RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 H0YGX0 51 aa12.84□□□□□ -0.35
SMAD3-201ENST00000327367 LOXL1Q08397 574 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-201ENST00000327367 RITA1Q96K30 269 aa12.84□□□□□ -0.35
SMAD3-201ENST00000327367 FAM110AQ9BQ89 295 aa12.84□□□□□ -0.35
SMAD3-201ENST00000327367 PROK2Q9HC23 129 aa12.84□□□□□ -0.35
SMAD3-201ENST00000327367 DSCR9P59020 149 aa12.84□□□□□ -0.35
SMAD3-201ENST00000327367 RSPO1Q2MKA7 263 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-201ENST00000327367 HIGD1BQ9P298 99 aa12.84□□□□□ -0.35
SMAD3-201ENST00000327367 IGHV1-69DA0A0B4J2H0 117 aa12.84□□□□□ -0.35
SMAD3-201ENST00000327367 IGHV1-69P01742 117 aa12.84□□□□□ -0.35
SMAD3-201ENST00000327367 SCXQ7RTU7 201 aa12.84□□□□□ -0.35
SMAD3-201ENST00000327367 ESM1Q9NQ30 184 aa12.84□□□□□ -0.35
SMAD3-201ENST00000327367 DOCK6Q96HP0 2047 aa12.84□□□□□ -0.35
SMAD3-201ENST00000327367 ATP6V0E2Q8NHE4 81 aa12.83□□□□□ -0.35
SMAD3-201ENST00000327367 POLEQ07864 2286 aa12.83□□□□□ -0.36
SMAD3-201ENST00000327367 IGLV3-9A0A075B6K5 115 aa12.83□□□□□ -0.36
SMAD3-201ENST00000327367 Q8N1Y9 231 aa12.83□□□□□ -0.36
SMAD3-201ENST00000327367 CADP27708 2225 aa12.82□□□□□ -0.36
SMAD3-201ENST00000327367 C11orf86A6NJI1 115 aa12.82□□□□□ -0.36
SMAD3-201ENST00000327367 ETV2O00321 342 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-201ENST00000327367 IGHV3-30P01768 117 aa12.82□□□□□ -0.36
SMAD3-201ENST00000327367 IGHV3-33P01772 117 aa12.82□□□□□ -0.36
SMAD3-201ENST00000327367 IGHV3-30-3P0DP02 117 aa12.82□□□□□ -0.36
SMAD3-201ENST00000327367 IGHV3-30-5P0DP03 117 aa12.82□□□□□ -0.36
SMAD3-201ENST00000327367 PRR30Q53SZ7 412 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-201ENST00000327367 CD59P13987 128 aa12.82□□□□□ -0.36
SMAD3-201ENST00000327367 ATP5G1P05496 136 aa12.82□□□□□ -0.36
SMAD3-201ENST00000327367 DEFB136Q30KP8 78 aa12.82□□□□□ -0.36
SMAD3-201ENST00000327367 NDUFA11Q86Y39 141 aa12.82□□□□□ -0.36
SMAD3-201ENST00000327367 TOMM6Q96B49 74 aa12.81□□□□□ -0.36
SMAD3-201ENST00000327367 NRXN2Q9P2S2 1712 aa12.81□□□□□ -0.36
SMAD3-201ENST00000327367 FAM236DA0A1B0GTK5 79 aa12.81□□□□□ -0.36
SMAD3-201ENST00000327367 FAM236CP0DP71 79 aa12.81□□□□□ -0.36
SMAD3-201ENST00000327367 GP9P14770 177 aa12.81□□□□□ -0.36
SMAD3-201ENST00000327367 ODF1Q14990 250 aa12.81□□□□□ -0.36
SMAD3-201ENST00000327367 E9PLD3 99 aa12.81□□□□□ -0.36
SMAD3-201ENST00000327367 NFE4Q86UQ8 179 aa12.81□□□□□ -0.36
SMAD3-201ENST00000327367 C9orf47Q6ZRZ4 202 aa12.81□□□□□ -0.36
SMAD3-201ENST00000327367 CAMK2N2Q96S95 79 aa12.8□□□□□ -0.36
SMAD3-201ENST00000327367 DOCK3Q8IZD9 2030 aa12.8□□□□□ -0.36
SMAD3-201ENST00000327367 MSMBP08118 114 aa12.8□□□□□ -0.36
SMAD3-201ENST00000327367 PATE2Q6UY27 113 aa12.8□□□□□ -0.36
SMAD3-201ENST00000327367 SEM1Q6ZVN7 128 aa12.8□□□□□ -0.36
SMAD3-201ENST00000327367 DOPEY2Q9Y3R5 2298 aa12.8□□□□□ -0.36
SMAD3-201ENST00000327367 PRAC2D3DTV9 90 aa12.8□□□□□ -0.36
SMAD3-201ENST00000327367 DEFB1P60022 68 aa12.8□□□□□ -0.36
SMAD3-201ENST00000327367 SPANXB1Q9NS25 103 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-201ENST00000327367 DYSFO75923 2080 aa12.79□□□□□ -0.36
SMAD3-201ENST00000327367 SPRNQ5BIV9 151 aa12.79□□□□□ -0.36
SMAD3-201ENST00000327367 XIRP1Q702N8 1843 aaKnown RBP12.78□□□□□ -0.36
SMAD3-201ENST00000327367 HIGD2BQ4VC39 106 aa12.78□□□□□ -0.36
SMAD3-201ENST00000327367 C3orf22Q8N5N4 141 aa12.78□□□□□ -0.36
SMAD3-201ENST00000327367 Q8TCH9 128 aa12.78□□□□□ -0.36
SMAD3-201ENST00000327367 Q71RC1 249 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-201ENST00000327367 CEMP1Q6PRD7 247 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-201ENST00000327367 DOCK8Q8NF50 2099 aa12.78□□□□□ -0.36
SMAD3-201ENST00000327367 NDUFB1O75438 58 aa12.77□□□□□ -0.36
SMAD3-201ENST00000327367 LINC00643Q86TS7 51 aa12.77□□□□□ -0.36
SMAD3-201ENST00000327367 MIR7-3HGQ8N6C7 128 aa12.77□□□□□ -0.36
SMAD3-201ENST00000327367 H0Y9J4 135 aa12.77□□□□□ -0.37
SMAD3-201ENST00000327367 K7EQD1 137 aa12.77□□□□□ -0.37
SMAD3-201ENST00000327367 CLUHP3Q96NS8 147 aa12.77□□□□□ -0.37
SMAD3-201ENST00000327367 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.37
SMAD3-201ENST00000327367 TET1Q8NFU7 2136 aa12.77□□□□□ -0.37
SMAD3-201ENST00000327367 H3BT86 120 aa12.77□□□□□ -0.37
SMAD3-201ENST00000327367 GYPEP15421 78 aa12.77□□□□□ -0.37
SMAD3-201ENST00000327367 RNF114Q9Y508 228 aa12.77□□□□□ -0.37
SMAD3-201ENST00000327367 SCN10AQ9Y5Y9 1956 aa12.76□□□□□ -0.37
SMAD3-201ENST00000327367 ARHGAP21Q5T5U3 1957 aa12.76□□□□□ -0.37
SMAD3-201ENST00000327367 COX7A2LO14548 114 aa12.76□□□□□ -0.37
SMAD3-201ENST00000327367 CCDC179H3BU77 68 aa12.76□□□□□ -0.37
SMAD3-201ENST00000327367 ENHOQ6UWT2 76 aa12.76□□□□□ -0.37
SMAD3-201ENST00000327367 UQCRQO14949 82 aa12.76□□□□□ -0.37
SMAD3-201ENST00000327367 ABCA1O95477 2261 aa12.76□□□□□ -0.37
SMAD3-201ENST00000327367 COL5A3P25940 1745 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-201ENST00000327367 SLPIP03973 132 aa12.75□□□□□ -0.37
SMAD3-201ENST00000327367 TIRAPP58753 221 aa12.75□□□□□ -0.37
SMAD3-201ENST00000327367 RBX1P62877 108 aa12.75□□□□□ -0.37
SMAD3-201ENST00000327367 JMJD7-PLA2G4BH0Y9G9 81 aa12.75□□□□□ -0.37
SMAD3-201ENST00000327367 LINC00311Q8N616 119 aa12.75□□□□□ -0.37
SMAD3-201ENST00000327367 FAM240AA0A1B0GVK7 77 aa12.75□□□□□ -0.37
SMAD3-201ENST00000327367 WDR81Q562E7 1941 aa12.75□□□□□ -0.37
SMAD3-201ENST00000327367 NDUFC2-KCTD14E9PQ53 114 aa12.74□□□□□ -0.37
SMAD3-201ENST00000327367 ZNF503Q96F45 646 aa12.74□□□□□ -0.37
SMAD3-201ENST00000327367 DKK4Q9UBT3 224 aa12.74□□□□□ -0.37
SMAD3-201ENST00000327367 PLXND1Q9Y4D7 1925 aa12.74□□□□□ -0.37
SMAD3-201ENST00000327367 HOXB4P17483 251 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-201ENST00000327367 APOC4P55056 127 aa12.74□□□□□ -0.37
SMAD3-201ENST00000327367 SNURFQ9Y675 71 aa12.74□□□□□ -0.37
SMAD3-201ENST00000327367 EML6Q6ZMW3 1958 aa12.74□□□□□ -0.37
SMAD3-201ENST00000327367 DENND4AQ7Z401 1863 aa12.73□□□□□ -0.37
SMAD3-201ENST00000327367 IGKV4-1P06312 121 aa12.73□□□□□ -0.37
SMAD3-201ENST00000327367 CSRP1P21291 193 aaKnown RBP12.73□□□□□ -0.37
SMAD3-201ENST00000327367 C2orf70A6NJV1 201 aa12.73□□□□□ -0.37
SMAD3-201ENST00000327367 C16orf54Q6UWD8 224 aa12.73□□□□□ -0.37
SMAD3-201ENST00000327367 C17orf82Q86X59 251 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-201ENST00000327367 DAZ2Q13117 558 aaKnown RBP12.73□□□□□ -0.37
SMAD3-201ENST00000327367 DAZ4Q86SG3 579 aaKnown RBP12.73□□□□□ -0.37
SMAD3-201ENST00000327367 DAZ3Q9NR90 486 aaKnown RBP12.73□□□□□ -0.37
SMAD3-201ENST00000327367 THADAQ6YHU6 1953 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms