RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 LYRM7Q5U5X0 104 aa14.24□□□□□ -0.13
SCARF1-202ENST00000348987 SBSPONQ8IVN8 264 aa14.23□□□□□ -0.13
SCARF1-202ENST00000348987 ODF3BA8MYP8 253 aa14.23□□□□□ -0.13
SCARF1-202ENST00000348987 SCGB1C2P0DMR2 95 aa14.23□□□□□ -0.13
SCARF1-202ENST00000348987 PRTN3P24158 256 aa14.23□□□□□ -0.13
SCARF1-202ENST00000348987 CITED1Q99966 193 aa14.23□□□□□ -0.13
SCARF1-202ENST00000348987 AGPAT4-IT1Q9H0P7 198 aa14.23□□□□□ -0.13
SCARF1-202ENST00000348987 CTSGP08311 255 aa14.22□□□□□ -0.13
SCARF1-202ENST00000348987 ORMDL2Q53FV1 153 aa14.22□□□□□ -0.13
SCARF1-202ENST00000348987 TRBV20-1A0A075B6N2 111 aa14.22□□□□□ -0.13
SCARF1-202ENST00000348987 SPRY2O43597 315 aa14.22□□□□□ -0.13
SCARF1-202ENST00000348987 FBXL19-AS1Q494R0 122 aa14.22□□□□□ -0.13
SCARF1-202ENST00000348987 IGHV3-66A0A0C4DH42 116 aa14.21□□□□□ -0.13
SCARF1-202ENST00000348987 TMEM262E9PQX1 116 aa14.21□□□□□ -0.13
SCARF1-202ENST00000348987 CFC1BP0CG36 223 aa14.21□□□□□ -0.13
SCARF1-202ENST00000348987 CFC1P0CG37 223 aa14.21□□□□□ -0.13
SCARF1-202ENST00000348987 AJUBAQ96IF1 538 aa14.21□□□□□ -0.13
SCARF1-202ENST00000348987 KLRB1Q12918 225 aa14.21□□□□□ -0.14
SCARF1-202ENST00000348987 C2orf66Q6UXQ4 117 aa14.21□□□□□ -0.14
SCARF1-202ENST00000348987 ZFP36P26651 326 aaKnown RBP14.2□□□□□ -0.14
SCARF1-202ENST00000348987 EMP1P54849 157 aa14.2□□□□□ -0.14
SCARF1-202ENST00000348987 SUMO2P61956 95 aaKnown RBP14.2□□□□□ -0.14
SCARF1-202ENST00000348987 RPL39LQ96EH5 51 aaKnown RBP14.2□□□□□ -0.14
SCARF1-202ENST00000348987 A0A1W2PPR1 153 aa14.2□□□□□ -0.14
SCARF1-202ENST00000348987 Q6ZS46 218 aa14.2□□□□□ -0.14
SCARF1-202ENST00000348987 TIMD4Q96H15 378 aa14.2□□□□□ -0.14
SCARF1-202ENST00000348987 A0A0J9YY99 117 aa14.19□□□□□ -0.14
SCARF1-202ENST00000348987 VMO1Q7Z5L0 202 aa14.19□□□□□ -0.14
SCARF1-202ENST00000348987 IGHV3OR16-13A0A075B7E8 117 aa14.19□□□□□ -0.14
SCARF1-202ENST00000348987 IGHV3-74A0A0B4J1X5 117 aa14.19□□□□□ -0.14
SCARF1-202ENST00000348987 SRD5A1P18405 259 aa14.19□□□□□ -0.14
SCARF1-202ENST00000348987 CRIP2P52943 208 aaPredicted RBP14.19□□□□□ -0.14
SCARF1-202ENST00000348987 CFAP161Q6P656 301 aa14.19□□□□□ -0.14
SCARF1-202ENST00000348987 TRAV8-2A0A0B4J237 113 aa14.18□□□□□ -0.14
SCARF1-202ENST00000348987 TRAV4A0A0B4J268 109 aa14.18□□□□□ -0.14
SCARF1-202ENST00000348987 RHODO00212 210 aa14.18□□□□□ -0.14
SCARF1-202ENST00000348987 SLC50A1Q9BRV3 221 aa14.18□□□□□ -0.14
SCARF1-202ENST00000348987 SPG11Q96JI7 2443 aa14.18□□□□□ -0.14
SCARF1-202ENST00000348987 PKD1L2Q7Z442 2459 aa14.18□□□□□ -0.14
SCARF1-202ENST00000348987 CRLF1O75462 422 aa14.18□□□□□ -0.14
SCARF1-202ENST00000348987 GAGE2BQ13066 116 aa14.18□□□□□ -0.14
SCARF1-202ENST00000348987 GAGE2EQ4V326 116 aa14.18□□□□□ -0.14
SCARF1-202ENST00000348987 C11orf71Q6IPW1 123 aa14.18□□□□□ -0.14
SCARF1-202ENST00000348987 C10orf126Q8N4M7 172 aa14.18□□□□□ -0.14
SCARF1-202ENST00000348987 GAGE2DQ9UEU5 116 aa14.18□□□□□ -0.14
SCARF1-202ENST00000348987 CCDC179H3BU77 68 aa14.17□□□□□ -0.14
SCARF1-202ENST00000348987 SLC25A20O43772 301 aa14.17□□□□□ -0.14
SCARF1-202ENST00000348987 SHISA2Q6UWI4 295 aa14.17□□□□□ -0.14
SCARF1-202ENST00000348987 IGHV4-4A0A075B6R2 117 aa14.17□□□□□ -0.14
SCARF1-202ENST00000348987 RBAKDNA6NC62 111 aa14.17□□□□□ -0.14
SCARF1-202ENST00000348987 M0R1W7 72 aa14.17□□□□□ -0.14
SCARF1-202ENST00000348987 NDUFV3P56181 108 aaKnown RBP14.17□□□□□ -0.14
SCARF1-202ENST00000348987 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.17□□□□□ -0.14
SCARF1-202ENST00000348987 TRPT1Q86TN4 253 aaKnown RBP14.17□□□□□ -0.14
SCARF1-202ENST00000348987 C9JAW5 83 aa14.16□□□□□ -0.14
SCARF1-202ENST00000348987 M0R381 172 aa14.16□□□□□ -0.14
SCARF1-202ENST00000348987 IGHV3-30P01768 117 aa14.16□□□□□ -0.14
SCARF1-202ENST00000348987 IGHV3-30-5P0DP03 117 aa14.16□□□□□ -0.14
SCARF1-202ENST00000348987 UCNP55089 124 aa14.16□□□□□ -0.14
SCARF1-202ENST00000348987 DEFB104AQ8WTQ1 72 aa14.16□□□□□ -0.14
SCARF1-202ENST00000348987 RAX2Q96IS3 184 aa14.16□□□□□ -0.14
SCARF1-202ENST00000348987 C11orf86A6NJI1 115 aa14.16□□□□□ -0.14
SCARF1-202ENST00000348987 SNCGO76070 127 aa14.16□□□□□ -0.14
SCARF1-202ENST00000348987 CRYGDP07320 174 aa14.16□□□□□ -0.14
SCARF1-202ENST00000348987 CFAP46Q8IYW2 2715 aa14.16□□□□□ -0.14
SCARF1-202ENST00000348987 Q8N6K4 173 aa14.15□□□□□ -0.14
SCARF1-202ENST00000348987 IGHV7-81A0A0B4J1V7 117 aa14.15□□□□□ -0.14
SCARF1-202ENST00000348987 PRO1854Q9UHT4 67 aa14.15□□□□□ -0.14
SCARF1-202ENST00000348987 PIEZO1Q92508 2521 aa14.15□□□□□ -0.14
SCARF1-202ENST00000348987 TRBV7-9A0A0J9YWB2 115 aa14.14□□□□□ -0.15
SCARF1-202ENST00000348987 J3KRW8 73 aa14.14□□□□□ -0.15
SCARF1-202ENST00000348987 BUB3O43684 328 aa14.14□□□□□ -0.15
SCARF1-202ENST00000348987 GAGE12JA6NER3 117 aa14.14□□□□□ -0.15
SCARF1-202ENST00000348987 GAGE7O76087 117 aa14.14□□□□□ -0.15
SCARF1-202ENST00000348987 DUSP14O95147 198 aaKnown RBP14.14□□□□□ -0.15
SCARF1-202ENST00000348987 GAGE12FP0CL80 117 aa14.14□□□□□ -0.15
SCARF1-202ENST00000348987 GAGE12GP0CL81 117 aa14.14□□□□□ -0.15
SCARF1-202ENST00000348987 GAGE12IP0CL82 117 aa14.14□□□□□ -0.15
SCARF1-202ENST00000348987 GAGE4Q13068 117 aa14.14□□□□□ -0.15
SCARF1-202ENST00000348987 C14orf178Q8N769 122 aaPredicted RBP14.14□□□□□ -0.15
SCARF1-202ENST00000348987 CSMD2Q7Z408 3487 aa14.14□□□□□ -0.15
SCARF1-202ENST00000348987 IGHV3-49A0A0A0MS15 119 aa14.13□□□□□ -0.15
SCARF1-202ENST00000348987 HERV-K104P63124 156 aa14.13□□□□□ -0.15
SCARF1-202ENST00000348987 CRYBG3Q68DQ2 2970 aa14.13□□□□□ -0.15
SCARF1-202ENST00000348987 TSPEAR-AS2P59090 65 aa14.13□□□□□ -0.15
SCARF1-202ENST00000348987 HIF1ANQ9NWT6 349 aa14.13□□□□□ -0.15
SCARF1-202ENST00000348987 UTP20O75691 2785 aaKnown RBP14.13□□□□□ -0.15
SCARF1-202ENST00000348987 IGLV4-69A0A075B6H9 119 aa14.12□□□□□ -0.15
SCARF1-202ENST00000348987 RNF223E7ERA6 249 aa14.12□□□□□ -0.15
SCARF1-202ENST00000348987 TTC32Q5I0X7 151 aa14.12□□□□□ -0.15
SCARF1-202ENST00000348987 PRR9Q5T870 116 aa14.12□□□□□ -0.15
SCARF1-202ENST00000348987 SMIM20Q8N5G0 67 aa14.12□□□□□ -0.15
SCARF1-202ENST00000348987 Q8N9W7 124 aa14.12□□□□□ -0.15
SCARF1-202ENST00000348987 FLNCQ14315 2725 aa14.12□□□□□ -0.15
SCARF1-202ENST00000348987 H7C2G1 150 aa14.11□□□□□ -0.15
SCARF1-202ENST00000348987 MGPP08493 103 aa14.11□□□□□ -0.15
SCARF1-202ENST00000348987 ASIPP42127 132 aa14.11□□□□□ -0.15
SCARF1-202ENST00000348987 SLC25A29Q8N8R3 303 aa14.11□□□□□ -0.15
SCARF1-202ENST00000348987 CELSR2Q9HCU4 2923 aa14.11□□□□□ -0.15
SCARF1-202ENST00000348987 IFITM1P13164 125 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 242.5 ms