RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 RNASE3P12724 160 aaKnown RBP5.25□□□□□ -1.57
NUP43-201ENST00000340413 TMEM263Q8WUH6 116 aaKnown RBP5.25□□□□□ -1.57
NUP43-201ENST00000340413 C20orf78Q9BR46 151 aa5.25□□□□□ -1.57
NUP43-201ENST00000340413 ALKBH7Q9BT30 221 aaPredicted RBP5.25□□□□□ -1.57
NUP43-201ENST00000340413 F6UB75 175 aa5.25□□□□□ -1.57
NUP43-201ENST00000340413 ARMS2P0C7Q2 107 aa5.25□□□□□ -1.57
NUP43-201ENST00000340413 G0S2P27469 103 aa5.25□□□□□ -1.57
NUP43-201ENST00000340413 TFPI2P48307 235 aa5.25□□□□□ -1.57
NUP43-201ENST00000340413 CSNK1G2-AS1Q8NCQ2 148 aa5.25□□□□□ -1.57
NUP43-201ENST00000340413 TRBV6-5A0A0K0K1A5 114 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 KNCNA6PVL3 124 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 M0R2P5 195 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 S100A6P06703 90 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 FABP9Q0Z7S8 132 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 LINC00612Q8N6U2 182 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 DNAJC30Q96LL9 226 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 NAGKQ9UJ70 344 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 CYSRT1A8MQ03 144 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 NPSP0C0P6 89 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 S100A4P26447 101 aaKnown RBP5.24□□□□□ -1.57
NUP43-201ENST00000340413 ORMDL3Q8N138 153 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 Q8N1Y9 231 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 C11orf44Q8N8P7 122 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 PHLDA3Q9Y5J5 127 aa5.24□□□□□ -1.57
NUP43-201ENST00000340413 NSD1Q96L73 2696 aaPredicted RBP5.23□□□□□ -1.57
NUP43-201ENST00000340413 RAB4BP61018 213 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 SAMD5Q5TGI4 173 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 Q6ZWC4 215 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 C11orf72Q8NBR9 251 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 CSTL1Q9H114 145 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 KIF25-AS1Q9Y6Z4 181 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 MXRA5Q9NR99 2828 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 TMEM238LA0A1B0GVL6 79 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 H7C1H1 209 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 RS1O15537 224 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 CA1P00915 261 aaPredicted RBP5.23□□□□□ -1.57
NUP43-201ENST00000340413 SPINK13Q1W4C9 94 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 MRPL54Q6P161 138 aaKnown RBP5.23□□□□□ -1.57
NUP43-201ENST00000340413 RASL10AQ92737 203 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 SORL1Q92673 2214 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 VPS13CQ709C8 3753 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 SPINK4O60575 86 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 NTF3P20783 257 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 TWIST1Q15672 202 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 SPANXN1Q5VSR9 72 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 RNF185Q96GF1 192 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 NXT2Q9NPJ8 142 aaKnown RBP5.23□□□□□ -1.57
NUP43-201ENST00000340413 TRAV12-3A0A0B4J271 114 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 LOC105371267A0A1B0GV96 52 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 SPATA3Q8NHX4 192 aa5.23□□□□□ -1.57
NUP43-201ENST00000340413 ZNF469Q96JG9 3925 aaPredicted RBP5.22□□□□□ -1.57
NUP43-201ENST00000340413 IGKV3-7A0A075B6H7 116 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 SPRY2O43597 315 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 UFSP1Q6NVU6 142 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 C1orf158Q8N1D5 194 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 RNASE8Q8TDE3 154 aaKnown RBP5.22□□□□□ -1.57
NUP43-201ENST00000340413 NF1P21359 2839 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 CD7P09564 240 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 GIG44P09565 113 aaPredicted RBP5.22□□□□□ -1.57
NUP43-201ENST00000340413 AMN1Q8IY45 258 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 LYRM9A8MSI8 78 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 H3BVH4 76 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 SLAQ13239 276 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 KIR3DS1Q14943 382 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 MRPL51Q4U2R6 128 aaKnown RBP5.22□□□□□ -1.57
NUP43-201ENST00000340413 HIST3H2BBQ8N257 126 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 C18orf32Q8TCD1 76 aa5.22□□□□□ -1.57
NUP43-201ENST00000340413 CBY3A6NI87 242 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 A6NJY4 79 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 GZMBP10144 247 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 MIFP14174 115 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 TRAV4A0A0B4J268 109 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 M0R2Z0 102 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 RBMY1A1P0DJD3 496 aaKnown RBP5.21□□□□□ -1.58
NUP43-201ENST00000340413 RBMY1CP0DJD4 496 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 SMIM17P0DL12 118 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 PRB4P10163 310 aaPredicted RBP5.21□□□□□ -1.58
NUP43-201ENST00000340413 RBMY1FQ15415 496 aaKnown RBP5.21□□□□□ -1.58
NUP43-201ENST00000340413 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.21□□□□□ -1.58
NUP43-201ENST00000340413 TMEM18Q96B42 140 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 MAP1LC3AQ9H492 121 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 OR10AG1Q8NH19 301 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 LINC01587Q99440 93 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 SELENOKQ9Y6D0 94 aa5.21□□□□□ -1.58
NUP43-201ENST00000340413 TRBV10-1A0A0K0K1A3 114 aa5.2□□□□□ -1.58
NUP43-201ENST00000340413 LINC00315P59091 139 aa5.2□□□□□ -1.58
NUP43-201ENST00000340413 Q8N8P6 123 aa5.2□□□□□ -1.58
NUP43-201ENST00000340413 C11orf68Q9H3H3 251 aaKnown RBP5.2□□□□□ -1.58
NUP43-201ENST00000340413 NIPBLQ6KC79 2804 aaeCLIP5.2□□□□□ -1.58
NUP43-201ENST00000340413 GRIFINA4D1Z8 144 aa5.2□□□□□ -1.58
NUP43-201ENST00000340413 NCR2O95944 276 aa5.2□□□□□ -1.58
NUP43-201ENST00000340413 SRIP30626 198 aa5.2□□□□□ -1.58
NUP43-201ENST00000340413 PRELID3AQ96N28 172 aa5.2□□□□□ -1.58
NUP43-201ENST00000340413 CUBNO60494 3623 aa5.2□□□□□ -1.58
NUP43-201ENST00000340413 HIVEP1P15822 2718 aa5.2□□□□□ -1.58
NUP43-201ENST00000340413 CAMPP49913 170 aa5.2□□□□□ -1.58
NUP43-201ENST00000340413 RNF183Q96D59 192 aa5.2□□□□□ -1.58
NUP43-201ENST00000340413 RCHY1Q96PM5 261 aa5.2□□□□□ -1.58
NUP43-201ENST00000340413 J3KRW8 73 aa5.19□□□□□ -1.58
NUP43-201ENST00000340413 GNRH2O43555 120 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms