RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 PPP1R17O96001 155 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 COX6CP09669 75 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 LMO4P61968 165 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 DYNLRB2Q8TF09 96 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 IGF2BP2-AS1Q96M15 143 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 KLK9Q9UKQ9 250 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 IGKV1-17P01599 117 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 CDKN1BP46527 198 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 DUX3Q96PT4 197 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 VCX2Q9H322 139 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 P0C879 139 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 KRTAP10-9P60411 292 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 TEX29Q8N6K0 151 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 ZNF491Q8N8L2 437 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 IGHV3-38A0A0C4DH36 116 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 ATP6V0E1O15342 81 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 DSCR9P59020 149 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 Q8N7P7 452 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 DDB2Q92466 427 aa8.14□□□□□ -1.11
CAPRIN1-201ENST00000341394 A8MWV9 139 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 K7EP34 96 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 GNRH2O43555 120 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 RAB9AP51151 201 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 RASL11AQ6T310 242 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 RPL39LQ96EH5 51 aaKnown RBP8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 GAGE12HA6NDE8 117 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 VWC2LB2RUY7 222 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 PAX8Q06710 450 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 SIGLEC15Q6ZMC9 328 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 LY6G5BQ8NDX9 201 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 TRBV25-1A0A075B6N4 114 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 RNF223E7ERA6 249 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 RBX1P62877 108 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 C2orf66Q6UXQ4 117 aa8.13□□□□□ -1.11
CAPRIN1-201ENST00000341394 TRAV8-3A0A0A6YYJ7 113 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 H3BRM9 83 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 GAS8-AS1O95177 125 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 IGLV1-47P01700 117 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 PRADC1Q9BSG0 188 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 AKAP9Q99996 3911 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 ID1P41134 155 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 SYNJ2BPP57105 145 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 CFHR4Q92496 578 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 TNFRSF18Q9Y5U5 241 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 SCGB1A1P11684 91 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 FAM231DQ6ZW35 169 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 C8orf31Q8N9H6 132 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 TP53TG1Q9Y2A0 90 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 HECTD1Q9ULT8 2610 aa8.12□□□□□ -1.11
CAPRIN1-201ENST00000341394 SAA4P35542 130 aa8.11□□□□□ -1.11
CAPRIN1-201ENST00000341394 HIST2H2BDQ6DRA6 164 aa8.11□□□□□ -1.11
CAPRIN1-201ENST00000341394 B4DSR2 109 aa8.11□□□□□ -1.11
CAPRIN1-201ENST00000341394 SCRT2Q9NQ03 307 aa8.11□□□□□ -1.11
CAPRIN1-201ENST00000341394 H3BUX3 64 aa8.11□□□□□ -1.11
CAPRIN1-201ENST00000341394 MSMBP08118 114 aa8.11□□□□□ -1.11
CAPRIN1-201ENST00000341394 CD28P10747 220 aa8.11□□□□□ -1.11
CAPRIN1-201ENST00000341394 A0A1B0GW15 77 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 PPBPP02775 128 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 SPINK13Q1W4C9 94 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 UBE2E2Q96LR5 201 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 GP9P14770 177 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 OR11H6Q8NGC7 330 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 GAGE2BQ13066 116 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 DEFB113Q30KQ7 82 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 GAGE2EQ4V326 116 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 GAGE2DQ9UEU5 116 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 ERG28Q9UKR5 140 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 H7C1H1 209 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 HOXB4P17483 251 aaPredicted RBP8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 C10orf126Q8N4M7 172 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 AGPAT4-IT1Q9H0P7 198 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 SS18L2Q9UHA2 77 aa8.1□□□□□ -1.11
CAPRIN1-201ENST00000341394 IGKV2D-26A0A0A0MRZ7 120 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 TRAV13-1A0A0B4J241 112 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 TRAV21A0A0B4J279 112 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 TMEM262E9PQX1 116 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 UBE2E1P51965 193 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 C12orf74Q32Q52 190 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 C19orf54Q5BKX5 351 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 DLX4Q92988 240 aaPredicted RBP8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 C1orf159Q96HA4 380 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 Q96MF0 132 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 LINC01587Q99440 93 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 IGKV1D-37A0A075B6S9 117 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 NPFFO15130 113 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 ZNF80P51504 273 aaPredicted RBP8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 MBD6Q96DN6 1003 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 SIRPDQ9H106 197 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 JPT2Q9H910 190 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 ZNF492Q9P255 531 aa8.09□□□□□ -1.11
CAPRIN1-201ENST00000341394 B5MCH6 92 aa8.09□□□□□ -1.12
CAPRIN1-201ENST00000341394 MINOS1Q5TGZ0 78 aa8.09□□□□□ -1.12
CAPRIN1-201ENST00000341394 MINOS1-NBL1R4GNA1 71 aa8.09□□□□□ -1.12
CAPRIN1-201ENST00000341394 CTRLP40313 264 aa8.08□□□□□ -1.12
CAPRIN1-201ENST00000341394 RPL39P62891 51 aaKnown RBP8.08□□□□□ -1.12
CAPRIN1-201ENST00000341394 Q6ZQT7 251 aa8.08□□□□□ -1.12
CAPRIN1-201ENST00000341394 OPRPNQ99935 248 aaPredicted RBP8.08□□□□□ -1.12
CAPRIN1-201ENST00000341394 PDZD2O15018 2839 aa8.08□□□□□ -1.12
CAPRIN1-201ENST00000341394 DAND5Q8N907 189 aa8.08□□□□□ -1.12
CAPRIN1-201ENST00000341394 C20orf78Q9BR46 151 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms