RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 IL36BQ9NZH7 164 aa12.47□□□□□ -0.41
CHGA-202ENST00000334654 SNURFLB1AK76 121 aa12.46□□□□□ -0.41
CHGA-202ENST00000334654 SPINK4O60575 86 aa12.46□□□□□ -0.41
CHGA-202ENST00000334654 ARMS2P0C7Q2 107 aa12.46□□□□□ -0.41
CHGA-202ENST00000334654 IGLC6P0CF74 106 aa12.46□□□□□ -0.41
CHGA-202ENST00000334654 LINC00612Q8N6U2 182 aa12.46□□□□□ -0.41
CHGA-202ENST00000334654 SPXQ9BT56 116 aa12.46□□□□□ -0.41
CHGA-202ENST00000334654 SSBP4Q9BWG4 385 aaPredicted RBP12.46□□□□□ -0.41
CHGA-202ENST00000334654 LYRM9A8MSI8 78 aa12.46□□□□□ -0.42
CHGA-202ENST00000334654 H3BVH4 76 aa12.46□□□□□ -0.42
CHGA-202ENST00000334654 RPS20P60866 119 aaKnown RBP12.46□□□□□ -0.42
CHGA-202ENST00000334654 CT83Q5H943 113 aa12.46□□□□□ -0.42
CHGA-202ENST00000334654 TMEM88Q6PEY1 159 aa12.46□□□□□ -0.42
CHGA-202ENST00000334654 OR10G8Q8NGN5 311 aa12.46□□□□□ -0.42
CHGA-202ENST00000334654 SNAI2O43623 268 aa12.45□□□□□ -0.42
CHGA-202ENST00000334654 SPART-AS1P0CW21 52 aa12.45□□□□□ -0.42
CHGA-202ENST00000334654 MED14OSP0DP75 135 aa12.45□□□□□ -0.42
CHGA-202ENST00000334654 S100PP25815 95 aa12.45□□□□□ -0.42
CHGA-202ENST00000334654 S100A4P26447 101 aaKnown RBP12.45□□□□□ -0.42
CHGA-202ENST00000334654 Q6ZTI0 123 aa12.45□□□□□ -0.42
CHGA-202ENST00000334654 GTSF1Q8WW33 167 aa12.45□□□□□ -0.42
CHGA-202ENST00000334654 TRAV9-1A0A075B6T8 112 aa12.44□□□□□ -0.42
CHGA-202ENST00000334654 CBLN2Q8IUK8 224 aa12.44□□□□□ -0.42
CHGA-202ENST00000334654 RASL10AQ92737 203 aa12.44□□□□□ -0.42
CHGA-202ENST00000334654 PTH2Q96A98 100 aa12.44□□□□□ -0.42
CHGA-202ENST00000334654 MRPL16Q9NX20 251 aaKnown RBP12.44□□□□□ -0.42
CHGA-202ENST00000334654 NACAE9PAV3 2078 aa12.43□□□□□ -0.42
CHGA-202ENST00000334654 A8MWL6 223 aa12.43□□□□□ -0.42
CHGA-202ENST00000334654 M0R2P5 195 aa12.43□□□□□ -0.42
CHGA-202ENST00000334654 OR5AL1P0C617 328 aa12.43□□□□□ -0.42
CHGA-202ENST00000334654 C12orf74Q32Q52 190 aa12.43□□□□□ -0.42
CHGA-202ENST00000334654 LGALS9BQ3B8N2 356 aa12.43□□□□□ -0.42
CHGA-202ENST00000334654 KCNIP4Q6PIL6 250 aa12.43□□□□□ -0.42
CHGA-202ENST00000334654 TRBV24-1A0A075B6N3 115 aa12.42□□□□□ -0.42
CHGA-202ENST00000334654 XKRY2A2RUG3 117 aa12.42□□□□□ -0.42
CHGA-202ENST00000334654 COLCA2A8K830 154 aa12.42□□□□□ -0.42
CHGA-202ENST00000334654 FOXA3P55318 350 aaPredicted RBP12.42□□□□□ -0.42
CHGA-202ENST00000334654 TSKUQ8WUA8 353 aa12.42□□□□□ -0.42
CHGA-202ENST00000334654 TRGV1A0A0A0MS02 117 aa12.41□□□□□ -0.42
CHGA-202ENST00000334654 GAGE12BA1L429 117 aa12.41□□□□□ -0.42
CHGA-202ENST00000334654 GAGE7O76087 117 aa12.41□□□□□ -0.42
CHGA-202ENST00000334654 GAGE12FP0CL80 117 aa12.41□□□□□ -0.42
CHGA-202ENST00000334654 GAGE12GP0CL81 117 aa12.41□□□□□ -0.42
CHGA-202ENST00000334654 GAGE12IP0CL82 117 aa12.41□□□□□ -0.42
CHGA-202ENST00000334654 NANOS2P60321 138 aaKnown RBP12.41□□□□□ -0.42
CHGA-202ENST00000334654 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
CHGA-202ENST00000334654 FER1L6-AS1Q8NA97 138 aa12.41□□□□□ -0.42
CHGA-202ENST00000334654 OR10AG1Q8NH19 301 aa12.41□□□□□ -0.42
CHGA-202ENST00000334654 C11orf45Q8TAV5 145 aa12.41□□□□□ -0.42
CHGA-202ENST00000334654 YPEL4Q96NS1 127 aa12.41□□□□□ -0.42
CHGA-202ENST00000334654 DNAH7Q8WXX0 4024 aa12.41□□□□□ -0.42
CHGA-202ENST00000334654 MUC21A0A0G2JKD1 596 aa12.4□□□□□ -0.42
CHGA-202ENST00000334654 MUC21A0A140T8X8 626 aa12.4□□□□□ -0.42
CHGA-202ENST00000334654 TEX48A0A1B0GUV7 120 aa12.4□□□□□ -0.42
CHGA-202ENST00000334654 DEFB130BP0DP73 79 aa12.4□□□□□ -0.42
CHGA-202ENST00000334654 DEFB130AP0DP74 79 aa12.4□□□□□ -0.42
CHGA-202ENST00000334654 ELOBQ15370 118 aa12.4□□□□□ -0.42
CHGA-202ENST00000334654 ZNF876PQ49A33 203 aa12.4□□□□□ -0.42
CHGA-202ENST00000334654 LYZL1Q6UWQ5 148 aa12.4□□□□□ -0.42
CHGA-202ENST00000334654 POM121L12Q8N7R1 296 aa12.4□□□□□ -0.42
CHGA-202ENST00000334654 GFRA4Q9GZZ7 299 aa12.4□□□□□ -0.42
CHGA-202ENST00000334654 A0A1W2PPQ1 181 aa12.4□□□□□ -0.43
CHGA-202ENST00000334654 FAM231BA6NCW3 169 aa12.4□□□□□ -0.43
CHGA-202ENST00000334654 NXPH4O95158 308 aa12.4□□□□□ -0.43
CHGA-202ENST00000334654 CTRLP40313 264 aa12.4□□□□□ -0.43
CHGA-202ENST00000334654 C18orf15Q96N68 181 aa12.4□□□□□ -0.43
CHGA-202ENST00000334654 SMIM27A0A1W2PRY6 76 aa12.39□□□□□ -0.43
CHGA-202ENST00000334654 DAD1P61803 113 aa12.39□□□□□ -0.43
CHGA-202ENST00000334654 PIK3CD-AS1Q5SR53 167 aa12.39□□□□□ -0.43
CHGA-202ENST00000334654 Q6ZTC4 211 aa12.39□□□□□ -0.43
CHGA-202ENST00000334654 PHLDA3Q9Y5J5 127 aa12.39□□□□□ -0.43
CHGA-202ENST00000334654 F2Z2F3 143 aa12.38□□□□□ -0.43
CHGA-202ENST00000334654 TPPP3Q9BW30 176 aa12.38□□□□□ -0.43
CHGA-202ENST00000334654 CNFNQ9BYD5 112 aa12.38□□□□□ -0.43
CHGA-202ENST00000334654 JPT2Q9H910 190 aa12.38□□□□□ -0.43
CHGA-202ENST00000334654 IGHV4-4A0A075B6R2 117 aa12.37□□□□□ -0.43
CHGA-202ENST00000334654 HIGD1CA8MV81 97 aa12.37□□□□□ -0.43
CHGA-202ENST00000334654 PGLYRP4Q96LB8 373 aa12.37□□□□□ -0.43
CHGA-202ENST00000334654 NDUFAF3Q9BU61 184 aa12.37□□□□□ -0.43
CHGA-202ENST00000334654 MSRB1Q9NZV6 116 aa12.37□□□□□ -0.43
CHGA-202ENST00000334654 M0R381 172 aa12.36□□□□□ -0.43
CHGA-202ENST00000334654 RAB5AP20339 215 aa12.36□□□□□ -0.43
CHGA-202ENST00000334654 WDR73Q6P4I2 378 aa12.36□□□□□ -0.43
CHGA-202ENST00000334654 ZFP82Q8N141 532 aa12.36□□□□□ -0.43
CHGA-202ENST00000334654 NUP35Q8NFH5 326 aa12.36□□□□□ -0.43
CHGA-202ENST00000334654 TRGV2A0A075B6R0 118 aa12.35□□□□□ -0.43
CHGA-202ENST00000334654 RS1O15537 224 aa12.35□□□□□ -0.43
CHGA-202ENST00000334654 SSTP61278 116 aa12.35□□□□□ -0.43
CHGA-202ENST00000334654 COX19Q49B96 90 aa12.35□□□□□ -0.43
CHGA-202ENST00000334654 CFAP126Q5VTH2 177 aa12.35□□□□□ -0.43
CHGA-202ENST00000334654 CSMD3Q7Z407 3707 aa12.35□□□□□ -0.43
CHGA-202ENST00000334654 NTF3P20783 257 aa12.34□□□□□ -0.43
CHGA-202ENST00000334654 SPANXN1Q5VSR9 72 aa12.34□□□□□ -0.43
CHGA-202ENST00000334654 SYT8Q8NBV8 401 aa12.34□□□□□ -0.43
CHGA-202ENST00000334654 ZNF479Q96JC4 524 aa12.34□□□□□ -0.43
CHGA-202ENST00000334654 FAM210BQ96KR6 192 aa12.34□□□□□ -0.43
CHGA-202ENST00000334654 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
CHGA-202ENST00000334654 TRAV4A0A0B4J268 109 aa12.34□□□□□ -0.43
CHGA-202ENST00000334654 CACNG7P62955 275 aa12.34□□□□□ -0.43
CHGA-202ENST00000334654 UFSP1Q6NVU6 142 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms