RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 SPTBN4Q9H254 2564 aa9.15□□□□□ -0.94
NCL-201ENST00000322723 LINC01549A6NIU2 74 aa9.15□□□□□ -0.94
NCL-201ENST00000322723 PRAC2D3DTV9 90 aa9.15□□□□□ -0.94
NCL-201ENST00000322723 FOXE3Q13461 319 aa9.15□□□□□ -0.94
NCL-201ENST00000322723 DLX4Q92988 240 aaPredicted RBP9.15□□□□□ -0.94
NCL-201ENST00000322723 IGHV4-4A0A075B6R2 117 aa9.15□□□□□ -0.94
NCL-201ENST00000322723 A0A096LNJ9 63 aa9.15□□□□□ -0.94
NCL-201ENST00000322723 MGPP08493 103 aa9.15□□□□□ -0.94
NCL-201ENST00000322723 C2orf91Q6ZV80 131 aa9.15□□□□□ -0.94
NCL-201ENST00000322723 CR1P17927 2039 aa9.15□□□□□ -0.95
NCL-201ENST00000322723 IGHV3OR16-13A0A075B7E8 117 aa9.15□□□□□ -0.95
NCL-201ENST00000322723 IGHV3-74A0A0B4J1X5 117 aa9.15□□□□□ -0.95
NCL-201ENST00000322723 NDUFA4O00483 81 aa9.15□□□□□ -0.95
NCL-201ENST00000322723 USMG5Q96IX5 58 aa9.15□□□□□ -0.95
NCL-201ENST00000322723 CHD8Q9HCK8 2581 aa9.14□□□□□ -0.95
NCL-201ENST00000322723 RPL11P62913 178 aaKnown RBP9.14□□□□□ -0.95
NCL-201ENST00000322723 SRSF1Q07955 248 aaKnown RBP eCLIP9.14□□□□□ -0.951e-9■■■■■ 30.4
NCL-201ENST00000322723 FAM104BQ5XKR9 115 aa9.14□□□□□ -0.95
NCL-201ENST00000322723 CLEC19AQ6UXS0 136 aa9.14□□□□□ -0.95
NCL-201ENST00000322723 IGLL5B9A064 214 aa9.14□□□□□ -0.95
NCL-201ENST00000322723 C12orf74Q32Q52 190 aa9.14□□□□□ -0.95
NCL-201ENST00000322723 RNF185Q96GF1 192 aa9.14□□□□□ -0.95
NCL-201ENST00000322723 LENEPQ9Y5L5 61 aa9.14□□□□□ -0.95
NCL-201ENST00000322723 TRBV25-1A0A075B6N4 114 aa9.14□□□□□ -0.95
NCL-201ENST00000322723 FOXI2Q6ZQN5 318 aa9.14□□□□□ -0.95
NCL-201ENST00000322723 NEGR1Q7Z3B1 354 aa9.14□□□□□ -0.95
NCL-201ENST00000322723 TMEM158Q8WZ71 300 aa9.14□□□□□ -0.95
NCL-201ENST00000322723 RAX2Q96IS3 184 aa9.14□□□□□ -0.95
NCL-201ENST00000322723 ZNF815PA8K554 130 aa9.13□□□□□ -0.95
NCL-201ENST00000322723 AVPP01185 164 aa9.13□□□□□ -0.95
NCL-201ENST00000322723 C9orf139Q6ZV77 190 aa9.13□□□□□ -0.95
NCL-201ENST00000322723 F5H697 171 aa9.13□□□□□ -0.95
NCL-201ENST00000322723 TMEM219Q86XT9 240 aa9.13□□□□□ -0.95
NCL-201ENST00000322723 CUBNO60494 3623 aa9.13□□□□□ -0.95
NCL-201ENST00000322723 UBR5O95071 2799 aaPredicted RBP9.13□□□□□ -0.95
NCL-201ENST00000322723 TMEM89A2RUT3 159 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 SLC25A16P16260 332 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 CEND1Q8N111 149 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 METTL26Q96S19 204 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 C1QTNF4Q9BXJ3 329 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 PKD1L2Q7Z442 2459 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 C2CD3Q4AC94 2353 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 GAGE12JA6NER3 117 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 GAGE7O76087 117 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 TSPAN13O95857 204 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 GAGE12FP0CL80 117 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 GAGE12GP0CL81 117 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 GAGE12IP0CL82 117 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 GAGE4Q13068 117 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 LGALS9BQ3B8N2 356 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 TMEM170BQ5T4T1 132 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 IGFL4Q6B9Z1 124 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 LGALS9CQ6DKI2 356 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 Q8TAT8 98 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 AGPAT4-IT1Q9H0P7 198 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 IGSF10Q6WRI0 2623 aa9.12□□□□□ -0.95
NCL-201ENST00000322723 IGKV3-7A0A075B6H7 116 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 IGHV7-4-1A0A0J9YVY3 117 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 TRBV7-9A0A0J9YWB2 115 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 C9JAW5 83 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 HERVK_113P61574 105 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 UFSP1Q6NVU6 142 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 BRD3OSQ6XYD6 125 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 SPANXB1Q9NS25 103 aaPredicted RBP9.11□□□□□ -0.95
NCL-201ENST00000322723 C11orf21Q9P2W6 132 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 IGKV3D-20A0A0C4DH25 116 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 J3QLI3 93 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 NPYP01303 97 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 TMEM95Q3KNT9 176 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 C20orf173Q96LM9 149 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 SCGB3A1Q96QR1 104 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 B4DSR2 109 aa9.11□□□□□ -0.95
NCL-201ENST00000322723 MRPL35Q9NZE8 188 aaKnown RBP9.1□□□□□ -0.95
NCL-201ENST00000322723 FBN2P35556 2912 aa9.1□□□□□ -0.95
NCL-201ENST00000322723 FABP5P3A8MUU1 101 aa9.1□□□□□ -0.95
NCL-201ENST00000322723 TMEM262E9PQX1 116 aa9.1□□□□□ -0.95
NCL-201ENST00000322723 ATP5J2P56134 94 aa9.1□□□□□ -0.95
NCL-201ENST00000322723 ERCC8Q13216 396 aa9.1□□□□□ -0.95
NCL-201ENST00000322723 MRPL51Q4U2R6 128 aaKnown RBP9.1□□□□□ -0.95
NCL-201ENST00000322723 IL17RELQ6ZVW7 336 aa9.1□□□□□ -0.95
NCL-201ENST00000322723 RNF182Q8N6D2 247 aa9.1□□□□□ -0.95
NCL-201ENST00000322723 ZNF256Q9Y2P7 627 aaPredicted RBP9.1□□□□□ -0.95
NCL-201ENST00000322723 ATP5LO75964 103 aa9.1□□□□□ -0.95
NCL-201ENST00000322723 TRBV12-3P01733 135 aa9.1□□□□□ -0.95
NCL-201ENST00000322723 UNQ9165/PRO28630Q6UXU0 137 aa9.1□□□□□ -0.95
NCL-201ENST00000322723 CELSR1Q9NYQ6 3014 aa9.09□□□□□ -0.95
NCL-201ENST00000322723 Q6ZS46 218 aa9.09□□□□□ -0.95
NCL-201ENST00000322723 IGHV3-49A0A0A0MS15 119 aa9.09□□□□□ -0.95
NCL-201ENST00000322723 K7EMT4 169 aa9.09□□□□□ -0.95
NCL-201ENST00000322723 HLA-DRB4P13762 266 aa9.09□□□□□ -0.95
NCL-201ENST00000322723 PSMB8P28062 276 aa9.09□□□□□ -0.95
NCL-201ENST00000322723 FOXI1Q12951 378 aa9.09□□□□□ -0.95
NCL-201ENST00000322723 HLA-DRB4X5D2U9 266 aa9.09□□□□□ -0.95
NCL-201ENST00000322723 H3BUX3 64 aa9.08□□□□□ -0.96
NCL-201ENST00000322723 TRGV3P03979 118 aa9.08□□□□□ -0.96
NCL-201ENST00000322723 C10orf126Q8N4M7 172 aa9.08□□□□□ -0.96
NCL-201ENST00000322723 PPDPFLQ8WWR9 84 aa9.08□□□□□ -0.96
NCL-201ENST00000322723 AKAP9Q99996 3911 aa9.08□□□□□ -0.96
NCL-201ENST00000322723 IGLV2-18A0A075B6J9 118 aa9.08□□□□□ -0.96
NCL-201ENST00000322723 IGHV3-64A0A075B6Q5 118 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms