RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 SETXQ7Z333 2677 aaKnown RBP4.3□□□□□ -1.72
SDR42E1-201ENST00000328945 C3orf22Q8N5N4 141 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 FLVCR1-AS1Q8TAF5 88 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 U3KQE9 123 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 TRAV26-2A0A0B4J265 109 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 C6orf226Q5I0X4 101 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 FXYD5Q96DB9 178 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 NDUFA4L2Q9NRX3 87 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 IGKV1-39P01597 117 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 IGKV1D-39P04432 117 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 CD177Q8N6Q3 437 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 VWCEQ96DN2 955 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 TRAV12-1A0A0B4J245 112 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 IGF2BP2-AS1Q96M15 143 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 C5orf63A6NC05 138 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 NDUFB8O95169 186 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 MSRB2Q9Y3D2 182 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 BAHCC1Q9P281 2608 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 TRBV7-1A0A0A6YYK4 115 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 IGHV3-53P01767 116 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 GATA3P23771 443 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 PIFOQ8TCI5 191 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 BAALCQ8WXS3 180 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 PRR25Q96S07 402 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 DKK4Q9UBT3 224 aa4.29□□□□□ -1.72
SDR42E1-201ENST00000328945 NDUFS5O43920 106 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 IGHV1-46P01743 117 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 HERVK_113P63121 156 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 MINOS1Q5TGZ0 78 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 LINC00173Q6ZV60 143 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 MINOS1-NBL1R4GNA1 71 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 CFAP46Q8IYW2 2715 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 TINCRA0A1B0GVN0 87 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 PSMB8P28062 276 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 RS1O15537 224 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 SPATA12Q7Z6I5 190 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 C5orf24Q7Z6I8 188 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 RHODO00212 210 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 ZFP36L1Q07352 338 aaKnown RBP4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 RHOHQ15669 191 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 FAM223BA6NKX1 122 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 C4orf48Q5BLP8 95 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 FAM223AQ8IWN6 122 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 CLPSL1A2RUU4 121 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 UBE2BP63146 152 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 FAM120AOSQ5T036 256 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 FOXL2NBQ6ZUU3 175 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 IGLV3-12A0A075B6K2 115 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 IGKV1-16P04430 117 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 NBL1P41271 181 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 VSIG2Q96IQ7 327 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 IGHV1-3A0A0C4DH29 117 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 TRBV10-2A0A0K0K1G8 114 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 IGHV1-8P0DP01 117 aa4.28□□□□□ -1.72
SDR42E1-201ENST00000328945 CPAMD8Q8IZJ3 1885 aa4.28□□□□□ -1.73
SDR42E1-201ENST00000328945 CHKB-CPT1BH3BT56 60 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PRB1P04280 392 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 RUSC1-AS1Q66K80 236 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 LINC00643Q86TS7 51 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 IGHV1-18A0A0C4DH31 117 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 E9PLD3 99 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 ATP5EP2Q5VTU8 51 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 H3BRN7 92 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 DEFB130BP0DP73 79 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 DEFB130AP0DP74 79 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 CFHR3Q02985 330 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PLA2G2EQ9NZK7 142 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 SIGLEC9Q9Y336 463 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 FAM236DA0A1B0GTK5 79 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 FAM236CP0DP71 79 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 ATP5EP56381 51 aaPredicted RBP4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 EFNA2O43921 213 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PRR20EP86478 221 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PRR20CP86479 221 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PRR20DP86480 221 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PRR20BP86481 221 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 PRR20AP86496 221 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 NDUFA11Q86Y39 141 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 K7ENP7 123 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 GGNQ86UU5 652 aa4.27□□□□□ -1.73
SDR42E1-201ENST00000328945 C2orf70A6NJV1 201 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 DEFB104AQ8WTQ1 72 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 DMBT1Q9UGM3 2413 aaPredicted RBP4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 IGKV3D-7A0A0C4DH55 119 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 A4D1N5 150 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 CTRLP40313 264 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 THSD7BQ9C0I4 1608 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 H0YGX0 51 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 LRRC75A-AS1Q8N1F1 130 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 TNRC6BQ9UPQ9 1833 aaKnown RBP4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 IGKV1D-17A0A075B6S4 117 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 TCL1BO95988 128 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 LMO1P25800 156 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 LGALS9O00182 355 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 TEX49A0A1B0GTD5 131 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 BPESC1Q9GZL8 116 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 TMEM178BH3BS89 294 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 CFHR4Q92496 578 aa4.26□□□□□ -1.73
SDR42E1-201ENST00000328945 FAM240AA0A1B0GVK7 77 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 920.5 ms