RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 A0A1B0GX51 115 aa12.14□□□□□ -0.47
SRPK1-201ENST00000346162 A4D1N5 150 aa12.14□□□□□ -0.47
SRPK1-201ENST00000346162 H3BRN7 92 aa12.14□□□□□ -0.47
SRPK1-201ENST00000346162 MSMBP08118 114 aa12.14□□□□□ -0.47
SRPK1-201ENST00000346162 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
SRPK1-201ENST00000346162 DAZ1Q9NQZ3 744 aaKnown RBP12.14□□□□□ -0.47
SRPK1-201ENST00000346162 IGHV1-69DA0A0B4J2H0 117 aa12.14□□□□□ -0.47
SRPK1-201ENST00000346162 IGHV1-69P01742 117 aa12.14□□□□□ -0.47
SRPK1-201ENST00000346162 LOXL1Q08397 574 aaPredicted RBP12.14□□□□□ -0.47
SRPK1-201ENST00000346162 MSMPQ1L6U9 139 aa12.14□□□□□ -0.47
SRPK1-201ENST00000346162 A0A1B0GXF2 115 aa12.14□□□□□ -0.47
SRPK1-201ENST00000346162 CCDC179H3BU77 68 aa12.14□□□□□ -0.47
SRPK1-201ENST00000346162 Q6ZPA2 131 aa12.14□□□□□ -0.47
SRPK1-201ENST00000346162 RASL10AQ92737 203 aa12.14□□□□□ -0.47
SRPK1-201ENST00000346162 C10orf142B7Z368 130 aa12.13□□□□□ -0.47
SRPK1-201ENST00000346162 TM2D2Q9BX73 214 aa12.13□□□□□ -0.47
SRPK1-201ENST00000346162 M0QXV9 152 aa12.13□□□□□ -0.47
SRPK1-201ENST00000346162 LINC00158P58513 81 aa12.13□□□□□ -0.47
SRPK1-201ENST00000346162 ZNF491Q8N8L2 437 aa12.13□□□□□ -0.47
SRPK1-201ENST00000346162 MUC22E2RYF6 1773 aaPredicted RBP12.13□□□□□ -0.47
SRPK1-201ENST00000346162 DNAJC30Q96LL9 226 aa12.13□□□□□ -0.47
SRPK1-201ENST00000346162 KIAA1549Q9HCM3 1950 aa12.12□□□□□ -0.47
SRPK1-201ENST00000346162 ZFP2Q6ZN57 461 aa12.12□□□□□ -0.47
SRPK1-201ENST00000346162 PRO3102Q9H379 93 aa12.12□□□□□ -0.47
SRPK1-201ENST00000346162 TLN1Q9Y490 2541 aaKnown RBP12.12□□□□□ -0.47
SRPK1-201ENST00000346162 A0A087WWL8 130 aa12.12□□□□□ -0.47
SRPK1-201ENST00000346162 TMEM86BQ8N661 226 aa12.12□□□□□ -0.47
SRPK1-201ENST00000346162 LEPROTO15243 131 aa12.11□□□□□ -0.47
SRPK1-201ENST00000346162 TCL1BO95988 128 aa12.11□□□□□ -0.47
SRPK1-201ENST00000346162 IGLV2-8P01709 118 aa12.11□□□□□ -0.47
SRPK1-201ENST00000346162 RBMY1FQ15415 496 aaKnown RBP12.11□□□□□ -0.47
SRPK1-201ENST00000346162 TRPT1Q86TN4 253 aaKnown RBP12.11□□□□□ -0.47
SRPK1-201ENST00000346162 FAM167A-AS1Q96KT0 104 aa12.11□□□□□ -0.47
SRPK1-201ENST00000346162 NDUFA12Q9UI09 145 aa12.11□□□□□ -0.47
SRPK1-201ENST00000346162 NCOR2Q9Y618 2525 aa12.11□□□□□ -0.47
SRPK1-201ENST00000346162 PAX4O43316 350 aa12.11□□□□□ -0.47
SRPK1-201ENST00000346162 PRIMA1Q86XR5 153 aa12.11□□□□□ -0.47
SRPK1-201ENST00000346162 EGR2P11161 476 aaPredicted RBP12.11□□□□□ -0.47
SRPK1-201ENST00000346162 SHISA2Q6UWI4 295 aa12.11□□□□□ -0.47
SRPK1-201ENST00000346162 Q8N1Y9 231 aa12.11□□□□□ -0.47
SRPK1-201ENST00000346162 IGF2RP11717 2491 aa12.11□□□□□ -0.47
SRPK1-201ENST00000346162 LINC01356Q8N9X3 169 aa12.1□□□□□ -0.47
SRPK1-201ENST00000346162 MSRB1Q9NZV6 116 aa12.1□□□□□ -0.47
SRPK1-201ENST00000346162 ADARB2-AS1A8MUL3 147 aa12.1□□□□□ -0.47
SRPK1-201ENST00000346162 C17orf77Q96MU5 243 aa12.1□□□□□ -0.47
SRPK1-201ENST00000346162 KMT2EQ8IZD2 1858 aa12.09□□□□□ -0.47
SRPK1-201ENST00000346162 PTPN13Q12923 2485 aa12.09□□□□□ -0.47
SRPK1-201ENST00000346162 TRBV10-2A0A0K0K1G8 114 aa12.09□□□□□ -0.47
SRPK1-201ENST00000346162 PATE2Q6UY27 113 aa12.08□□□□□ -0.48
SRPK1-201ENST00000346162 UQCRQO14949 82 aa12.08□□□□□ -0.48
SRPK1-201ENST00000346162 GATA3P23771 443 aa12.08□□□□□ -0.48
SRPK1-201ENST00000346162 TMEM243Q9BU79 118 aa12.08□□□□□ -0.48
SRPK1-201ENST00000346162 LAMTOR3Q9UHA4 124 aa12.07□□□□□ -0.48
SRPK1-201ENST00000346162 ZNF503Q96F45 646 aa12.07□□□□□ -0.48
SRPK1-201ENST00000346162 UBL5Q9BZL1 73 aa12.07□□□□□ -0.48
SRPK1-201ENST00000346162 IGKV1OR2-108A0A075B7D4 117 aa12.07□□□□□ -0.48
SRPK1-201ENST00000346162 SDHAF1A6NFY7 115 aa12.07□□□□□ -0.48
SRPK1-201ENST00000346162 BAALC-AS2P0C853 105 aa12.07□□□□□ -0.48
SRPK1-201ENST00000346162 MAPK1IP1LQ8NDC0 245 aa12.07□□□□□ -0.48
SRPK1-201ENST00000346162 IGKV2D-26A0A0A0MRZ7 120 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 IGFBPL1Q8WX77 278 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 RITA1Q96K30 269 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 IGHV3-73A0A0B4J1V6 119 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 RNF223E7ERA6 249 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 TMEM258P61165 79 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 HERVK_113P63121 156 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 NDUFA11Q86Y39 141 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 MUSTN1Q8IVN3 82 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 MBD6Q96DN6 1003 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 A0A0B4J2C4 111 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 PROP1O75360 226 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 IGKV1-17P01599 117 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 WNK1Q9H4A3 2382 aa12.06□□□□□ -0.48
SRPK1-201ENST00000346162 IGKV3D-7A0A0C4DH55 119 aa12.05□□□□□ -0.48
SRPK1-201ENST00000346162 TRAV4A0A0B4J268 109 aa12.05□□□□□ -0.48
SRPK1-201ENST00000346162 TINCRA0A1B0GVN0 87 aa12.05□□□□□ -0.48
SRPK1-201ENST00000346162 TEX49A0A1B0GTD5 131 aa12.05□□□□□ -0.48
SRPK1-201ENST00000346162 HAMPP81172 84 aa12.05□□□□□ -0.48
SRPK1-201ENST00000346162 FAM110AQ9BQ89 295 aa12.05□□□□□ -0.48
SRPK1-201ENST00000346162 C19orf71A6NCJ1 209 aa12.04□□□□□ -0.48
SRPK1-201ENST00000346162 VWC2LB2RUY7 222 aa12.04□□□□□ -0.48
SRPK1-201ENST00000346162 NDUFA4O00483 81 aa12.04□□□□□ -0.48
SRPK1-201ENST00000346162 PKIGQ9Y2B9 76 aa12.04□□□□□ -0.48
SRPK1-201ENST00000346162 H3BT86 120 aa12.04□□□□□ -0.48
SRPK1-201ENST00000346162 P0C879 139 aa12.04□□□□□ -0.48
SRPK1-201ENST00000346162 GP9P14770 177 aa12.04□□□□□ -0.48
SRPK1-201ENST00000346162 LINC00322Q6ZN03 302 aaPredicted RBP12.04□□□□□ -0.48
SRPK1-201ENST00000346162 TRAV12-1A0A0B4J245 112 aa12.03□□□□□ -0.48
SRPK1-201ENST00000346162 NDUFC2O95298 119 aa12.03□□□□□ -0.48
SRPK1-201ENST00000346162 SP5Q6BEB4 398 aaPredicted RBP12.03□□□□□ -0.48
SRPK1-201ENST00000346162 TRGV4A0A0C4DH28 118 aa12.03□□□□□ -0.48
SRPK1-201ENST00000346162 K7EIM0 57 aa12.03□□□□□ -0.48
SRPK1-201ENST00000346162 I3L2K1 104 aa12.03□□□□□ -0.48
SRPK1-201ENST00000346162 RHODO00212 210 aa12.03□□□□□ -0.48
SRPK1-201ENST00000346162 ICOSQ9Y6W8 199 aa12.03□□□□□ -0.48
SRPK1-201ENST00000346162 SONP18583 2426 aaKnown RBP12.03□□□□□ -0.48
SRPK1-201ENST00000346162 HOXB4P17483 251 aaPredicted RBP12.02□□□□□ -0.48
SRPK1-201ENST00000346162 BRWD1-AS2P59051 145 aa12.02□□□□□ -0.48
SRPK1-201ENST00000346162 DEFB131AP59861 70 aa12.02□□□□□ -0.48
SRPK1-201ENST00000346162 IGLV1-47P01700 117 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms