RNA–Protein interactions for RNA: ENST00000332175.12

PTPRM-201, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRM, Length 6,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-201ENST00000332175 C15orf53Q8NAA6 179 aa17.41■□□□□ 0.38
PTPRM-201ENST00000332175 KLF2Q9Y5W3 355 aaPredicted RBP17.41■□□□□ 0.38
PTPRM-201ENST00000332175 F8W1H4 67 aa17.4■□□□□ 0.38
PTPRM-201ENST00000332175 CCL18P55774 89 aa17.4■□□□□ 0.38
PTPRM-201ENST00000332175 TIRAPP58753 221 aa17.4■□□□□ 0.38
PTPRM-201ENST00000332175 K7EIM0 57 aa17.39■□□□□ 0.37
PTPRM-201ENST00000332175 IGHV4-28A0A0C4DH34 117 aa17.39■□□□□ 0.37
PTPRM-201ENST00000332175 ATP5G1P05496 136 aa17.39■□□□□ 0.37
PTPRM-201ENST00000332175 C5orf56Q8N8D9 126 aa17.39■□□□□ 0.37
PTPRM-201ENST00000332175 ETDCA0A1B0GVM5 59 aa17.39■□□□□ 0.37
PTPRM-201ENST00000332175 ZNF503Q96F45 646 aa17.39■□□□□ 0.37
PTPRM-201ENST00000332175 MRPL23Q16540 153 aaKnown RBP17.38■□□□□ 0.37
PTPRM-201ENST00000332175 C12orf74Q32Q52 190 aa17.38■□□□□ 0.37
PTPRM-201ENST00000332175 IGLV11-55A0A075B6I3 123 aa17.38■□□□□ 0.37
PTPRM-201ENST00000332175 ZFP36P26651 326 aaKnown RBP17.37■□□□□ 0.37
PTPRM-201ENST00000332175 ANAPC1Q9H1A4 1944 aa17.37■□□□□ 0.37
PTPRM-201ENST00000332175 CTSGP08311 255 aa17.36■□□□□ 0.37
PTPRM-201ENST00000332175 C10orf91Q5T1B1 145 aa17.36■□□□□ 0.37
PTPRM-201ENST00000332175 Q8N9W7 124 aa17.36■□□□□ 0.37
PTPRM-201ENST00000332175 MSRB1Q9NZV6 116 aa17.36■□□□□ 0.37
PTPRM-201ENST00000332175 C16orf54Q6UWD8 224 aa17.36■□□□□ 0.37
PTPRM-201ENST00000332175 PCP2Q8IVA1 136 aa17.36■□□□□ 0.37
PTPRM-201ENST00000332175 ORMDL1Q9P0S3 153 aa17.36■□□□□ 0.37
PTPRM-201ENST00000332175 TIMM17AQ99595 171 aa17.35■□□□□ 0.37
PTPRM-201ENST00000332175 K7EP13 123 aa17.35■□□□□ 0.37
PTPRM-201ENST00000332175 BAALC-AS2P0C853 105 aa17.35■□□□□ 0.37
PTPRM-201ENST00000332175 ZNF747Q9BV97 191 aa17.35■□□□□ 0.37
PTPRM-201ENST00000332175 COX7A2LO14548 114 aa17.34■□□□□ 0.37
PTPRM-201ENST00000332175 NPSP0C0P6 89 aa17.34■□□□□ 0.37
PTPRM-201ENST00000332175 DEFB1P60022 68 aa17.34■□□□□ 0.37
PTPRM-201ENST00000332175 DEFB135Q30KP9 77 aa17.34■□□□□ 0.37
PTPRM-201ENST00000332175 NTN5Q8WTR8 489 aaPredicted RBP17.34■□□□□ 0.37
PTPRM-201ENST00000332175 SPANXA1Q9NS26 97 aa17.34■□□□□ 0.37
PTPRM-201ENST00000332175 NCR3O14931 201 aa17.33■□□□□ 0.37
PTPRM-201ENST00000332175 CRYBA4P53673 196 aa17.33■□□□□ 0.37
PTPRM-201ENST00000332175 LENEPQ9Y5L5 61 aa17.33■□□□□ 0.37
PTPRM-201ENST00000332175 TRACP01848 142 aa17.33■□□□□ 0.37
PTPRM-201ENST00000332175 PRAC2D3DTV9 90 aa17.33■□□□□ 0.36
PTPRM-201ENST00000332175 IFITM1P13164 125 aa17.33■□□□□ 0.36
PTPRM-201ENST00000332175 C2orf70A6NJV1 201 aa17.33■□□□□ 0.36
PTPRM-201ENST00000332175 CFC1BP0CG36 223 aa17.33■□□□□ 0.36
PTPRM-201ENST00000332175 CFC1P0CG37 223 aa17.33■□□□□ 0.36
PTPRM-201ENST00000332175 TEX48A0A1B0GUV7 120 aa17.32■□□□□ 0.36
PTPRM-201ENST00000332175 Q8N1Y9 231 aa17.32■□□□□ 0.36
PTPRM-201ENST00000332175 HIST2H2BCQ6DN03 193 aa17.32■□□□□ 0.36
PTPRM-201ENST00000332175 HERV-K104P63124 156 aa17.31■□□□□ 0.36
PTPRM-201ENST00000332175 PATE2Q6UY27 113 aa17.31■□□□□ 0.36
PTPRM-201ENST00000332175 KRTAP27-1Q3LI81 207 aa17.31■□□□□ 0.36
PTPRM-201ENST00000332175 ANKRD29Q8N6D5 301 aa17.31■□□□□ 0.36
PTPRM-201ENST00000332175 ZFP2Q6ZN57 461 aa17.31■□□□□ 0.36
PTPRM-201ENST00000332175 HHLA3Q9XRX5 114 aa17.31■□□□□ 0.36
PTPRM-201ENST00000332175 Q8NFD4 153 aa17.31■□□□□ 0.36
PTPRM-201ENST00000332175 DAZ2Q13117 558 aaKnown RBP17.3■□□□□ 0.36
PTPRM-201ENST00000332175 DAZ4Q86SG3 579 aaKnown RBP17.3■□□□□ 0.36
PTPRM-201ENST00000332175 DAZ3Q9NR90 486 aaKnown RBP17.3■□□□□ 0.36
PTPRM-201ENST00000332175 WNK2Q9Y3S1 2297 aa17.3■□□□□ 0.36
PTPRM-201ENST00000332175 IGKV1-17P01599 117 aa17.3■□□□□ 0.36
PTPRM-201ENST00000332175 COX7B2Q8TF08 81 aa17.3■□□□□ 0.36
PTPRM-201ENST00000332175 DAND5Q8N907 189 aa17.29■□□□□ 0.36
PTPRM-201ENST00000332175 K7EMI3 77 aa17.29■□□□□ 0.36
PTPRM-201ENST00000332175 RNF152Q8N8N0 203 aa17.29■□□□□ 0.36
PTPRM-201ENST00000332175 A0A0J9YXV3 536 aa17.29■□□□□ 0.36
PTPRM-201ENST00000332175 SIVA1O15304 175 aa17.29■□□□□ 0.36
PTPRM-201ENST00000332175 NUP210Q8TEM1 1887 aaPredicted RBP17.29■□□□□ 0.36
PTPRM-201ENST00000332175 Q8N7P7 452 aa17.29■□□□□ 0.36
PTPRM-201ENST00000332175 NCKAP5O14513 1909 aa17.28■□□□□ 0.36
PTPRM-201ENST00000332175 RPL39P62891 51 aaKnown RBP17.28■□□□□ 0.36
PTPRM-201ENST00000332175 SEM1Q6ZVN7 128 aa17.28■□□□□ 0.36
PTPRM-201ENST00000332175 IL15RAQ13261 267 aa17.27■□□□□ 0.36
PTPRM-201ENST00000332175 A0A1W2PNU3 283 aaPredicted RBP17.27■□□□□ 0.36
PTPRM-201ENST00000332175 PROP1O75360 226 aa17.27■□□□□ 0.36
PTPRM-201ENST00000332175 IGF2-ASQ6U949 168 aa17.27■□□□□ 0.36
PTPRM-201ENST00000332175 LINC00173Q6ZV60 143 aa17.27■□□□□ 0.35
PTPRM-201ENST00000332175 SND1-IT1Q9HBX3 110 aa17.27■□□□□ 0.35
PTPRM-201ENST00000332175 RIF1Q5UIP0 2472 aaKnown RBP17.27■□□□□ 0.35
PTPRM-201ENST00000332175 PRB2P02812 416 aaPredicted RBP17.26■□□□□ 0.35
PTPRM-201ENST00000332175 C4orf3Q8WVX3 66 aa17.26■□□□□ 0.35
PTPRM-201ENST00000332175 NOTCH4Q99466 2003 aa17.26■□□□□ 0.35
PTPRM-201ENST00000332175 MUSTN1Q8IVN3 82 aa17.26■□□□□ 0.35
PTPRM-201ENST00000332175 Q6ZVH6 145 aa17.26■□□□□ 0.35
PTPRM-201ENST00000332175 GPR179Q6PRD1 2367 aa17.25■□□□□ 0.35
PTPRM-201ENST00000332175 WISP2O76076 250 aa17.25■□□□□ 0.35
PTPRM-201ENST00000332175 MRPL36Q9P0J6 103 aaKnown RBP17.25■□□□□ 0.35
PTPRM-201ENST00000332175 CCL25O15444 150 aa17.25■□□□□ 0.35
PTPRM-201ENST00000332175 TRBV12-3P01733 135 aa17.25■□□□□ 0.35
PTPRM-201ENST00000332175 WI2-2373I1.2A0A1W2PRP0 233 aa17.25■□□□□ 0.35
PTPRM-201ENST00000332175 UBE2AP49459 152 aa17.25■□□□□ 0.35
PTPRM-201ENST00000332175 ABCA1O95477 2261 aa17.25■□□□□ 0.35
PTPRM-201ENST00000332175 TEX22C9J3V5 150 aa17.25■□□□□ 0.35
PTPRM-201ENST00000332175 KIF26AQ9ULI4 1882 aaPredicted RBP17.24■□□□□ 0.35
PTPRM-201ENST00000332175 EML6Q6ZMW3 1958 aa17.24■□□□□ 0.35
PTPRM-201ENST00000332175 PRSS47A8MTI9 375 aa17.23■□□□□ 0.35
PTPRM-201ENST00000332175 GAGE12HA6NDE8 117 aa17.23■□□□□ 0.35
PTPRM-201ENST00000332175 PKIGQ9Y2B9 76 aa17.23■□□□□ 0.35
PTPRM-201ENST00000332175 IGLL5B9A064 214 aa17.22■□□□□ 0.35
PTPRM-201ENST00000332175 DAZAP2Q15038 168 aaPredicted RBP17.22■□□□□ 0.35
PTPRM-201ENST00000332175 SH2D6Q7Z4S9 175 aa17.22■□□□□ 0.35
PTPRM-201ENST00000332175 CLPSL1A2RUU4 121 aa17.22■□□□□ 0.35
PTPRM-201ENST00000332175 E7EUB6 86 aa17.22■□□□□ 0.35
PTPRM-201ENST00000332175 FUSP35637 526 aaKnown RBP eCLIP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms