RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 TWIST1Q15672 202 aa12.98□□□□□ -0.33
CDK11B-201ENST00000340677 DUTP33316 252 aaKnown RBP12.98□□□□□ -0.33
CDK11B-201ENST00000340677 CIRBPQ14011 172 aaKnown RBP12.98□□□□□ -0.33
CDK11B-201ENST00000340677 KHDC1LQ5JSQ8 128 aa12.98□□□□□ -0.33
CDK11B-201ENST00000340677 MIR17HGQ75NE6 70 aa12.98□□□□□ -0.33
CDK11B-201ENST00000340677 PRSS46E5RG02 174 aa12.97□□□□□ -0.33
CDK11B-201ENST00000340677 IGLV2-14P01704 120 aa12.97□□□□□ -0.33
CDK11B-201ENST00000340677 GRPP07492 148 aa12.97□□□□□ -0.33
CDK11B-201ENST00000340677 RPL18AQ02543 176 aaKnown RBP12.97□□□□□ -0.33
CDK11B-201ENST00000340677 BSPH1Q075Z2 132 aa12.97□□□□□ -0.33
CDK11B-201ENST00000340677 AMMECR1Q9Y4X0 333 aaPredicted RBP12.97□□□□□ -0.33
CDK11B-201ENST00000340677 PCNX1Q96RV3 2341 aa12.96□□□□□ -0.33
CDK11B-201ENST00000340677 CADP27708 2225 aa12.96□□□□□ -0.33
CDK11B-201ENST00000340677 GRNP28799 593 aaKnown RBP12.96□□□□□ -0.33
CDK11B-201ENST00000340677 MRPL55Q7Z7F7 128 aaKnown RBP12.96□□□□□ -0.33
CDK11B-201ENST00000340677 FASNP49327 2511 aaKnown RBP12.96□□□□□ -0.33
CDK11B-201ENST00000340677 BOD1L1Q8NFC6 3051 aa12.96□□□□□ -0.33
CDK11B-201ENST00000340677 TRAV40A0A0B4J280 105 aa12.96□□□□□ -0.34
CDK11B-201ENST00000340677 PRSS1P07477 247 aa12.96□□□□□ -0.34
CDK11B-201ENST00000340677 DLX1P56177 255 aa12.96□□□□□ -0.34
CDK11B-201ENST00000340677 U3KQE9 123 aa12.96□□□□□ -0.34
CDK11B-201ENST00000340677 PAX4O43316 350 aa12.95□□□□□ -0.34
CDK11B-201ENST00000340677 C2orf82Q6UX34 121 aa12.95□□□□□ -0.34
CDK11B-201ENST00000340677 SYNJ2BPP57105 145 aa12.95□□□□□ -0.34
CDK11B-201ENST00000340677 ATXN8Q156A1 80 aa12.95□□□□□ -0.34
CDK11B-201ENST00000340677 SPTA1P02549 2419 aa12.95□□□□□ -0.34
CDK11B-201ENST00000340677 ACYP1P07311 99 aa12.94□□□□□ -0.34
CDK11B-201ENST00000340677 CFC1BP0CG36 223 aa12.94□□□□□ -0.34
CDK11B-201ENST00000340677 CFC1P0CG37 223 aa12.94□□□□□ -0.34
CDK11B-201ENST00000340677 FOXC2Q99958 501 aa12.94□□□□□ -0.34
CDK11B-201ENST00000340677 TRBV7-1A0A0A6YYK4 115 aa12.94□□□□□ -0.34
CDK11B-201ENST00000340677 SRRM5B3KS81 715 aa12.94□□□□□ -0.34
CDK11B-201ENST00000340677 LOXP28300 417 aaPredicted RBP12.94□□□□□ -0.34
CDK11B-201ENST00000340677 SPINK9Q5DT21 86 aa12.94□□□□□ -0.34
CDK11B-201ENST00000340677 Q6ZRU5 148 aa12.94□□□□□ -0.34
CDK11B-201ENST00000340677 DAZ2Q13117 558 aaKnown RBP12.93□□□□□ -0.34
CDK11B-201ENST00000340677 DAZ4Q86SG3 579 aaKnown RBP12.93□□□□□ -0.34
CDK11B-201ENST00000340677 GFRA4Q9GZZ7 299 aa12.93□□□□□ -0.34
CDK11B-201ENST00000340677 DAZ1Q9NQZ3 744 aaKnown RBP12.93□□□□□ -0.34
CDK11B-201ENST00000340677 DAZ3Q9NR90 486 aaKnown RBP12.93□□□□□ -0.34
CDK11B-201ENST00000340677 SPENQ96T58 3664 aaKnown RBP12.93□□□□□ -0.34
CDK11B-201ENST00000340677 LAMA5O15230 3695 aa12.93□□□□□ -0.34
CDK11B-201ENST00000340677 IGHV3-64DA0A0J9YX35 117 aa12.93□□□□□ -0.34
CDK11B-201ENST00000340677 LINC00322Q6ZN03 302 aaPredicted RBP12.93□□□□□ -0.34
CDK11B-201ENST00000340677 SRSF12Q8WXF0 261 aaKnown RBP12.93□□□□□ -0.34
CDK11B-201ENST00000340677 RAI1Q7Z5J4 1906 aaPredicted RBP12.92□□□□□ -0.34
CDK11B-201ENST00000340677 UBE2E1P51965 193 aa12.92□□□□□ -0.34
CDK11B-201ENST00000340677 FAM53AQ6NSI3 398 aaPredicted RBP12.92□□□□□ -0.34
CDK11B-201ENST00000340677 UBE2E2Q96LR5 201 aa12.92□□□□□ -0.34
CDK11B-201ENST00000340677 ZFYVE26Q68DK2 2539 aa12.92□□□□□ -0.34
CDK11B-201ENST00000340677 PLCE1Q9P212 2302 aa12.92□□□□□ -0.34
CDK11B-201ENST00000340677 LHBP01229 141 aa12.92□□□□□ -0.34
CDK11B-201ENST00000340677 IGHV1-46P01743 117 aa12.92□□□□□ -0.34
CDK11B-201ENST00000340677 FAM104BQ5XKR9 115 aa12.92□□□□□ -0.34
CDK11B-201ENST00000340677 ZNF497Q6ZNH5 498 aa12.92□□□□□ -0.34
CDK11B-201ENST00000340677 ZNF826PQ6ZT77 177 aa12.92□□□□□ -0.34
CDK11B-201ENST00000340677 FAM223AQ8IWN6 122 aa12.92□□□□□ -0.34
CDK11B-201ENST00000340677 C1orf159Q96HA4 380 aa12.92□□□□□ -0.34
CDK11B-201ENST00000340677 BBC3Q96PG8 261 aaPredicted RBP12.92□□□□□ -0.34
CDK11B-201ENST00000340677 PRO1854Q9UHT4 67 aa12.92□□□□□ -0.34
CDK11B-201ENST00000340677 UPK2O00526 184 aa12.91□□□□□ -0.34
CDK11B-201ENST00000340677 IGHV4-39P01824 125 aa12.91□□□□□ -0.34
CDK11B-201ENST00000340677 ORMDL2Q53FV1 153 aa12.91□□□□□ -0.34
CDK11B-201ENST00000340677 EEF1AKMT3Q96AZ1 226 aa12.91□□□□□ -0.34
CDK11B-201ENST00000340677 Q8N8P6 123 aa12.91□□□□□ -0.34
CDK11B-201ENST00000340677 ZNF714Q96N38 554 aa12.91□□□□□ -0.34
CDK11B-201ENST00000340677 TMEM243Q9BU79 118 aa12.91□□□□□ -0.34
CDK11B-201ENST00000340677 LINC00474Q9P2X8 69 aa12.91□□□□□ -0.34
CDK11B-201ENST00000340677 ITLN1Q8WWA0 313 aa12.9□□□□□ -0.34
CDK11B-201ENST00000340677 ERCC8Q13216 396 aa12.9□□□□□ -0.34
CDK11B-201ENST00000340677 MRPL35Q9NZE8 188 aaKnown RBP12.9□□□□□ -0.34
CDK11B-201ENST00000340677 ZNF492Q9P255 531 aa12.9□□□□□ -0.34
CDK11B-201ENST00000340677 SRRM4A7MD48 611 aaKnown RBP12.89□□□□□ -0.35
CDK11B-201ENST00000340677 C17orf100A8MU93 164 aa12.89□□□□□ -0.35
CDK11B-201ENST00000340677 D6R8Y8 96 aa12.89□□□□□ -0.35
CDK11B-201ENST00000340677 PRR15Q8IV56 129 aa12.89□□□□□ -0.35
CDK11B-201ENST00000340677 SPRY2O43597 315 aa12.89□□□□□ -0.35
CDK11B-201ENST00000340677 SNRPD3P62318 126 aaKnown RBP12.89□□□□□ -0.35
CDK11B-201ENST00000340677 E7EQL1 145 aa12.88□□□□□ -0.35
CDK11B-201ENST00000340677 OVOL3O00110 214 aa12.88□□□□□ -0.35
CDK11B-201ENST00000340677 WNT9BO14905 357 aa12.88□□□□□ -0.35
CDK11B-201ENST00000340677 ZZEF1O43149 2961 aa12.88□□□□□ -0.35
CDK11B-201ENST00000340677 TMEM30CPA0ZSE6 113 aa12.88□□□□□ -0.35
CDK11B-201ENST00000340677 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
CDK11B-201ENST00000340677 SDIM1Q6ZPB5 146 aa12.88□□□□□ -0.35
CDK11B-201ENST00000340677 DSPP15924 2871 aaKnown RBP12.87□□□□□ -0.35
CDK11B-201ENST00000340677 H7C423 109 aa12.87□□□□□ -0.35
CDK11B-201ENST00000340677 LINC01560Q8TB33 94 aa12.87□□□□□ -0.35
CDK11B-201ENST00000340677 LINC00205P59089 165 aa12.86□□□□□ -0.35
CDK11B-201ENST00000340677 PSPNO60542 156 aa12.86□□□□□ -0.35
CDK11B-201ENST00000340677 RNASE2P10153 161 aaKnown RBP12.86□□□□□ -0.35
CDK11B-201ENST00000340677 A0A1B0GUT8 65 aa12.85□□□□□ -0.35
CDK11B-201ENST00000340677 ARMS2P0C7Q2 107 aa12.85□□□□□ -0.35
CDK11B-201ENST00000340677 PLA2G2AP14555 144 aa12.85□□□□□ -0.35
CDK11B-201ENST00000340677 SAA4P35542 130 aa12.85□□□□□ -0.35
CDK11B-201ENST00000340677 HOXA4Q00056 320 aaPredicted RBP12.85□□□□□ -0.35
CDK11B-201ENST00000340677 RHOHQ15669 191 aa12.85□□□□□ -0.35
CDK11B-201ENST00000340677 COL6A6A6NMZ7 2263 aa12.85□□□□□ -0.35
CDK11B-201ENST00000340677 IGKV1D-17A0A075B6S4 117 aa12.85□□□□□ -0.35
CDK11B-201ENST00000340677 DEFB108AA8MXU0 73 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms