RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 TIMD4Q96H15 378 aa11.59□□□□□ -0.55
VAT1-201ENST00000355653 NBASA2RRP1 2371 aa11.59□□□□□ -0.55
VAT1-201ENST00000355653 CEP295Q9C0D2 2601 aa11.59□□□□□ -0.55
VAT1-201ENST00000355653 M0R1W7 72 aa11.59□□□□□ -0.55
VAT1-201ENST00000355653 COX6B1P14854 86 aa11.59□□□□□ -0.55
VAT1-201ENST00000355653 FAM110DQ8TAY7 271 aaPredicted RBP11.59□□□□□ -0.55
VAT1-201ENST00000355653 KIR2DL4Q99706 377 aa11.59□□□□□ -0.55
VAT1-201ENST00000355653 SPTA1P02549 2419 aa11.58□□□□□ -0.56
VAT1-201ENST00000355653 C11orf86A6NJI1 115 aa11.58□□□□□ -0.56
VAT1-201ENST00000355653 SCGB1C2P0DMR2 95 aa11.58□□□□□ -0.56
VAT1-201ENST00000355653 TCF15Q12870 199 aa11.58□□□□□ -0.56
VAT1-201ENST00000355653 NDUFA11Q86Y39 141 aa11.58□□□□□ -0.56
VAT1-201ENST00000355653 PPDPFLQ8WWR9 84 aa11.58□□□□□ -0.56
VAT1-201ENST00000355653 CD7P09564 240 aa11.58□□□□□ -0.56
VAT1-201ENST00000355653 UBE2D3P61077 147 aa11.58□□□□□ -0.56
VAT1-201ENST00000355653 UBE2D2P62837 147 aa11.58□□□□□ -0.56
VAT1-201ENST00000355653 TEN1Q86WV5 123 aa11.58□□□□□ -0.56
VAT1-201ENST00000355653 C20orf173Q96LM9 149 aa11.58□□□□□ -0.56
VAT1-201ENST00000355653 Q6ZS46 218 aa11.57□□□□□ -0.56
VAT1-201ENST00000355653 HRNRQ86YZ3 2850 aaPredicted RBP11.57□□□□□ -0.56
VAT1-201ENST00000355653 ARL3P36405 182 aa11.57□□□□□ -0.56
VAT1-201ENST00000355653 ASIPP42127 132 aa11.57□□□□□ -0.56
VAT1-201ENST00000355653 A8MWV9 139 aa11.56□□□□□ -0.56
VAT1-201ENST00000355653 LYRM7Q5U5X0 104 aa11.56□□□□□ -0.56
VAT1-201ENST00000355653 RNF183Q96D59 192 aa11.56□□□□□ -0.56
VAT1-201ENST00000355653 TP53TG1Q9Y2A0 90 aa11.56□□□□□ -0.56
VAT1-201ENST00000355653 A0A0J9YY99 117 aa11.56□□□□□ -0.56
VAT1-201ENST00000355653 RNF223E7ERA6 249 aa11.56□□□□□ -0.56
VAT1-201ENST00000355653 CRYGDP07320 174 aa11.56□□□□□ -0.56
VAT1-201ENST00000355653 ANXA2RQ3ZCQ2 193 aa11.56□□□□□ -0.56
VAT1-201ENST00000355653 GNRH2O43555 120 aa11.55□□□□□ -0.56
VAT1-201ENST00000355653 TMEM170BQ5T4T1 132 aa11.55□□□□□ -0.56
VAT1-201ENST00000355653 ANKRD29Q8N6D5 301 aa11.55□□□□□ -0.56
VAT1-201ENST00000355653 EEF1AKMT3Q96AZ1 226 aa11.55□□□□□ -0.56
VAT1-201ENST00000355653 MRPL53Q96EL3 112 aaKnown RBP11.55□□□□□ -0.56
VAT1-201ENST00000355653 IGKV3-7A0A075B6H7 116 aa11.55□□□□□ -0.56
VAT1-201ENST00000355653 GATA3P23771 443 aa11.55□□□□□ -0.56
VAT1-201ENST00000355653 RNASE4P34096 147 aaKnown RBP11.55□□□□□ -0.56
VAT1-201ENST00000355653 HERVK_113P61574 105 aa11.55□□□□□ -0.56
VAT1-201ENST00000355653 CFC1BP0CG36 223 aa11.54□□□□□ -0.56
VAT1-201ENST00000355653 CFC1P0CG37 223 aa11.54□□□□□ -0.56
VAT1-201ENST00000355653 RPL39P62891 51 aaKnown RBP11.54□□□□□ -0.56
VAT1-201ENST00000355653 RAX2Q96IS3 184 aa11.54□□□□□ -0.56
VAT1-201ENST00000355653 LINC00527Q9UJ94 153 aa11.54□□□□□ -0.56
VAT1-201ENST00000355653 IGLV4-69A0A075B6H9 119 aa11.54□□□□□ -0.56
VAT1-201ENST00000355653 TRAV21A0A0B4J279 112 aa11.54□□□□□ -0.56
VAT1-201ENST00000355653 H7C2G1 150 aa11.54□□□□□ -0.56
VAT1-201ENST00000355653 TSPEAR-AS2P59090 65 aa11.54□□□□□ -0.56
VAT1-201ENST00000355653 RPL11P62913 178 aaKnown RBP11.54□□□□□ -0.56
VAT1-201ENST00000355653 TSHBP01222 138 aa11.53□□□□□ -0.56
VAT1-201ENST00000355653 EBI3Q14213 229 aa11.53□□□□□ -0.56
VAT1-201ENST00000355653 ZFAND2AQ8N6M9 145 aa11.53□□□□□ -0.56
VAT1-201ENST00000355653 OR10J6PQ8NGY7 276 aa11.53□□□□□ -0.56
VAT1-201ENST00000355653 F6UB75 175 aa11.53□□□□□ -0.56
VAT1-201ENST00000355653 ZNF688P0C7X2 276 aa11.53□□□□□ -0.56
VAT1-201ENST00000355653 ZFP36P26651 326 aaKnown RBP11.53□□□□□ -0.56
VAT1-201ENST00000355653 ANAPC13Q9BS18 74 aa11.53□□□□□ -0.56
VAT1-201ENST00000355653 C10orf126Q8N4M7 172 aa11.52□□□□□ -0.57
VAT1-201ENST00000355653 MUC6Q6W4X9 2439 aa11.52□□□□□ -0.57
VAT1-201ENST00000355653 TRBV20-1A0A075B6N2 111 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 IGHV3-30P01768 117 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 IGHV3-30-5P0DP03 117 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 MINOS1Q5TGZ0 78 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 GPHB5Q86YW7 130 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 ERG28Q9UKR5 140 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 MINOS1-NBL1R4GNA1 71 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 CELSR1Q9NYQ6 3014 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 OOSP1A8MZH6 123 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 C9orf139Q6ZV77 190 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 JPT2Q9H910 190 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 PMVKQ15126 192 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 PRO1854Q9UHT4 67 aa11.51□□□□□ -0.57
VAT1-201ENST00000355653 TRBV7-1A0A0A6YYK4 115 aa11.5□□□□□ -0.57
VAT1-201ENST00000355653 C9JAW5 83 aa11.5□□□□□ -0.57
VAT1-201ENST00000355653 F5H697 171 aa11.5□□□□□ -0.57
VAT1-201ENST00000355653 CDSNQ15517 529 aa11.5□□□□□ -0.57
VAT1-201ENST00000355653 TRPT1Q86TN4 253 aaKnown RBP11.5□□□□□ -0.57
VAT1-201ENST00000355653 LINC00477Q96M19 166 aa11.5□□□□□ -0.57
VAT1-201ENST00000355653 PTPRQQ9UMZ3 2332 aa11.5□□□□□ -0.57
VAT1-201ENST00000355653 A0A087WWL8 130 aa11.5□□□□□ -0.57
VAT1-201ENST00000355653 CENPVL3A0A0U1RRI6 287 aa11.5□□□□□ -0.57
VAT1-201ENST00000355653 ITLN2Q8WWU7 325 aaPredicted RBP11.5□□□□□ -0.57
VAT1-201ENST00000355653 IGHV3-64A0A075B6Q5 118 aa11.49□□□□□ -0.57
VAT1-201ENST00000355653 RNASE3P12724 160 aaKnown RBP11.49□□□□□ -0.57
VAT1-201ENST00000355653 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
VAT1-201ENST00000355653 SS18L2Q9UHA2 77 aa11.49□□□□□ -0.57
VAT1-201ENST00000355653 U3KQE9 123 aa11.49□□□□□ -0.57
VAT1-201ENST00000355653 SLC25A20O43772 301 aa11.49□□□□□ -0.57
VAT1-201ENST00000355653 FOXC1Q12948 553 aa11.49□□□□□ -0.57
VAT1-201ENST00000355653 ZFAND6Q6FIF0 208 aa11.49□□□□□ -0.57
VAT1-201ENST00000355653 UNQ9165/PRO28630Q6UXU0 137 aa11.49□□□□□ -0.57
VAT1-201ENST00000355653 TMEM219Q86XT9 240 aa11.49□□□□□ -0.57
VAT1-201ENST00000355653 TEX29Q8N6K0 151 aa11.49□□□□□ -0.57
VAT1-201ENST00000355653 SLC25A29Q8N8R3 303 aa11.49□□□□□ -0.57
VAT1-201ENST00000355653 ZNRF2Q8NHG8 242 aa11.49□□□□□ -0.57
VAT1-201ENST00000355653 IGIPA6NJ69 53 aa11.48□□□□□ -0.57
VAT1-201ENST00000355653 LGALS3P17931 250 aaKnown RBP11.48□□□□□ -0.57
VAT1-201ENST00000355653 PAPPA-AS1Q5QFB9 102 aa11.48□□□□□ -0.57
VAT1-201ENST00000355653 LENEPQ9Y5L5 61 aa11.48□□□□□ -0.57
VAT1-201ENST00000355653 MUC4Q99102 2169 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms