RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 GAGE13Q4V321 117 aa10.98□□□□□ -0.65
GFRA1-201ENST00000355422 AZU1P20160 251 aa10.97□□□□□ -0.65
GFRA1-201ENST00000355422 SCGB2A2Q13296 93 aa10.97□□□□□ -0.65
GFRA1-201ENST00000355422 DEFB104AQ8WTQ1 72 aa10.97□□□□□ -0.65
GFRA1-201ENST00000355422 SPTBN1Q01082 2364 aaKnown RBP10.97□□□□□ -0.65
GFRA1-201ENST00000355422 HOXA3O43365 443 aaPredicted RBP10.97□□□□□ -0.65
GFRA1-201ENST00000355422 RNASE3P12724 160 aaKnown RBP10.97□□□□□ -0.65
GFRA1-201ENST00000355422 MORN3Q6PF18 240 aaPredicted RBP10.97□□□□□ -0.65
GFRA1-201ENST00000355422 ZNF815PA8K554 130 aa10.96□□□□□ -0.65
GFRA1-201ENST00000355422 IGHV3-11P01762 117 aa10.96□□□□□ -0.65
GFRA1-201ENST00000355422 ATP6V0BQ99437 205 aa10.96□□□□□ -0.65
GFRA1-201ENST00000355422 SPAG8Q99932 426 aaPredicted RBP10.96□□□□□ -0.65
GFRA1-201ENST00000355422 PRO0461Q9UI25 63 aa10.96□□□□□ -0.65
GFRA1-201ENST00000355422 GAGE12HA6NDE8 117 aa10.96□□□□□ -0.66
GFRA1-201ENST00000355422 NDUFA4O00483 81 aa10.96□□□□□ -0.66
GFRA1-201ENST00000355422 CD300EQ496F6 205 aaPredicted RBP10.96□□□□□ -0.66
GFRA1-201ENST00000355422 PLEKHB2Q96CS7 222 aa10.96□□□□□ -0.66
GFRA1-201ENST00000355422 SIGMAR1Q99720 223 aa10.96□□□□□ -0.66
GFRA1-201ENST00000355422 DUSP14O95147 198 aaKnown RBP10.95□□□□□ -0.66
GFRA1-201ENST00000355422 BRD3OSQ6XYD6 125 aa10.95□□□□□ -0.66
GFRA1-201ENST00000355422 FAM19A4Q96LR4 140 aa10.95□□□□□ -0.66
GFRA1-201ENST00000355422 PGPEP1Q9NXJ5 209 aa10.95□□□□□ -0.66
GFRA1-201ENST00000355422 ATRXP46100 2492 aa10.95□□□□□ -0.66
GFRA1-201ENST00000355422 SMAGPQ0VAQ4 97 aa10.95□□□□□ -0.66
GFRA1-201ENST00000355422 SCGB1D4Q6XE38 83 aa10.95□□□□□ -0.66
GFRA1-201ENST00000355422 KLHL30-AS1Q8NEE0 82 aa10.95□□□□□ -0.66
GFRA1-201ENST00000355422 J3QR89 54 aa10.94□□□□□ -0.66
GFRA1-201ENST00000355422 CRYGDP07320 174 aa10.94□□□□□ -0.66
GFRA1-201ENST00000355422 MED14OSP0DP75 135 aa10.94□□□□□ -0.66
GFRA1-201ENST00000355422 INSL3P51460 131 aa10.94□□□□□ -0.66
GFRA1-201ENST00000355422 EMP1P54849 157 aa10.94□□□□□ -0.66
GFRA1-201ENST00000355422 TSHBP01222 138 aa10.93□□□□□ -0.66
GFRA1-201ENST00000355422 COX6B1P14854 86 aa10.93□□□□□ -0.66
GFRA1-201ENST00000355422 CRIP2P52943 208 aaPredicted RBP10.93□□□□□ -0.66
GFRA1-201ENST00000355422 MRPL16Q9NX20 251 aaKnown RBP10.93□□□□□ -0.66
GFRA1-201ENST00000355422 AKAP6Q13023 2319 aa10.93□□□□□ -0.66
GFRA1-201ENST00000355422 COL6A6A6NMZ7 2263 aa10.93□□□□□ -0.66
GFRA1-201ENST00000355422 SRD5A1P18405 259 aa10.93□□□□□ -0.66
GFRA1-201ENST00000355422 SRSF9Q13242 221 aaKnown RBP eCLIP10.93□□□□□ -0.66
GFRA1-201ENST00000355422 LY6EQ16553 131 aa10.93□□□□□ -0.66
GFRA1-201ENST00000355422 JPT2Q9H910 190 aa10.93□□□□□ -0.66
GFRA1-201ENST00000355422 LINC01549A6NIU2 74 aa10.92□□□□□ -0.66
GFRA1-201ENST00000355422 LINC00315P59091 139 aa10.92□□□□□ -0.66
GFRA1-201ENST00000355422 KIF25-AS1Q9Y6Z4 181 aa10.92□□□□□ -0.66
GFRA1-201ENST00000355422 C11orf86A6NJI1 115 aa10.92□□□□□ -0.66
GFRA1-201ENST00000355422 PPP1R17O96001 155 aa10.92□□□□□ -0.66
GFRA1-201ENST00000355422 SFTA2Q6UW10 78 aa10.92□□□□□ -0.66
GFRA1-201ENST00000355422 APRG1Q8IVJ8 170 aa10.92□□□□□ -0.66
GFRA1-201ENST00000355422 WFDC12Q8WWY7 111 aa10.92□□□□□ -0.66
GFRA1-201ENST00000355422 RHPN1-AS1Q9BWJ2 59 aa10.92□□□□□ -0.66
GFRA1-201ENST00000355422 TP53TG1Q9Y2A0 90 aa10.92□□□□□ -0.66
GFRA1-201ENST00000355422 POM121L12Q8N7R1 296 aa10.91□□□□□ -0.66
GFRA1-201ENST00000355422 IGLV4-69A0A075B6H9 119 aa10.91□□□□□ -0.66
GFRA1-201ENST00000355422 IGHV1-69DA0A0B4J2H0 117 aa10.91□□□□□ -0.66
GFRA1-201ENST00000355422 IGHV1-69P01742 117 aa10.91□□□□□ -0.66
GFRA1-201ENST00000355422 PF4V1P10720 104 aa10.9□□□□□ -0.66
GFRA1-201ENST00000355422 RPL39P62891 51 aaKnown RBP10.9□□□□□ -0.66
GFRA1-201ENST00000355422 SPATA25Q9BR10 227 aa10.9□□□□□ -0.66
GFRA1-201ENST00000355422 IGF2RP11717 2491 aa10.9□□□□□ -0.66
GFRA1-201ENST00000355422 MUC4Q99102 2169 aa10.9□□□□□ -0.66
GFRA1-201ENST00000355422 A0A087WWL8 130 aa10.9□□□□□ -0.66
GFRA1-201ENST00000355422 TMEM238LA0A1B0GVL6 79 aa10.9□□□□□ -0.66
GFRA1-201ENST00000355422 A6NJY4 79 aa10.9□□□□□ -0.66
GFRA1-201ENST00000355422 EDN2P20800 178 aa10.9□□□□□ -0.66
GFRA1-201ENST00000355422 UBE2D1P51668 147 aa10.9□□□□□ -0.66
GFRA1-201ENST00000355422 ZFP2Q6ZN57 461 aa10.9□□□□□ -0.66
GFRA1-201ENST00000355422 IGIPA6NJ69 53 aa10.89□□□□□ -0.67
GFRA1-201ENST00000355422 NXPH4O95158 308 aa10.89□□□□□ -0.67
GFRA1-201ENST00000355422 SVIPQ8NHG7 77 aa10.89□□□□□ -0.67
GFRA1-201ENST00000355422 USMG5Q96IX5 58 aa10.89□□□□□ -0.67
GFRA1-201ENST00000355422 IGHV4OR15-8A0A075B7B6 117 aa10.89□□□□□ -0.67
GFRA1-201ENST00000355422 A0A087WW49 117 aa10.89□□□□□ -0.67
GFRA1-201ENST00000355422 LOC107984156A0A0G2JMH3 177 aa10.89□□□□□ -0.67
GFRA1-201ENST00000355422 APOMO95445 188 aa10.89□□□□□ -0.67
GFRA1-201ENST00000355422 TSPAN13O95857 204 aa10.89□□□□□ -0.67
GFRA1-201ENST00000355422 POLR2KP53803 58 aaKnown RBP10.89□□□□□ -0.67
GFRA1-201ENST00000355422 SUMO4Q6EEV6 95 aa10.89□□□□□ -0.67
GFRA1-201ENST00000355422 ARL17AQ8IVW1 177 aa10.89□□□□□ -0.67
GFRA1-201ENST00000355422 F5H697 171 aa10.88□□□□□ -0.67
GFRA1-201ENST00000355422 NDUFS8O00217 210 aa10.88□□□□□ -0.67
GFRA1-201ENST00000355422 PSMB2P49721 201 aa10.88□□□□□ -0.67
GFRA1-201ENST00000355422 BLCAPP62952 87 aa10.88□□□□□ -0.67
GFRA1-201ENST00000355422 FAM159AQ6UWV7 190 aa10.88□□□□□ -0.67
GFRA1-201ENST00000355422 Q6ZS46 218 aa10.88□□□□□ -0.67
GFRA1-201ENST00000355422 SCGB1A1P11684 91 aa10.88□□□□□ -0.67
GFRA1-201ENST00000355422 SMCPP49901 116 aaPredicted RBP10.88□□□□□ -0.67
GFRA1-201ENST00000355422 PMVKQ15126 192 aa10.88□□□□□ -0.67
GFRA1-201ENST00000355422 DLX4Q92988 240 aaPredicted RBP10.88□□□□□ -0.67
GFRA1-201ENST00000355422 TRBV7-9A0A0J9YWB2 115 aa10.87□□□□□ -0.67
GFRA1-201ENST00000355422 A0A0J9YY99 117 aa10.87□□□□□ -0.67
GFRA1-201ENST00000355422 KLLNB2CW77 178 aa10.87□□□□□ -0.67
GFRA1-201ENST00000355422 IGHG2P01859 326 aa10.87□□□□□ -0.67
GFRA1-201ENST00000355422 CD7P09564 240 aa10.87□□□□□ -0.67
GFRA1-201ENST00000355422 CFAP126Q5VTH2 177 aa10.87□□□□□ -0.67
GFRA1-201ENST00000355422 IGHV4-39P01824 125 aa10.87□□□□□ -0.67
GFRA1-201ENST00000355422 IGHV4-38-2P0DP08 117 aa10.87□□□□□ -0.67
GFRA1-201ENST00000355422 UCNP55089 124 aa10.87□□□□□ -0.67
GFRA1-201ENST00000355422 HERVK_113P61574 105 aa10.87□□□□□ -0.67
GFRA1-201ENST00000355422 TRAV12-3A0A0B4J271 114 aa10.86□□□□□ -0.67
GFRA1-201ENST00000355422 H3BUX3 64 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms