RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 F8VRH5 84 aa10.87□□□□□ -0.67
PCDH8-201ENST00000338862 MRPS12O15235 138 aaKnown RBP10.87□□□□□ -0.67
PCDH8-201ENST00000338862 TRBV12-3P01733 135 aa10.87□□□□□ -0.67
PCDH8-201ENST00000338862 KIR2DL4Q99706 377 aa10.87□□□□□ -0.67
PCDH8-201ENST00000338862 TP53TG1Q9Y2A0 90 aa10.87□□□□□ -0.67
PCDH8-201ENST00000338862 LGALS3P17931 250 aaKnown RBP10.87□□□□□ -0.67
PCDH8-201ENST00000338862 PLNP26678 52 aa10.87□□□□□ -0.67
PCDH8-201ENST00000338862 SMPXQ9UHP9 88 aa10.87□□□□□ -0.67
PCDH8-201ENST00000338862 DUSP14O95147 198 aaKnown RBP10.87□□□□□ -0.67
PCDH8-201ENST00000338862 ZNF688P0C7X2 276 aa10.87□□□□□ -0.67
PCDH8-201ENST00000338862 ZFP2Q6ZN57 461 aa10.87□□□□□ -0.67
PCDH8-201ENST00000338862 ORMDL2Q53FV1 153 aa10.86□□□□□ -0.67
PCDH8-201ENST00000338862 RNASE13Q5GAN3 156 aaKnown RBP10.86□□□□□ -0.67
PCDH8-201ENST00000338862 SPINK8P0C7L1 97 aa10.86□□□□□ -0.67
PCDH8-201ENST00000338862 RAB9AP51151 201 aa10.86□□□□□ -0.67
PCDH8-201ENST00000338862 Q8N9W7 124 aa10.86□□□□□ -0.67
PCDH8-201ENST00000338862 DCHS2Q6V1P9 2916 aa10.85□□□□□ -0.67
PCDH8-201ENST00000338862 TRAV21A0A0B4J279 112 aa10.85□□□□□ -0.67
PCDH8-201ENST00000338862 F8W735 103 aaPredicted RBP10.85□□□□□ -0.67
PCDH8-201ENST00000338862 TNFRSF13BO14836 293 aaPredicted RBP10.85□□□□□ -0.67
PCDH8-201ENST00000338862 OPRPNQ99935 248 aaPredicted RBP10.85□□□□□ -0.67
PCDH8-201ENST00000338862 UNQ9165/PRO28630Q6UXU0 137 aa10.85□□□□□ -0.67
PCDH8-201ENST00000338862 PLEKHB2Q96CS7 222 aa10.85□□□□□ -0.67
PCDH8-201ENST00000338862 TRAV41A0A0B4J266 112 aa10.85□□□□□ -0.67
PCDH8-201ENST00000338862 OVOL3O00110 214 aa10.85□□□□□ -0.67
PCDH8-201ENST00000338862 RRN3P1Q2M238 152 aa10.85□□□□□ -0.67
PCDH8-201ENST00000338862 LY6DQ14210 128 aa10.84□□□□□ -0.67
PCDH8-201ENST00000338862 DPH3P1Q9H4G8 78 aa10.84□□□□□ -0.67
PCDH8-201ENST00000338862 ABCA2Q9BZC7 2435 aa10.84□□□□□ -0.67
PCDH8-201ENST00000338862 CUBNO60494 3623 aa10.84□□□□□ -0.67
PCDH8-201ENST00000338862 PRR9Q5T870 116 aa10.84□□□□□ -0.67
PCDH8-201ENST00000338862 U3KQK5 164 aa10.84□□□□□ -0.67
PCDH8-201ENST00000338862 TRAV8-2A0A0B4J237 113 aa10.84□□□□□ -0.67
PCDH8-201ENST00000338862 OR11H6Q8NGC7 330 aa10.84□□□□□ -0.67
PCDH8-201ENST00000338862 F8W1H4 67 aa10.83□□□□□ -0.68
PCDH8-201ENST00000338862 LY6LH3BQJ8 138 aa10.83□□□□□ -0.68
PCDH8-201ENST00000338862 DLX4Q92988 240 aaPredicted RBP10.83□□□□□ -0.68
PCDH8-201ENST00000338862 HOXB4P17483 251 aaPredicted RBP10.83□□□□□ -0.68
PCDH8-201ENST00000338862 KLK9Q9UKQ9 250 aa10.83□□□□□ -0.68
PCDH8-201ENST00000338862 IGHG4P01861 327 aa10.83□□□□□ -0.68
PCDH8-201ENST00000338862 NPBQ8NG41 125 aa10.83□□□□□ -0.68
PCDH8-201ENST00000338862 MSRB2Q9Y3D2 182 aa10.83□□□□□ -0.68
PCDH8-201ENST00000338862 KNCNA6PVL3 124 aa10.82□□□□□ -0.68
PCDH8-201ENST00000338862 LINC01559Q495D7 138 aa10.82□□□□□ -0.68
PCDH8-201ENST00000338862 CCDC140Q96MF4 163 aa10.82□□□□□ -0.68
PCDH8-201ENST00000338862 PSMG4Q5JS54 123 aa10.82□□□□□ -0.68
PCDH8-201ENST00000338862 M0R1W7 72 aa10.82□□□□□ -0.68
PCDH8-201ENST00000338862 FAM110DQ8TAY7 271 aaPredicted RBP10.82□□□□□ -0.68
PCDH8-201ENST00000338862 RHPN1-AS1Q9BWJ2 59 aa10.82□□□□□ -0.68
PCDH8-201ENST00000338862 JMJD1CQ15652 2540 aa10.82□□□□□ -0.68
PCDH8-201ENST00000338862 IGHV3OR16-12A0A075B7B8 117 aa10.81□□□□□ -0.68
PCDH8-201ENST00000338862 TRBV6-1A0A0K0K1D8 114 aa10.81□□□□□ -0.68
PCDH8-201ENST00000338862 C9JAW5 83 aa10.81□□□□□ -0.68
PCDH8-201ENST00000338862 TMEM95Q3KNT9 176 aa10.81□□□□□ -0.68
PCDH8-201ENST00000338862 SPXQ9BT56 116 aa10.81□□□□□ -0.68
PCDH8-201ENST00000338862 SPANXB1Q9NS25 103 aaPredicted RBP10.81□□□□□ -0.68
PCDH8-201ENST00000338862 H3BUX3 64 aa10.81□□□□□ -0.68
PCDH8-201ENST00000338862 LGALS1P09382 135 aaKnown RBP10.81□□□□□ -0.68
PCDH8-201ENST00000338862 C20orf173Q96LM9 149 aa10.81□□□□□ -0.68
PCDH8-201ENST00000338862 CLUHP3Q96NS8 147 aa10.81□□□□□ -0.68
PCDH8-201ENST00000338862 GATD1Q8NB37 220 aa10.8□□□□□ -0.68
PCDH8-201ENST00000338862 ABCA12Q86UK0 2595 aa10.8□□□□□ -0.68
PCDH8-201ENST00000338862 NAV2Q8IVL1 2488 aa10.8□□□□□ -0.68
PCDH8-201ENST00000338862 NPFFO15130 113 aa10.8□□□□□ -0.68
PCDH8-201ENST00000338862 GEMIN7Q9H840 131 aaKnown RBP10.8□□□□□ -0.68
PCDH8-201ENST00000338862 FN1P02751 2386 aaKnown RBP10.8□□□□□ -0.68
PCDH8-201ENST00000338862 E9PLD3 99 aa10.79□□□□□ -0.68
PCDH8-201ENST00000338862 BAALCQ8WXS3 180 aa10.79□□□□□ -0.68
PCDH8-201ENST00000338862 ATP6V0BQ99437 205 aa10.79□□□□□ -0.68
PCDH8-201ENST00000338862 SDHAF1A6NFY7 115 aa10.79□□□□□ -0.68
PCDH8-201ENST00000338862 C11orf86A6NJI1 115 aa10.79□□□□□ -0.68
PCDH8-201ENST00000338862 BLCAPP62952 87 aa10.79□□□□□ -0.68
PCDH8-201ENST00000338862 A8MWV9 139 aa10.79□□□□□ -0.68
PCDH8-201ENST00000338862 NRACQ8N912 160 aa10.78□□□□□ -0.68
PCDH8-201ENST00000338862 MAPK1IP1LQ8NDC0 245 aa10.78□□□□□ -0.68
PCDH8-201ENST00000338862 RASL10AQ92737 203 aa10.78□□□□□ -0.68
PCDH8-201ENST00000338862 SPINK13Q1W4C9 94 aa10.78□□□□□ -0.68
PCDH8-201ENST00000338862 HIGD1BQ9P298 99 aa10.78□□□□□ -0.68
PCDH8-201ENST00000338862 ZNF876PQ49A33 203 aa10.78□□□□□ -0.68
PCDH8-201ENST00000338862 LYRM7Q5U5X0 104 aa10.78□□□□□ -0.68
PCDH8-201ENST00000338862 LRRK2Q5S007 2527 aa10.77□□□□□ -0.68
PCDH8-201ENST00000338862 C9orf139Q6ZV77 190 aa10.77□□□□□ -0.69
PCDH8-201ENST00000338862 ZNF625Q96I27 306 aaPredicted RBP10.77□□□□□ -0.69
PCDH8-201ENST00000338862 IGHV7-4-1A0A0J9YVY3 117 aa10.77□□□□□ -0.69
PCDH8-201ENST00000338862 MINOS1Q5TGZ0 78 aa10.77□□□□□ -0.69
PCDH8-201ENST00000338862 ZFAND3Q9H8U3 227 aa10.77□□□□□ -0.69
PCDH8-201ENST00000338862 MINOS1-NBL1R4GNA1 71 aa10.77□□□□□ -0.69
PCDH8-201ENST00000338862 TRAV26-1A0A087WT03 109 aa10.76□□□□□ -0.69
PCDH8-201ENST00000338862 EDN2P20800 178 aa10.76□□□□□ -0.69
PCDH8-201ENST00000338862 TM2D2Q9BX73 214 aa10.76□□□□□ -0.69
PCDH8-201ENST00000338862 TRBV7-1A0A0A6YYK4 115 aa10.76□□□□□ -0.69
PCDH8-201ENST00000338862 MT-ATP8P03928 68 aa10.76□□□□□ -0.69
PCDH8-201ENST00000338862 MRAP2Q96G30 205 aa10.76□□□□□ -0.69
PCDH8-201ENST00000338862 CELSR1Q9NYQ6 3014 aa10.76□□□□□ -0.69
PCDH8-201ENST00000338862 DGAT2L7PQ6IED9 249 aa10.76□□□□□ -0.69
PCDH8-201ENST00000338862 VCX2Q9H322 139 aa10.76□□□□□ -0.69
PCDH8-201ENST00000338862 TRPT1Q86TN4 253 aaKnown RBP10.75□□□□□ -0.69
PCDH8-201ENST00000338862 ANAPC13Q9BS18 74 aa10.75□□□□□ -0.69
PCDH8-201ENST00000338862 TRBV20-1A0A075B6N2 111 aa10.75□□□□□ -0.69
PCDH8-201ENST00000338862 CENPVL3A0A0U1RRI6 287 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms