RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 OVOL1O14753 267 aa12.31□□□□□ -0.44
LITAF-201ENST00000339430 HOXA3O43365 443 aaPredicted RBP12.31□□□□□ -0.44
LITAF-201ENST00000339430 DPF1Q92782 380 aa12.31□□□□□ -0.44
LITAF-201ENST00000339430 IGLV1-40P01703 118 aa12.3□□□□□ -0.44
LITAF-201ENST00000339430 S100A4P26447 101 aaKnown RBP12.3□□□□□ -0.44
LITAF-201ENST00000339430 LENEPQ9Y5L5 61 aa12.3□□□□□ -0.44
LITAF-201ENST00000339430 ODF1Q14990 250 aa12.3□□□□□ -0.44
LITAF-201ENST00000339430 ANXA2RQ3ZCQ2 193 aa12.3□□□□□ -0.44
LITAF-201ENST00000339430 BOD1L2Q8IYS8 172 aa12.3□□□□□ -0.44
LITAF-201ENST00000339430 TRAV21A0A0B4J279 112 aa12.29□□□□□ -0.44
LITAF-201ENST00000339430 TMEM97Q5BJF2 176 aa12.29□□□□□ -0.44
LITAF-201ENST00000339430 C10orf99Q6UWK7 81 aa12.29□□□□□ -0.44
LITAF-201ENST00000339430 VPREB3Q9UKI3 123 aa12.29□□□□□ -0.44
LITAF-201ENST00000339430 IGHV4-4A0A075B6R2 117 aa12.29□□□□□ -0.44
LITAF-201ENST00000339430 A0A0G2JLM5 398 aa12.29□□□□□ -0.44
LITAF-201ENST00000339430 SMIM17P0DL12 118 aa12.29□□□□□ -0.44
LITAF-201ENST00000339430 FOSL1P15407 271 aa12.29□□□□□ -0.44
LITAF-201ENST00000339430 WFDC12Q8WWY7 111 aa12.29□□□□□ -0.44
LITAF-201ENST00000339430 DUX5Q96PT3 197 aa12.29□□□□□ -0.44
LITAF-201ENST00000339430 BAHCC1Q9P281 2608 aa12.28□□□□□ -0.44
LITAF-201ENST00000339430 C7orf71A4D174 169 aa12.28□□□□□ -0.44
LITAF-201ENST00000339430 GNRH2O43555 120 aa12.28□□□□□ -0.44
LITAF-201ENST00000339430 DAZ1Q9NQZ3 744 aaKnown RBP12.28□□□□□ -0.44
LITAF-201ENST00000339430 BRI3O95415 125 aa12.28□□□□□ -0.44
LITAF-201ENST00000339430 LAGE3Q14657 143 aa12.28□□□□□ -0.44
LITAF-201ENST00000339430 MTORP42345 2549 aa12.28□□□□□ -0.44
LITAF-201ENST00000339430 CFHR3Q02985 330 aa12.27□□□□□ -0.44
LITAF-201ENST00000339430 C14orf178Q8N769 122 aaPredicted RBP12.27□□□□□ -0.44
LITAF-201ENST00000339430 TTTY13Q9BZ97 58 aa12.27□□□□□ -0.44
LITAF-201ENST00000339430 PHLDA3Q9Y5J5 127 aa12.27□□□□□ -0.44
LITAF-201ENST00000339430 IGKV2D-26A0A0A0MRZ7 120 aa12.27□□□□□ -0.45
LITAF-201ENST00000339430 ASIPP42127 132 aa12.27□□□□□ -0.45
LITAF-201ENST00000339430 OR4C5Q8NGB2 326 aa12.27□□□□□ -0.45
LITAF-201ENST00000339430 PEF1Q9UBV8 284 aaKnown RBP12.27□□□□□ -0.45
LITAF-201ENST00000339430 AMMECR1LQ6DCA0 310 aa12.26□□□□□ -0.45
LITAF-201ENST00000339430 SMPXQ9UHP9 88 aa12.26□□□□□ -0.45
LITAF-201ENST00000339430 LY6G6DO95868 133 aa12.26□□□□□ -0.45
LITAF-201ENST00000339430 IGKCP01834 107 aa12.26□□□□□ -0.45
LITAF-201ENST00000339430 MGPP08493 103 aa12.26□□□□□ -0.45
LITAF-201ENST00000339430 RPL39LQ96EH5 51 aaKnown RBP12.26□□□□□ -0.45
LITAF-201ENST00000339430 HHLA3Q9XRX5 114 aa12.26□□□□□ -0.45
LITAF-201ENST00000339430 GTSCR1Q86UQ5 136 aa12.25□□□□□ -0.45
LITAF-201ENST00000339430 FAM19A4Q96LR4 140 aa12.25□□□□□ -0.45
LITAF-201ENST00000339430 ZMAT4Q9H898 229 aa12.25□□□□□ -0.45
LITAF-201ENST00000339430 TMEM160Q9NX00 188 aa12.25□□□□□ -0.45
LITAF-201ENST00000339430 MUC4Q99102 2169 aa12.25□□□□□ -0.45
LITAF-201ENST00000339430 MYOZ3Q8TDC0 251 aa12.25□□□□□ -0.45
LITAF-201ENST00000339430 MRAP2Q96G30 205 aa12.25□□□□□ -0.45
LITAF-201ENST00000339430 HIVEP2P31629 2446 aa12.24□□□□□ -0.45
LITAF-201ENST00000339430 SETXQ7Z333 2677 aaKnown RBP12.24□□□□□ -0.45
LITAF-201ENST00000339430 PRSS47A8MTI9 375 aa12.24□□□□□ -0.45
LITAF-201ENST00000339430 OR9G4Q8NGQ1 327 aa12.24□□□□□ -0.45
LITAF-201ENST00000339430 TRAV8-6A0A0B4J262 113 aa12.23□□□□□ -0.45
LITAF-201ENST00000339430 RASL10AQ92737 203 aa12.23□□□□□ -0.45
LITAF-201ENST00000339430 SMIM2Q9BVW6 85 aa12.23□□□□□ -0.45
LITAF-201ENST00000339430 MRPL35Q9NZE8 188 aaKnown RBP12.23□□□□□ -0.45
LITAF-201ENST00000339430 ATP5LO75964 103 aa12.23□□□□□ -0.45
LITAF-201ENST00000339430 DPM2O94777 84 aa12.23□□□□□ -0.45
LITAF-201ENST00000339430 RNASE3P12724 160 aaKnown RBP12.23□□□□□ -0.45
LITAF-201ENST00000339430 ZC2HC1BQ5TFG8 222 aa12.23□□□□□ -0.45
LITAF-201ENST00000339430 ADAMTSL5Q6ZMM2 481 aa12.23□□□□□ -0.45
LITAF-201ENST00000339430 DPH3P1Q9H4G8 78 aa12.23□□□□□ -0.45
LITAF-201ENST00000339430 HIVEP1P15822 2718 aa12.23□□□□□ -0.45
LITAF-201ENST00000339430 PSMB8P28062 276 aa12.22□□□□□ -0.45
LITAF-201ENST00000339430 SEC11AP67812 179 aa12.22□□□□□ -0.45
LITAF-201ENST00000339430 HSD52Q0P140 79 aa12.22□□□□□ -0.45
LITAF-201ENST00000339430 SUMO2P61956 95 aaKnown RBP12.21□□□□□ -0.45
LITAF-201ENST00000339430 DCANP1Q8TF63 244 aa12.21□□□□□ -0.45
LITAF-201ENST00000339430 NAA38Q9BRA0 125 aaKnown RBP12.21□□□□□ -0.45
LITAF-201ENST00000339430 CUBNO60494 3623 aa12.21□□□□□ -0.45
LITAF-201ENST00000339430 IGKV3-20P01619 116 aa12.21□□□□□ -0.46
LITAF-201ENST00000339430 APRG1Q8IVJ8 170 aa12.21□□□□□ -0.46
LITAF-201ENST00000339430 RNASE8Q8TDE3 154 aaKnown RBP12.21□□□□□ -0.46
LITAF-201ENST00000339430 AGRNO00468 2067 aa12.21□□□□□ -0.46
LITAF-201ENST00000339430 DNAJC9-AS1A6NH13 148 aa12.2□□□□□ -0.46
LITAF-201ENST00000339430 SIVA1O15304 175 aa12.2□□□□□ -0.46
LITAF-201ENST00000339430 ZNF688P0C7X2 276 aa12.2□□□□□ -0.46
LITAF-201ENST00000339430 DEFB104AQ8WTQ1 72 aa12.2□□□□□ -0.46
LITAF-201ENST00000339430 TRAV12-3A0A0B4J271 114 aa12.2□□□□□ -0.46
LITAF-201ENST00000339430 K7EMT4 169 aa12.2□□□□□ -0.46
LITAF-201ENST00000339430 TMEM86BQ8N661 226 aa12.2□□□□□ -0.46
LITAF-201ENST00000339430 RAB37Q96AX2 223 aa12.2□□□□□ -0.46
LITAF-201ENST00000339430 ID1P41134 155 aa12.19□□□□□ -0.46
LITAF-201ENST00000339430 ZNF702PQ9H963 129 aa12.19□□□□□ -0.46
LITAF-201ENST00000339430 ESM1Q9NQ30 184 aa12.19□□□□□ -0.46
LITAF-201ENST00000339430 A6NDN8 102 aa12.19□□□□□ -0.46
LITAF-201ENST00000339430 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.19□□□□□ -0.46
LITAF-201ENST00000339430 PSMG4Q5JS54 123 aa12.19□□□□□ -0.46
LITAF-201ENST00000339430 FAM159AQ6UWV7 190 aa12.19□□□□□ -0.46
LITAF-201ENST00000339430 NEGR1Q7Z3B1 354 aa12.19□□□□□ -0.46
LITAF-201ENST00000339430 AP1S3Q96PC3 154 aa12.19□□□□□ -0.46
LITAF-201ENST00000339430 JPT2Q9H910 190 aa12.19□□□□□ -0.46
LITAF-201ENST00000339430 ANK3Q12955 4377 aaKnown RBP12.18□□□□□ -0.46
LITAF-201ENST00000339430 SORL1Q92673 2214 aa12.18□□□□□ -0.46
LITAF-201ENST00000339430 A0A087WX48 190 aa12.18□□□□□ -0.46
LITAF-201ENST00000339430 KLLNB2CW77 178 aa12.18□□□□□ -0.46
LITAF-201ENST00000339430 K7EP13 123 aa12.18□□□□□ -0.46
LITAF-201ENST00000339430 NF1P21359 2839 aa12.18□□□□□ -0.46
LITAF-201ENST00000339430 SCGB2A2Q13296 93 aa12.18□□□□□ -0.46
LITAF-201ENST00000339430 TRAV12-2A0A075B6T6 113 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms