RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 Q9UFV3 132 aa10.33□□□□□ -0.76
COL2A1-201ENST00000337299 IGLV3-9A0A075B6K5 115 aa10.33□□□□□ -0.76
COL2A1-201ENST00000337299 TRAV13-1A0A0B4J241 112 aa10.33□□□□□ -0.76
COL2A1-201ENST00000337299 KNCNA6PVL3 124 aa10.33□□□□□ -0.76
COL2A1-201ENST00000337299 Q71RC1 249 aaPredicted RBP10.33□□□□□ -0.76
COL2A1-201ENST00000337299 MUSTN1Q8IVN3 82 aa10.33□□□□□ -0.76
COL2A1-201ENST00000337299 CHCHD5Q9BSY4 110 aa10.33□□□□□ -0.76
COL2A1-201ENST00000337299 CCDC179H3BU77 68 aa10.33□□□□□ -0.76
COL2A1-201ENST00000337299 GAS8-AS1O95177 125 aa10.33□□□□□ -0.76
COL2A1-201ENST00000337299 JMJD1CQ15652 2540 aa10.32□□□□□ -0.76
COL2A1-201ENST00000337299 IGHG3P01860 377 aa10.32□□□□□ -0.76
COL2A1-201ENST00000337299 RPL39P62891 51 aaKnown RBP10.32□□□□□ -0.76
COL2A1-201ENST00000337299 PHLDA1Q8WV24 401 aaPredicted RBP10.32□□□□□ -0.76
COL2A1-201ENST00000337299 NDUFA12Q9UI09 145 aa10.32□□□□□ -0.76
COL2A1-201ENST00000337299 RBAKDNA6NC62 111 aa10.32□□□□□ -0.76
COL2A1-201ENST00000337299 G3V318 75 aa10.32□□□□□ -0.76
COL2A1-201ENST00000337299 LRRK2Q5S007 2527 aa10.32□□□□□ -0.76
COL2A1-201ENST00000337299 OVOL1O14753 267 aa10.32□□□□□ -0.76
COL2A1-201ENST00000337299 GNRH2O43555 120 aa10.32□□□□□ -0.76
COL2A1-201ENST00000337299 CRIP1P50238 77 aa10.32□□□□□ -0.76
COL2A1-201ENST00000337299 TEX49A0A1B0GTD5 131 aa10.31□□□□□ -0.76
COL2A1-201ENST00000337299 C11orf86A6NJI1 115 aa10.31□□□□□ -0.76
COL2A1-201ENST00000337299 MSMPQ1L6U9 139 aa10.31□□□□□ -0.76
COL2A1-201ENST00000337299 SPANXA1Q9NS26 97 aa10.31□□□□□ -0.76
COL2A1-201ENST00000337299 F6UB75 175 aa10.31□□□□□ -0.76
COL2A1-201ENST00000337299 K7EIM0 57 aa10.31□□□□□ -0.76
COL2A1-201ENST00000337299 ATP5J2P56134 94 aa10.31□□□□□ -0.76
COL2A1-201ENST00000337299 MOB4Q9Y3A3 225 aa10.31□□□□□ -0.76
COL2A1-201ENST00000337299 C9orf139Q6ZV77 190 aa10.31□□□□□ -0.76
COL2A1-201ENST00000337299 NDUFA11Q86Y39 141 aa10.31□□□□□ -0.76
COL2A1-201ENST00000337299 ATP6V0E2Q8NHE4 81 aa10.31□□□□□ -0.76
COL2A1-201ENST00000337299 FASNP49327 2511 aaKnown RBP10.31□□□□□ -0.76
COL2A1-201ENST00000337299 GATA3P23771 443 aa10.3□□□□□ -0.76
COL2A1-201ENST00000337299 Q8N1Y9 231 aa10.3□□□□□ -0.76
COL2A1-201ENST00000337299 EPG5Q9HCE0 2579 aa10.3□□□□□ -0.76
COL2A1-201ENST00000337299 PRSS33Q8NF86 280 aa10.3□□□□□ -0.76
COL2A1-201ENST00000337299 TRAV4A0A0B4J268 109 aa10.3□□□□□ -0.76
COL2A1-201ENST00000337299 I3L2K1 104 aa10.3□□□□□ -0.76
COL2A1-201ENST00000337299 GATA4P43694 442 aa10.3□□□□□ -0.76
COL2A1-201ENST00000337299 LY6G5BQ8NDX9 201 aa10.3□□□□□ -0.76
COL2A1-201ENST00000337299 VMO1Q7Z5L0 202 aa10.3□□□□□ -0.76
COL2A1-201ENST00000337299 PRIMA1Q86XR5 153 aa10.3□□□□□ -0.76
COL2A1-201ENST00000337299 SVIPQ8NHG7 77 aa10.3□□□□□ -0.76
COL2A1-201ENST00000337299 IGLV1-44P01699 117 aa10.29□□□□□ -0.76
COL2A1-201ENST00000337299 DEFB1P60022 68 aa10.29□□□□□ -0.76
COL2A1-201ENST00000337299 ZNF672Q499Z4 452 aaPredicted RBP10.29□□□□□ -0.76
COL2A1-201ENST00000337299 NCKAP5O14513 1909 aa10.29□□□□□ -0.76
COL2A1-201ENST00000337299 PIP4P1Q86T03 277 aa10.29□□□□□ -0.76
COL2A1-201ENST00000337299 DYNLRB2Q8TF09 96 aa10.29□□□□□ -0.76
COL2A1-201ENST00000337299 BAALCQ8WXS3 180 aa10.29□□□□□ -0.76
COL2A1-201ENST00000337299 CLEC2BQ92478 149 aa10.29□□□□□ -0.76
COL2A1-201ENST00000337299 CTSZQ9UBR2 303 aa10.29□□□□□ -0.76
COL2A1-201ENST00000337299 MBD3L4A6NDZ8 208 aaPredicted RBP10.29□□□□□ -0.76
COL2A1-201ENST00000337299 MBD3L3A6NE82 208 aaPredicted RBP10.29□□□□□ -0.76
COL2A1-201ENST00000337299 MBD3L5A6NJ08 208 aaPredicted RBP10.29□□□□□ -0.76
COL2A1-201ENST00000337299 RPL32P62910 135 aaKnown RBP10.29□□□□□ -0.76
COL2A1-201ENST00000337299 MBD3L2Q8NHZ7 208 aaPredicted RBP10.29□□□□□ -0.76
COL2A1-201ENST00000337299 TMEM190Q8WZ59 177 aa10.29□□□□□ -0.76
COL2A1-201ENST00000337299 A0A0J9YXV3 536 aa10.28□□□□□ -0.76
COL2A1-201ENST00000337299 LINC00158P58513 81 aa10.28□□□□□ -0.76
COL2A1-201ENST00000337299 DAND5Q8N907 189 aa10.28□□□□□ -0.76
COL2A1-201ENST00000337299 C11orf68Q9H3H3 251 aaKnown RBP10.28□□□□□ -0.76
COL2A1-201ENST00000337299 TRACP01848 142 aa10.28□□□□□ -0.76
COL2A1-201ENST00000337299 RNF5Q99942 180 aa10.28□□□□□ -0.76
COL2A1-201ENST00000337299 HIVEP2P31629 2446 aa10.28□□□□□ -0.76
COL2A1-201ENST00000337299 TMEM141Q96I45 108 aa10.27□□□□□ -0.77
COL2A1-201ENST00000337299 TRAV12-2A0A075B6T6 113 aa10.27□□□□□ -0.77
COL2A1-201ENST00000337299 CRPP02741 224 aa10.27□□□□□ -0.77
COL2A1-201ENST00000337299 CFAP126Q5VTH2 177 aa10.27□□□□□ -0.77
COL2A1-201ENST00000337299 MORN3Q6PF18 240 aaPredicted RBP10.27□□□□□ -0.77
COL2A1-201ENST00000337299 KLK9Q9UKQ9 250 aa10.27□□□□□ -0.77
COL2A1-201ENST00000337299 LHBP01229 141 aa10.26□□□□□ -0.77
COL2A1-201ENST00000337299 MYCNOSP40205 109 aa10.26□□□□□ -0.77
COL2A1-201ENST00000337299 LINC00311Q8N616 119 aa10.26□□□□□ -0.77
COL2A1-201ENST00000337299 WDFY4Q6ZS81 3184 aa10.26□□□□□ -0.77
COL2A1-201ENST00000337299 TRAV41A0A0B4J266 112 aa10.26□□□□□ -0.77
COL2A1-201ENST00000337299 ATP6V0E1O15342 81 aa10.26□□□□□ -0.77
COL2A1-201ENST00000337299 PAX4O43316 350 aa10.26□□□□□ -0.77
COL2A1-201ENST00000337299 IGLV2-23P01705 113 aa10.26□□□□□ -0.77
COL2A1-201ENST00000337299 OPRPNQ99935 248 aaPredicted RBP10.26□□□□□ -0.77
COL2A1-201ENST00000337299 SYNJ2BPP57105 145 aa10.26□□□□□ -0.77
COL2A1-201ENST00000337299 LINC01587Q99440 93 aa10.26□□□□□ -0.77
COL2A1-201ENST00000337299 TRGV11A0A075B6L2 103 aa10.25□□□□□ -0.77
COL2A1-201ENST00000337299 IGHV3-38A0A0C4DH36 116 aa10.25□□□□□ -0.77
COL2A1-201ENST00000337299 TINCRA0A1B0GVN0 87 aa10.25□□□□□ -0.77
COL2A1-201ENST00000337299 IGKV3D-7A0A0C4DH55 119 aa10.25□□□□□ -0.77
COL2A1-201ENST00000337299 CFAP54Q96N23 3096 aa10.25□□□□□ -0.77
COL2A1-201ENST00000337299 HOXD3P31249 432 aaPredicted RBP10.24□□□□□ -0.77
COL2A1-201ENST00000337299 C7orf69Q9H7B7 122 aa10.24□□□□□ -0.77
COL2A1-201ENST00000337299 RHPN1-AS1Q9BWJ2 59 aa10.24□□□□□ -0.77
COL2A1-201ENST00000337299 TMEM126AQ9H061 195 aa10.24□□□□□ -0.77
COL2A1-201ENST00000337299 FAM215AQ9Y5M1 114 aa10.24□□□□□ -0.77
COL2A1-201ENST00000337299 ABCA12Q86UK0 2595 aa10.24□□□□□ -0.77
COL2A1-201ENST00000337299 CRYGCP07315 174 aa10.24□□□□□ -0.77
COL2A1-201ENST00000337299 RUSC1-AS1Q66K80 236 aa10.24□□□□□ -0.77
COL2A1-201ENST00000337299 ITLN2Q8WWU7 325 aaPredicted RBP10.24□□□□□ -0.77
COL2A1-201ENST00000337299 IGLV2-11P01706 119 aa10.24□□□□□ -0.77
COL2A1-201ENST00000337299 IGHG4P01861 327 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 CGB3P0DN86 165 aa10.23□□□□□ -0.77
COL2A1-201ENST00000337299 CGB7P0DN87 165 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms