RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 SNAI2O43623 268 aa9.93□□□□□ -0.82
HERPUD1-202ENST00000344114 RNASE4P34096 147 aaKnown RBP9.93□□□□□ -0.82
HERPUD1-202ENST00000344114 DEFB131AP59861 70 aa9.93□□□□□ -0.82
HERPUD1-202ENST00000344114 OR2K2Q8NGT1 345 aa9.93□□□□□ -0.82
HERPUD1-202ENST00000344114 MAP6D1Q9H9H5 199 aa9.93□□□□□ -0.82
HERPUD1-202ENST00000344114 LOC102724200A0A096LPH7 203 aaPredicted RBP9.92□□□□□ -0.82
HERPUD1-202ENST00000344114 IFITM10A6NMD0 228 aa9.92□□□□□ -0.82
HERPUD1-202ENST00000344114 OR5AL1P0C617 328 aa9.92□□□□□ -0.82
HERPUD1-202ENST00000344114 ESDP10768 282 aa9.92□□□□□ -0.82
HERPUD1-202ENST00000344114 HLA-DRB4P13762 266 aa9.92□□□□□ -0.82
HERPUD1-202ENST00000344114 CDKN1BP46527 198 aa9.92□□□□□ -0.82
HERPUD1-202ENST00000344114 CACNG7P62955 275 aa9.92□□□□□ -0.82
HERPUD1-202ENST00000344114 PDZD11Q5EBL8 140 aa9.92□□□□□ -0.82
HERPUD1-202ENST00000344114 DNLZQ5SXM8 178 aa9.92□□□□□ -0.82
HERPUD1-202ENST00000344114 ALKBH7Q9BT30 221 aaPredicted RBP9.92□□□□□ -0.82
HERPUD1-202ENST00000344114 HLA-DRB4X5D2U9 266 aa9.92□□□□□ -0.82
HERPUD1-202ENST00000344114 SAP30O75446 220 aa9.91□□□□□ -0.82
HERPUD1-202ENST00000344114 ASIPP42127 132 aa9.91□□□□□ -0.82
HERPUD1-202ENST00000344114 BAGE3Q86Y29 109 aa9.91□□□□□ -0.82
HERPUD1-202ENST00000344114 C18orf32Q8TCD1 76 aa9.91□□□□□ -0.82
HERPUD1-202ENST00000344114 TMEM18Q96B42 140 aa9.91□□□□□ -0.82
HERPUD1-202ENST00000344114 KCNS1Q96KK3 526 aa9.91□□□□□ -0.82
HERPUD1-202ENST00000344114 NAGKQ9UJ70 344 aa9.91□□□□□ -0.82
HERPUD1-202ENST00000344114 TP53TG3Q9ULZ0 132 aa9.91□□□□□ -0.82
HERPUD1-202ENST00000344114 A8MZ25 164 aa9.9□□□□□ -0.82
HERPUD1-202ENST00000344114 SMIM6P0DI80 62 aa9.9□□□□□ -0.82
HERPUD1-202ENST00000344114 FABP4P15090 132 aa9.9□□□□□ -0.82
HERPUD1-202ENST00000344114 NTF3P20783 257 aa9.9□□□□□ -0.82
HERPUD1-202ENST00000344114 TWIST1Q15672 202 aa9.9□□□□□ -0.82
HERPUD1-202ENST00000344114 ANXA2RQ3ZCQ2 193 aa9.9□□□□□ -0.82
HERPUD1-202ENST00000344114 AMTNQ6UX39 209 aa9.9□□□□□ -0.82
HERPUD1-202ENST00000344114 HIST1H2BLQ99880 126 aa9.9□□□□□ -0.82
HERPUD1-202ENST00000344114 TMEM191AQ9H0A3 160 aa9.9□□□□□ -0.82
HERPUD1-202ENST00000344114 IGHV4-4A0A075B6R2 117 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 H3BMM0 161 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 H3BVH4 76 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 SERF1AO75920 110 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 AMBPP02760 352 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 CMC4P56277 68 aaPredicted RBP9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 KIR3DS1Q14943 382 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 DMRTA1Q5VZB9 504 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 FAM104BQ5XKR9 115 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 FAM159AQ6UWV7 190 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 Q6ZQT7 251 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 TMEM256Q8N2U0 113 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 CLUHP3Q96NS8 147 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 C19orf73Q9NVV2 129 aa9.89□□□□□ -0.83
HERPUD1-202ENST00000344114 KNCNA6PVL3 124 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 IGKV3-20P01619 116 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 IGLV1-51P01701 117 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 IGHV4-30-4P0DP06 118 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 S100A4P26447 101 aaKnown RBP9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 LINC00310P59036 64 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 TDRG1Q3Y452 100 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 LINC00518Q8N0U6 118 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 Q8N1Y9 231 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 PACRGQ96M98 296 aaPredicted RBP9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 M0R2Z0 102 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 ZNF324O75467 553 aaPredicted RBP9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 SPINK13Q1W4C9 94 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 ODF3L2Q3SX64 289 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 MUC21Q5SSG8 566 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 SMIM15Q7Z3B0 74 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 OR10D4PQ8NGN7 298 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 OR10AG1Q8NH19 301 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 FAM110AQ9BQ89 295 aa9.88□□□□□ -0.83
HERPUD1-202ENST00000344114 NACAE9PAV3 2078 aa9.87□□□□□ -0.83
HERPUD1-202ENST00000344114 PLECQ15149 4684 aaKnown RBP9.87□□□□□ -0.83
HERPUD1-202ENST00000344114 TRAV12-3A0A0B4J271 114 aa9.87□□□□□ -0.83
HERPUD1-202ENST00000344114 MUC21A0A0G2JKD1 596 aa9.87□□□□□ -0.83
HERPUD1-202ENST00000344114 MUC21A0A140T8X8 626 aa9.87□□□□□ -0.83
HERPUD1-202ENST00000344114 OR11H12B2RN74 326 aa9.87□□□□□ -0.83
HERPUD1-202ENST00000344114 SPANXN1Q5VSR9 72 aa9.87□□□□□ -0.83
HERPUD1-202ENST00000344114 SPATA25Q9BR10 227 aa9.87□□□□□ -0.83
HERPUD1-202ENST00000344114 SCRT2Q9NQ03 307 aa9.87□□□□□ -0.83
HERPUD1-202ENST00000344114 IQCJQ1A5X6 159 aa9.86□□□□□ -0.83
HERPUD1-202ENST00000344114 MRPL51Q4U2R6 128 aaKnown RBP9.86□□□□□ -0.83
HERPUD1-202ENST00000344114 AMN1Q8IY45 258 aa9.86□□□□□ -0.83
HERPUD1-202ENST00000344114 C20orf144Q9BQM9 153 aa9.86□□□□□ -0.83
HERPUD1-202ENST00000344114 TRAV12-2A0A075B6T6 113 aa9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 IGHV1OR15-1A0A075B7D0 117 aa9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 NUPR1O60356 82 aa9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 NXPH4O95158 308 aa9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 PPBPP02775 128 aa9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 RNASE3P12724 160 aaKnown RBP9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 SSTP61278 116 aa9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 LCE2DQ5TA82 110 aaPredicted RBP9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 ORMDL3Q8N138 153 aa9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 C12orf57Q99622 126 aa9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 SAMD10Q9BYL1 202 aa9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 MSRB1Q9NZV6 116 aa9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 PHLDA3Q9Y5J5 127 aa9.85□□□□□ -0.83
HERPUD1-202ENST00000344114 TRGV11A0A075B6L2 103 aa9.84□□□□□ -0.83
HERPUD1-202ENST00000344114 RBMY1BA6NDE4 496 aaKnown RBP9.84□□□□□ -0.83
HERPUD1-202ENST00000344114 RBMY1EA6NEQ0 496 aaKnown RBP9.84□□□□□ -0.83
HERPUD1-202ENST00000344114 GNRH2O43555 120 aa9.84□□□□□ -0.83
HERPUD1-202ENST00000344114 CD7P09564 240 aa9.84□□□□□ -0.83
HERPUD1-202ENST00000344114 RBMY1DP0C7P1 496 aaKnown RBP9.84□□□□□ -0.83
HERPUD1-202ENST00000344114 ZNF124Q15973 351 aa9.84□□□□□ -0.83
HERPUD1-202ENST00000344114 STHQ8IWL8 128 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms