RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 RNF5Q99942 180 aa7.38□□□□□ -1.23
PTPRA-202ENST00000318266 IGKV3-7A0A075B6H7 116 aa7.37□□□□□ -1.23
PTPRA-202ENST00000318266 DUSP14O95147 198 aaKnown RBP7.37□□□□□ -1.23
PTPRA-202ENST00000318266 ANKRD29Q8N6D5 301 aa7.37□□□□□ -1.23
PTPRA-202ENST00000318266 PPDPFLQ8WWR9 84 aa7.37□□□□□ -1.23
PTPRA-202ENST00000318266 TEN1Q86WV5 123 aa7.37□□□□□ -1.23
PTPRA-202ENST00000318266 BSNQ9UPA5 3926 aa7.37□□□□□ -1.23
PTPRA-202ENST00000318266 B5MCH6 92 aa7.37□□□□□ -1.23
PTPRA-202ENST00000318266 Q6ZS92 163 aa7.37□□□□□ -1.23
PTPRA-202ENST00000318266 TOMM6Q96B49 74 aa7.37□□□□□ -1.23
PTPRA-202ENST00000318266 TRAV12-1A0A0B4J245 112 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.36□□□□□ -1.23
PTPRA-202ENST00000318266 C11orf86A6NJI1 115 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 A8MWV9 139 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 UBE2D1P51668 147 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 SRSF2Q01130 221 aaKnown RBP7.36□□□□□ -1.23
PTPRA-202ENST00000318266 ORMDL2Q53FV1 153 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 TMEM170BQ5T4T1 132 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 NDUFA11Q86Y39 141 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 LINC01560Q8TB33 94 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 TRAV8-2A0A0B4J237 113 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 G3V318 75 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 SCGB2A1O75556 95 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 ZNF672Q499Z4 452 aaPredicted RBP7.36□□□□□ -1.23
PTPRA-202ENST00000318266 NPBQ8NG41 125 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 PHLDA3Q9Y5J5 127 aa7.36□□□□□ -1.23
PTPRA-202ENST00000318266 TRBV20-1A0A075B6N2 111 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 IGHV3-64A0A075B6Q5 118 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 CD7P09564 240 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 CRIP2P52943 208 aaPredicted RBP7.35□□□□□ -1.23
PTPRA-202ENST00000318266 SLC50A1Q9BRV3 221 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 C9JAW5 83 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 RPL39P62891 51 aaKnown RBP7.35□□□□□ -1.23
PTPRA-202ENST00000318266 TRPT1Q86TN4 253 aaKnown RBP7.35□□□□□ -1.23
PTPRA-202ENST00000318266 ATP6V0E2Q8NHE4 81 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 C16orf92Q96LL3 132 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 ERG28Q9UKR5 140 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 CELSR1Q9NYQ6 3014 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 IGHV7-81A0A0B4J1V7 117 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 ZNF688P0C7X2 276 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 TSPEAR-AS2P59090 65 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 UBE2D3P61077 147 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 UBE2D2P62837 147 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 OR11H6Q8NGC7 330 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 ZFAND3Q9H8U3 227 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 LINC00527Q9UJ94 153 aa7.35□□□□□ -1.23
PTPRA-202ENST00000318266 CFC1BP0CG36 223 aa7.34□□□□□ -1.23
PTPRA-202ENST00000318266 CFC1P0CG37 223 aa7.34□□□□□ -1.23
PTPRA-202ENST00000318266 TEX29Q8N6K0 151 aa7.34□□□□□ -1.23
PTPRA-202ENST00000318266 BEX4Q9NWD9 120 aaPredicted RBP7.34□□□□□ -1.23
PTPRA-202ENST00000318266 IGSF10Q6WRI0 2623 aa7.34□□□□□ -1.23
PTPRA-202ENST00000318266 A0A0J9YY99 117 aa7.34□□□□□ -1.23
PTPRA-202ENST00000318266 CLPSL1A2RUU4 121 aa7.34□□□□□ -1.23
PTPRA-202ENST00000318266 COX6B1P14854 86 aa7.34□□□□□ -1.23
PTPRA-202ENST00000318266 ZFAND6Q6FIF0 208 aa7.34□□□□□ -1.23
PTPRA-202ENST00000318266 C1orf122Q6ZSJ8 110 aa7.34□□□□□ -1.23
PTPRA-202ENST00000318266 TP53TG1Q9Y2A0 90 aa7.34□□□□□ -1.23
PTPRA-202ENST00000318266 COL12A1Q99715 3063 aa7.34□□□□□ -1.24
PTPRA-202ENST00000318266 SPTAN1Q13813 2472 aaKnown RBP7.33□□□□□ -1.24
PTPRA-202ENST00000318266 GNRH2O43555 120 aa7.33□□□□□ -1.24
PTPRA-202ENST00000318266 CD3EP07766 207 aa7.33□□□□□ -1.24
PTPRA-202ENST00000318266 RPL11P62913 178 aaKnown RBP7.33□□□□□ -1.24
PTPRA-202ENST00000318266 PRR30Q53SZ7 412 aaPredicted RBP7.33□□□□□ -1.24
PTPRA-202ENST00000318266 ZFHX3Q15911 3703 aa7.33□□□□□ -1.24
PTPRA-202ENST00000318266 MAP1AP78559 2803 aaPredicted RBP7.33□□□□□ -1.24
PTPRA-202ENST00000318266 B9A039 149 aa7.33□□□□□ -1.24
PTPRA-202ENST00000318266 F6UB75 175 aa7.33□□□□□ -1.24
PTPRA-202ENST00000318266 ATP6V0E1O15342 81 aa7.33□□□□□ -1.24
PTPRA-202ENST00000318266 CRYGDP07320 174 aa7.33□□□□□ -1.24
PTPRA-202ENST00000318266 VMO1Q7Z5L0 202 aa7.33□□□□□ -1.24
PTPRA-202ENST00000318266 RBAKDNA6NC62 111 aa7.33□□□□□ -1.24
PTPRA-202ENST00000318266 GRNP28799 593 aaKnown RBP7.33□□□□□ -1.24
PTPRA-202ENST00000318266 DPH3P1Q9H4G8 78 aa7.33□□□□□ -1.24
PTPRA-202ENST00000318266 JPT2Q9H910 190 aa7.33□□□□□ -1.24
PTPRA-202ENST00000318266 LINC01619G3V211 115 aa7.32□□□□□ -1.24
PTPRA-202ENST00000318266 RNASE4P34096 147 aaKnown RBP7.32□□□□□ -1.24
PTPRA-202ENST00000318266 Q1RN00 199 aa7.32□□□□□ -1.24
PTPRA-202ENST00000318266 LYRM7Q5U5X0 104 aa7.32□□□□□ -1.24
PTPRA-202ENST00000318266 AJUBAQ96IF1 538 aa7.32□□□□□ -1.24
PTPRA-202ENST00000318266 C20orf173Q96LM9 149 aa7.32□□□□□ -1.24
PTPRA-202ENST00000318266 CCDC140Q96MF4 163 aa7.32□□□□□ -1.24
PTPRA-202ENST00000318266 METTL26Q96S19 204 aa7.32□□□□□ -1.24
PTPRA-202ENST00000318266 F5H697 171 aa7.32□□□□□ -1.24
PTPRA-202ENST00000318266 SLC25A20O43772 301 aa7.32□□□□□ -1.24
PTPRA-202ENST00000318266 IGFL3Q6UXB1 125 aa7.32□□□□□ -1.24
PTPRA-202ENST00000318266 C10orf126Q8N4M7 172 aa7.32□□□□□ -1.24
PTPRA-202ENST00000318266 GCN1Q92616 2671 aaKnown RBP7.32□□□□□ -1.24
PTPRA-202ENST00000318266 A0A087WWL8 130 aa7.31□□□□□ -1.24
PTPRA-202ENST00000318266 TRAV2A0A0B4J234 112 aa7.31□□□□□ -1.24
PTPRA-202ENST00000318266 CRLF1O75462 422 aa7.31□□□□□ -1.24
PTPRA-202ENST00000318266 TSHBP01222 138 aa7.31□□□□□ -1.24
PTPRA-202ENST00000318266 IGHV4-39P01824 125 aa7.31□□□□□ -1.24
PTPRA-202ENST00000318266 HERVK_113P61574 105 aa7.31□□□□□ -1.24
PTPRA-202ENST00000318266 OPRPNQ99935 248 aaPredicted RBP7.31□□□□□ -1.24
PTPRA-202ENST00000318266 PRO1854Q9UHT4 67 aa7.31□□□□□ -1.24
PTPRA-202ENST00000318266 IGLV4-69A0A075B6H9 119 aa7.31□□□□□ -1.24
PTPRA-202ENST00000318266 TRAV4A0A0B4J268 109 aa7.31□□□□□ -1.24
PTPRA-202ENST00000318266 RNF223E7ERA6 249 aa7.31□□□□□ -1.24
PTPRA-202ENST00000318266 ASIPP42127 132 aa7.31□□□□□ -1.24
PTPRA-202ENST00000318266 MYO18BQ8IUG5 2567 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms