RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 FGF6P10767 208 aa11.29□□□□□ -0.6
TPM3-208ENST00000341485 Q6ZSV7 163 aa11.29□□□□□ -0.6
TPM3-208ENST00000341485 SMPXQ9UHP9 88 aa11.29□□□□□ -0.6
TPM3-208ENST00000341485 DKK2Q9UBU2 259 aa11.29□□□□□ -0.6
TPM3-208ENST00000341485 PRSS47A8MTI9 375 aa11.28□□□□□ -0.6
TPM3-208ENST00000341485 SPRY2O43597 315 aa11.28□□□□□ -0.6
TPM3-208ENST00000341485 KIR3DS1Q14943 382 aa11.28□□□□□ -0.6
TPM3-208ENST00000341485 OR1N2Q8NGR9 330 aa11.28□□□□□ -0.6
TPM3-208ENST00000341485 TMEM158Q8WZ71 300 aa11.28□□□□□ -0.6
TPM3-208ENST00000341485 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
TPM3-208ENST00000341485 ANXA2RQ3ZCQ2 193 aa11.28□□□□□ -0.6
TPM3-208ENST00000341485 APRG1Q8IVJ8 170 aa11.28□□□□□ -0.6
TPM3-208ENST00000341485 K7EMT4 169 aa11.27□□□□□ -0.61
TPM3-208ENST00000341485 RNASE1P07998 156 aaKnown RBP11.27□□□□□ -0.61
TPM3-208ENST00000341485 C12orf54Q6X4T0 127 aa11.27□□□□□ -0.61
TPM3-208ENST00000341485 DEFB125Q8N687 156 aa11.27□□□□□ -0.61
TPM3-208ENST00000341485 UBE2E2Q96LR5 201 aa11.27□□□□□ -0.61
TPM3-208ENST00000341485 LGALS1P09382 135 aaKnown RBP11.26□□□□□ -0.61
TPM3-208ENST00000341485 ASIPP42127 132 aa11.26□□□□□ -0.61
TPM3-208ENST00000341485 TCTAP57738 103 aa11.26□□□□□ -0.61
TPM3-208ENST00000341485 RNF152Q8N8N0 203 aa11.26□□□□□ -0.61
TPM3-208ENST00000341485 MYOZ3Q8TDC0 251 aa11.26□□□□□ -0.61
TPM3-208ENST00000341485 ODF1Q14990 250 aa11.26□□□□□ -0.61
TPM3-208ENST00000341485 MRAP2Q96G30 205 aa11.26□□□□□ -0.61
TPM3-208ENST00000341485 TLN2Q9Y4G6 2542 aa11.25□□□□□ -0.61
TPM3-208ENST00000341485 TRBV7-9A0A0J9YWB2 115 aa11.25□□□□□ -0.61
TPM3-208ENST00000341485 M0R381 172 aa11.25□□□□□ -0.61
TPM3-208ENST00000341485 S100A4P26447 101 aaKnown RBP11.25□□□□□ -0.61
TPM3-208ENST00000341485 HILS1P60008 231 aa11.25□□□□□ -0.61
TPM3-208ENST00000341485 KHDC1LQ5JSQ8 128 aa11.25□□□□□ -0.61
TPM3-208ENST00000341485 TAX1BP3O14907 124 aa11.24□□□□□ -0.61
TPM3-208ENST00000341485 GNRH2O43555 120 aa11.24□□□□□ -0.61
TPM3-208ENST00000341485 BOD1L2Q8IYS8 172 aa11.24□□□□□ -0.61
TPM3-208ENST00000341485 DCANP1Q8TF63 244 aa11.24□□□□□ -0.61
TPM3-208ENST00000341485 JMJD8Q96S16 334 aa11.24□□□□□ -0.61
TPM3-208ENST00000341485 ZMAT4Q9H898 229 aa11.24□□□□□ -0.61
TPM3-208ENST00000341485 SONP18583 2426 aaKnown RBP11.24□□□□□ -0.61
TPM3-208ENST00000341485 SMIM17P0DL12 118 aa11.24□□□□□ -0.61
TPM3-208ENST00000341485 MED14OSP0DP75 135 aa11.24□□□□□ -0.61
TPM3-208ENST00000341485 FOSL1P15407 271 aa11.24□□□□□ -0.61
TPM3-208ENST00000341485 LAGE3Q14657 143 aa11.24□□□□□ -0.61
TPM3-208ENST00000341485 MYO9AB2RTY4 2548 aa11.24□□□□□ -0.61
TPM3-208ENST00000341485 ACANP16112 2415 aa11.23□□□□□ -0.61
TPM3-208ENST00000341485 ANK3Q12955 4377 aaKnown RBP11.23□□□□□ -0.61
TPM3-208ENST00000341485 IGHV4OR15-8A0A075B7B6 117 aa11.23□□□□□ -0.61
TPM3-208ENST00000341485 A0A087WW49 117 aa11.23□□□□□ -0.61
TPM3-208ENST00000341485 INAFM1C9JVW0 142 aa11.23□□□□□ -0.61
TPM3-208ENST00000341485 CCL25O15444 150 aa11.23□□□□□ -0.61
TPM3-208ENST00000341485 PRSS1P07477 247 aa11.23□□□□□ -0.61
TPM3-208ENST00000341485 RNASE3P12724 160 aaKnown RBP11.23□□□□□ -0.61
TPM3-208ENST00000341485 ID1P41134 155 aa11.23□□□□□ -0.61
TPM3-208ENST00000341485 PHLDA3Q9Y5J5 127 aa11.23□□□□□ -0.61
TPM3-208ENST00000341485 KLLNB2CW77 178 aa11.22□□□□□ -0.61
TPM3-208ENST00000341485 C14orf178Q8N769 122 aaPredicted RBP11.22□□□□□ -0.61
TPM3-208ENST00000341485 RASL10AQ92737 203 aa11.22□□□□□ -0.61
TPM3-208ENST00000341485 SMIM2Q9BVW6 85 aa11.22□□□□□ -0.61
TPM3-208ENST00000341485 DPH3P1Q9H4G8 78 aa11.22□□□□□ -0.61
TPM3-208ENST00000341485 PCP2Q8IVA1 136 aa11.21□□□□□ -0.61
TPM3-208ENST00000341485 MXRA5Q9NR99 2828 aa11.21□□□□□ -0.62
TPM3-208ENST00000341485 ATP5LO75964 103 aa11.21□□□□□ -0.62
TPM3-208ENST00000341485 NMUP48645 174 aa11.21□□□□□ -0.62
TPM3-208ENST00000341485 PTTG1IPP53801 180 aa11.21□□□□□ -0.62
TPM3-208ENST00000341485 UBE2V1Q13404 147 aa11.21□□□□□ -0.62
TPM3-208ENST00000341485 TMEM97Q5BJF2 176 aa11.21□□□□□ -0.62
TPM3-208ENST00000341485 ERASQ7Z444 233 aa11.21□□□□□ -0.62
TPM3-208ENST00000341485 C16orf95Q9H693 158 aa11.21□□□□□ -0.62
TPM3-208ENST00000341485 HHLA3Q9XRX5 114 aa11.21□□□□□ -0.62
TPM3-208ENST00000341485 SAMD13Q5VXD3 122 aa11.2□□□□□ -0.62
TPM3-208ENST00000341485 C18orf65Q6ZTR6 163 aa11.2□□□□□ -0.62
TPM3-208ENST00000341485 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
TPM3-208ENST00000341485 RPL39LQ96EH5 51 aaKnown RBP11.2□□□□□ -0.62
TPM3-208ENST00000341485 IGKCP01834 107 aa11.2□□□□□ -0.62
TPM3-208ENST00000341485 HOXD3P31249 432 aaPredicted RBP11.2□□□□□ -0.62
TPM3-208ENST00000341485 TCTEX1D4Q5JR98 221 aa11.2□□□□□ -0.62
TPM3-208ENST00000341485 OR9G4Q8NGQ1 327 aa11.2□□□□□ -0.62
TPM3-208ENST00000341485 C4orf3Q8WVX3 66 aa11.2□□□□□ -0.62
TPM3-208ENST00000341485 MUC4Q99102 2169 aa11.19□□□□□ -0.62
TPM3-208ENST00000341485 NXPH4O95158 308 aa11.19□□□□□ -0.62
TPM3-208ENST00000341485 MGPP08493 103 aa11.19□□□□□ -0.62
TPM3-208ENST00000341485 SYNJ2BPP57105 145 aa11.19□□□□□ -0.62
TPM3-208ENST00000341485 KLHL30-AS1Q8NEE0 82 aa11.19□□□□□ -0.62
TPM3-208ENST00000341485 LINC01006Q8NI28 216 aa11.19□□□□□ -0.62
TPM3-208ENST00000341485 IGKV2D-26A0A0A0MRZ7 120 aa11.18□□□□□ -0.62
TPM3-208ENST00000341485 C7orf71A4D174 169 aa11.18□□□□□ -0.62
TPM3-208ENST00000341485 CBY3A6NI87 242 aa11.18□□□□□ -0.62
TPM3-208ENST00000341485 SIVA1O15304 175 aa11.18□□□□□ -0.62
TPM3-208ENST00000341485 DPM2O94777 84 aa11.18□□□□□ -0.62
TPM3-208ENST00000341485 ZNF688P0C7X2 276 aa11.18□□□□□ -0.62
TPM3-208ENST00000341485 SUMO2P61956 95 aaKnown RBP11.18□□□□□ -0.62
TPM3-208ENST00000341485 DEFB136Q30KP8 78 aa11.18□□□□□ -0.62
TPM3-208ENST00000341485 C20orf78Q9BR46 151 aa11.18□□□□□ -0.62
TPM3-208ENST00000341485 HIVEP2P31629 2446 aa11.18□□□□□ -0.62
TPM3-208ENST00000341485 LINC01619G3V211 115 aa11.18□□□□□ -0.62
TPM3-208ENST00000341485 OR11H1Q8NG94 326 aa11.18□□□□□ -0.62
TPM3-208ENST00000341485 AP1S3Q96PC3 154 aa11.18□□□□□ -0.62
TPM3-208ENST00000341485 LGALS9O00182 355 aa11.17□□□□□ -0.62
TPM3-208ENST00000341485 SEC11AP67812 179 aa11.17□□□□□ -0.62
TPM3-208ENST00000341485 VAMP3Q15836 100 aa11.17□□□□□ -0.62
TPM3-208ENST00000341485 PSMG4Q5JS54 123 aa11.17□□□□□ -0.62
TPM3-208ENST00000341485 ADAMTSL5Q6ZMM2 481 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms