RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 SETXQ7Z333 2677 aaKnown RBP4.3□□□□□ -1.72
SDR42E1-201ENST00000328945 C3orf22Q8N5N4 141 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 FLVCR1-AS1Q8TAF5 88 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 U3KQE9 123 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 TRAV26-2A0A0B4J265 109 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 C6orf226Q5I0X4 101 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 FXYD5Q96DB9 178 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 NDUFA4L2Q9NRX3 87 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 IGKV1-39P01597 117 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 IGKV1D-39P04432 117 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 CD177Q8N6Q3 437 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 VWCEQ96DN2 955 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 TRAV12-1A0A0B4J245 112 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 IGF2BP2-AS1Q96M15 143 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 C5orf63A6NC05 138 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 NDUFB8O95169 186 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 MSRB2Q9Y3D2 182 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 BAHCC1Q9P281 2608 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 TRBV7-1A0A0A6YYK4 115 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 IGHV3-53P01767 116 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 GATA3P23771 443 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 PIFOQ8TCI5 191 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 BAALCQ8WXS3 180 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 PRR25Q96S07 402 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 DKK4Q9UBT3 224 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 NDUFS5O43920 106 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 IGHV1-46P01743 117 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 HERVK_113P63121 156 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 MINOS1Q5TGZ0 78 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 LINC00173Q6ZV60 143 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 MINOS1-NBL1R4GNA1 71 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 CFAP46Q8IYW2 2715 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 TINCRA0A1B0GVN0 87 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 PSMB8P28062 276 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 RS1O15537 224 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 SPATA12Q7Z6I5 190 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 C5orf24Q7Z6I8 188 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 RHODO00212 210 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 ZFP36L1Q07352 338 aaKnown RBP4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 RHOHQ15669 191 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 FAM223BA6NKX1 122 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 C4orf48Q5BLP8 95 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 FAM223AQ8IWN6 122 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 CLPSL1A2RUU4 121 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 UBE2BP63146 152 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 FAM120AOSQ5T036 256 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 FOXL2NBQ6ZUU3 175 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 IGLV3-12A0A075B6K2 115 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 IGKV1-16P04430 117 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 NBL1P41271 181 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 VSIG2Q96IQ7 327 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 IGHV1-3A0A0C4DH29 117 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 TRBV10-2A0A0K0K1G8 114 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 IGHV1-8P0DP01 117 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 CPAMD8Q8IZJ3 1885 aa4.28□□□□□ -1.73
SDR42E1-201ENST00000328945 CHKB-CPT1BH3BT56 60 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PRB1P04280 392 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 RUSC1-AS1Q66K80 236 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 LINC00643Q86TS7 51 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 IGHV1-18A0A0C4DH31 117 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 E9PLD3 99 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 ATP5EP2Q5VTU8 51 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 H3BRN7 92 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 DEFB130BP0DP73 79 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 DEFB130AP0DP74 79 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 CFHR3Q02985 330 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PLA2G2EQ9NZK7 142 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 SIGLEC9Q9Y336 463 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 FAM236DA0A1B0GTK5 79 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 FAM236CP0DP71 79 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 ATP5EP56381 51 aaPredicted RBP4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 EFNA2O43921 213 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PRR20EP86478 221 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PRR20CP86479 221 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PRR20DP86480 221 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PRR20BP86481 221 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PRR20AP86496 221 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 NDUFA11Q86Y39 141 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 K7ENP7 123 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 GGNQ86UU5 652 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 C2orf70A6NJV1 201 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 DEFB104AQ8WTQ1 72 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 DMBT1Q9UGM3 2413 aaPredicted RBP4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 IGKV3D-7A0A0C4DH55 119 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 A4D1N5 150 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 CTRLP40313 264 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 THSD7BQ9C0I4 1608 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 H0YGX0 51 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 LRRC75A-AS1Q8N1F1 130 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 TNRC6BQ9UPQ9 1833 aaKnown RBP4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 IGKV1D-17A0A075B6S4 117 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 TCL1BO95988 128 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 LMO1P25800 156 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 LGALS9O00182 355 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 TEX49A0A1B0GTD5 131 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 BPESC1Q9GZL8 116 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 TMEM178BH3BS89 294 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 CFHR4Q92496 578 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 FAM240AA0A1B0GVK7 77 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms