235 WIPF1O43516 503 aa6.34□□□□□ -1.39
CDC42SE1-201ENST00000357235 TCL1BO95988 128 aa6.34□□□□□ -1.39
CDC42SE1-201ENST00000357235 LINC00694P0DN24 101 aa6.34□□□□□ -1.39
CDC42SE1-201ENST00000357235 UBE2D3P61077 147 aa6.34□□□□□ -1.39
CDC42SE1-201ENST00000357235 UBE2D2P62837 147 aa6.34□□□□□ -1.39
CDC42SE1-201ENST00000357235 CLEC19AQ6UXS0 136 aa6.34□□□□□ -1.39
CDC42SE1-201ENST00000357235 SBSPONQ8IVN8 264 aa6.34□□□□□ -1.39
CDC42SE1-201ENST00000357235 M0R381 172 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 TGFAP01135 160 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 C15orf53Q8NAA6 179 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 TIMD4Q96H15 378 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 COL12A1Q99715 3063 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 MAP1AP78559 2803 aaPredicted RBP6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 IGKV3D-20A0A0C4DH25 116 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 LINC01619G3V211 115 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 LINC01559Q495D7 138 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 LINC00527Q9UJ94 153 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 G3V318 75 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 Q8NA96 180 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 AGPAT4-IT1Q9H0P7 198 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 C11orf21Q9P2W6 132 aa6.33□□□□□ -1.4
CDC42SE1-201ENST00000357235 LOC107984640A0A0U1RRK4 108 aa6.32□□□□□ -1.4
CDC42SE1-201ENST00000357235 SLC25A20O43772 301 aa6.32□□□□□ -1.4
CDC42SE1-201ENST00000357235 RPL11P62913 178 aaKnown RBP6.32□□□□□ -1.4
CDC42SE1-201ENST00000357235 VMO1Q7Z5L0 202 aa6.32□□□□□ -1.4
CDC42SE1-201ENST00000357235 OR11H6Q8NGC7 330 aa6.32□□□□□ -1.4
CDC42SE1-201ENST00000357235 LINC01587Q99440 93 aa6.32□□□□□ -1.4
CDC42SE1-201ENST00000357235 RAXQ9Y2V3 346 aa6.32□□□□□ -1.4
CDC42SE1-201ENST00000357235 S100A4P26447 101 aaKnown RBP6.32□□□□□ -1.4
CDC42SE1-201ENST00000357235 SRSF9Q13242 221 aaKnown RBP eCLIP6.32□□□□□ -1.4
CDC42SE1-201ENST00000357235 LAGE3Q14657 143 aa6.32□□□□□ -1.4
CDC42SE1-201ENST00000357235 ZNF575Q86XF7 245 aa6.32□□□□□ -1.4
CDC42SE1-201ENST00000357235 PTPRQQ9UMZ3 2332 aa6.32□□□□□ -1.4
CDC42SE1-201ENST00000357235 MGPP08493 103 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 DEFB1P60022 68 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 Q8N8P6 123 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 NPBQ8NG41 125 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 CHCHD5Q9BSY4 110 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 ZFHX3Q15911 3703 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 CELSR1Q9NYQ6 3014 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 UBE2D1P51668 147 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 IGHV7-81A0A0B4J1V7 117 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 TRAV8-4A0A0B4J246 113 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 C9JAW5 83 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 BUB3O43684 328 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 IGF2RP11717 2491 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 EMP1P54849 157 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 SCGB1D4Q6XE38 83 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 FAM19A5Q7Z5A7 132 aaPredicted RBP6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 C16orf92Q96LL3 132 aa6.31□□□□□ -1.4
CDC42SE1-201ENST00000357235 TRAV2A0A0B4J234 112 aa6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 J3KT08 172 aa6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 ATP6V0E1O15342 81 aa6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 IGF1P05019 195 aa6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 PLNP26678 52 aa6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 MRPL23Q16540 153 aaKnown RBP6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 SCGB3A1Q96QR1 104 aa6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 CITED2Q99967 270 aaPredicted RBP6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 VKORC1Q9BQB6 163 aa6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 CCL21O00585 134 aa6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 DUSP14O95147 198 aaKnown RBP6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 Q8N1Y9 231 aa6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 C14orf178Q8N769 122 aaPredicted RBP6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 NTN5Q8WTR8 489 aaPredicted RBP6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 ODF3Q96PU9 254 aa6.3□□□□□ -1.4
CDC42SE1-201ENST00000357235 IGHV3OR16-10A0A075B7F0 116 aa6.29□□□□□ -1.4
CDC42SE1-201ENST00000357235 NPFFO15130 113 aa6.29□□□□□ -1.4
CDC42SE1-201ENST00000357235 LY6DQ14210 128 aa6.29□□□□□ -1.4
CDC42SE1-201ENST00000357235 C9orf153Q5TBE3 101 aa6.29□□□□□ -1.4
CDC42SE1-201ENST00000357235 OR13C6PQ8NH95 151 aa6.29□□□□□ -1.4
CDC42SE1-201ENST00000357235 CHD8Q9HCK8 2581 aa6.29□□□□□ -1.4
CDC42SE1-201ENST00000357235 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.29□□□□□ -1.44e-10■■□□□ 12
CDC42SE1-201ENST00000357235 LGALS1P09382 135 aaKnown RBP6.29□□□□□ -1.4
CDC42SE1-201ENST00000357235 TMEM219Q86XT9 240 aa6.29□□□□□ -1.4
CDC42SE1-201ENST00000357235 LRRC75A-AS1Q8N1F1 130 aa6.29□□□□□ -1.4
CDC42SE1-201ENST00000357235 C10orf126Q8N4M7 172 aa6.29□□□□□ -1.4
CDC42SE1-201ENST00000357235 RPL39LQ96EH5 51 aaKnown RBP6.29□□□□□ -1.4
CDC42SE1-201ENST00000357235 METTL26Q96S19 204 aa6.29□□□□□ -1.4
CDC42SE1-201ENST00000357235 CREBBPQ92793 2442 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 SPG11Q96JI7 2443 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 NDUFA11Q86Y39 141 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 LY6G5BQ8NDX9 201 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 ACACBO00763 2458 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms