RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 NTF3P20783 257 aa11.86□□□□□ -0.51
CEACAM1-202ENST00000344391 TIMM8BQ9Y5J9 83 aaPredicted RBP11.86□□□□□ -0.51
CEACAM1-202ENST00000344391 IGHV4-4A0A075B6R2 117 aa11.86□□□□□ -0.51
CEACAM1-202ENST00000344391 IGHV3OR16-12A0A075B7B8 117 aa11.86□□□□□ -0.51
CEACAM1-202ENST00000344391 SNURFLB1AK76 121 aa11.86□□□□□ -0.51
CEACAM1-202ENST00000344391 APOC4P55056 127 aa11.86□□□□□ -0.51
CEACAM1-202ENST00000344391 SSTP61278 116 aa11.86□□□□□ -0.51
CEACAM1-202ENST00000344391 CACNG7P62955 275 aa11.86□□□□□ -0.51
CEACAM1-202ENST00000344391 ZNF705AQ6ZN79 300 aaPredicted RBP11.86□□□□□ -0.51
CEACAM1-202ENST00000344391 C9orf85Q96MD7 179 aa11.86□□□□□ -0.51
CEACAM1-202ENST00000344391 A8MZ25 164 aa11.85□□□□□ -0.51
CEACAM1-202ENST00000344391 SPRY2O43597 315 aa11.85□□□□□ -0.51
CEACAM1-202ENST00000344391 MT-ND6P03923 174 aa11.85□□□□□ -0.51
CEACAM1-202ENST00000344391 TRGC2P03986 189 aa11.85□□□□□ -0.51
CEACAM1-202ENST00000344391 RAB4BP61018 213 aa11.85□□□□□ -0.51
CEACAM1-202ENST00000344391 TWIST1Q15672 202 aa11.85□□□□□ -0.51
CEACAM1-202ENST00000344391 GATD1Q8NB37 220 aa11.85□□□□□ -0.51
CEACAM1-202ENST00000344391 MSRB1Q9NZV6 116 aa11.85□□□□□ -0.51
CEACAM1-202ENST00000344391 PHLDA3Q9Y5J5 127 aa11.85□□□□□ -0.51
CEACAM1-202ENST00000344391 TRAPPC1Q9Y5R8 145 aa11.85□□□□□ -0.51
CEACAM1-202ENST00000344391 DNHD1Q96M86 4753 aa11.85□□□□□ -0.51
CEACAM1-202ENST00000344391 S100A8P05109 93 aa11.84□□□□□ -0.51
CEACAM1-202ENST00000344391 SPANXN1Q5VSR9 72 aa11.84□□□□□ -0.51
CEACAM1-202ENST00000344391 PHOX2AO14813 284 aa11.83□□□□□ -0.52
CEACAM1-202ENST00000344391 HLA-DQA1P01909 254 aa11.83□□□□□ -0.52
CEACAM1-202ENST00000344391 AZU1P20160 251 aa11.83□□□□□ -0.52
CEACAM1-202ENST00000344391 FABP9Q0Z7S8 132 aa11.83□□□□□ -0.52
CEACAM1-202ENST00000344391 KPRPQ5T749 579 aaPredicted RBP11.83□□□□□ -0.52
CEACAM1-202ENST00000344391 ZNF493Q6ZR52 646 aa11.83□□□□□ -0.52
CEACAM1-202ENST00000344391 C11orf72Q8NBR9 251 aa11.83□□□□□ -0.52
CEACAM1-202ENST00000344391 MRPL18Q9H0U6 180 aaKnown RBP11.83□□□□□ -0.52
CEACAM1-202ENST00000344391 NBEAL2Q6ZNJ1 2754 aa11.83□□□□□ -0.52
CEACAM1-202ENST00000344391 NXPH4O95158 308 aa11.82□□□□□ -0.52
CEACAM1-202ENST00000344391 FRZBQ92765 325 aa11.82□□□□□ -0.52
CEACAM1-202ENST00000344391 M0R381 172 aa11.82□□□□□ -0.52
CEACAM1-202ENST00000344391 UBE2CO00762 179 aa11.82□□□□□ -0.52
CEACAM1-202ENST00000344391 ZNF415Q09FC8 603 aa11.82□□□□□ -0.52
CEACAM1-202ENST00000344391 DMRTA1Q5VZB9 504 aa11.82□□□□□ -0.52
CEACAM1-202ENST00000344391 C1orf196B1AJZ1 125 aa11.81□□□□□ -0.52
CEACAM1-202ENST00000344391 ZFP82Q8N141 532 aa11.81□□□□□ -0.52
CEACAM1-202ENST00000344391 RNASE8Q8TDE3 154 aaKnown RBP11.81□□□□□ -0.52
CEACAM1-202ENST00000344391 TMEM191AQ9H0A3 160 aa11.81□□□□□ -0.52
CEACAM1-202ENST00000344391 GSN-AS1Q9NRJ2 163 aa11.81□□□□□ -0.52
CEACAM1-202ENST00000344391 SLAQ13239 276 aa11.8□□□□□ -0.52
CEACAM1-202ENST00000344391 TMEM263Q8WUH6 116 aaKnown RBP11.8□□□□□ -0.52
CEACAM1-202ENST00000344391 APCSP02743 223 aa11.79□□□□□ -0.52
CEACAM1-202ENST00000344391 RRN3P1Q2M238 152 aa11.79□□□□□ -0.52
CEACAM1-202ENST00000344391 RCHY1Q96PM5 261 aa11.79□□□□□ -0.52
CEACAM1-202ENST00000344391 SPXQ9BT56 116 aa11.79□□□□□ -0.52
CEACAM1-202ENST00000344391 DEFB135Q30KP9 77 aa11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 SYT8Q8NBV8 401 aa11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 IL17DQ8TAD2 202 aa11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 TMA7Q9Y2S6 64 aaKnown RBP11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 X6R8D5 127 aa11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 M0R2P5 195 aa11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 TRGC1P0CF51 173 aa11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 EVI2AP22794 236 aa11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 RAB5BP61020 215 aa11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 FAM104BQ5XKR9 115 aa11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 Q6ZWC4 215 aa11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 PTH2Q96A98 100 aa11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 C16orf74Q96GX8 76 aa11.78□□□□□ -0.52
CEACAM1-202ENST00000344391 PLAC8L1A1L4L8 177 aa11.77□□□□□ -0.53
CEACAM1-202ENST00000344391 KIAA1644Q3SXP7 199 aa11.77□□□□□ -0.53
CEACAM1-202ENST00000344391 ZNF876PQ49A33 203 aa11.77□□□□□ -0.53
CEACAM1-202ENST00000344391 SMIM15Q7Z3B0 74 aa11.77□□□□□ -0.53
CEACAM1-202ENST00000344391 AMN1Q8IY45 258 aa11.77□□□□□ -0.53
CEACAM1-202ENST00000344391 SMIM9A6NGZ8 99 aa11.76□□□□□ -0.53
CEACAM1-202ENST00000344391 PRB2P02812 416 aaPredicted RBP11.76□□□□□ -0.53
CEACAM1-202ENST00000344391 RNF183Q96D59 192 aa11.76□□□□□ -0.53
CEACAM1-202ENST00000344391 AP1S3Q96PC3 154 aa11.76□□□□□ -0.53
CEACAM1-202ENST00000344391 K7EIL1 84 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 HIST1H2BKO60814 126 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 HIST1H2BJP06899 126 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 HIST1H2BOP23527 126 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 HIST1H2BBP33778 126 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 HIST1H2BDP58876 126 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 HIST1H2BCP62807 126 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 HIST2H2BEQ16778 126 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 PIK3CD-AS1Q5SR53 167 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 C14orf178Q8N769 122 aaPredicted RBP11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 HIST1H2BHQ93079 126 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 RNF185Q96GF1 192 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 HIST1H2BNQ99877 126 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 HIST1H2BMQ99879 126 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 JPT2Q9H910 190 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 RAB4AP20338 218 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 DAZ2Q13117 558 aaKnown RBP11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 DPH3P1Q9H4G8 78 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 KIF25-AS1Q9Y6Z4 181 aa11.75□□□□□ -0.53
CEACAM1-202ENST00000344391 MRPL51Q4U2R6 128 aaKnown RBP11.74□□□□□ -0.53
CEACAM1-202ENST00000344391 OR11H2Q8NH07 326 aa11.74□□□□□ -0.53
CEACAM1-202ENST00000344391 RASL10AQ92737 203 aa11.74□□□□□ -0.53
CEACAM1-202ENST00000344391 OVOL2Q9BRP0 275 aa11.73□□□□□ -0.53
CEACAM1-202ENST00000344391 MRPL16Q9NX20 251 aaKnown RBP11.73□□□□□ -0.53
CEACAM1-202ENST00000344391 SRIP30626 198 aa11.72□□□□□ -0.53
CEACAM1-202ENST00000344391 LINC00315P59091 139 aa11.72□□□□□ -0.53
CEACAM1-202ENST00000344391 LGALS9BQ3B8N2 356 aa11.72□□□□□ -0.53
CEACAM1-202ENST00000344391 ALKBH7Q9BT30 221 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms