RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ITLN2Q8WWU7 325 aaPredicted RBP10.2□□□□□ -0.78
SKA3-202ENST00000314759 ZFAND2AQ8N6M9 145 aa10.2□□□□□ -0.78
SKA3-202ENST00000314759 C14orf178Q8N769 122 aaPredicted RBP10.2□□□□□ -0.78
SKA3-202ENST00000314759 CARD19Q96LW7 228 aa10.2□□□□□ -0.78
SKA3-202ENST00000314759 RNF223E7ERA6 249 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 K7ENP7 123 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 BAALCQ8WXS3 180 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 DLX4Q92988 240 aaPredicted RBP10.19□□□□□ -0.78
SKA3-202ENST00000314759 PRADC1Q9BSG0 188 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 CENPVL3A0A0U1RRI6 287 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 TSPAN13O95857 204 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 SLC25A16P16260 332 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 GATA3P23771 443 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 DEFB1P60022 68 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 C2orf66Q6UXQ4 117 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 KLHL30-AS1Q8NEE0 82 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 RAXQ9Y2V3 346 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 LENEPQ9Y5L5 61 aa10.19□□□□□ -0.78
SKA3-202ENST00000314759 ADORA2A-AS1P86434 159 aa10.18□□□□□ -0.78
SKA3-202ENST00000314759 Q6ZUT4 128 aa10.18□□□□□ -0.78
SKA3-202ENST00000314759 GPHB5Q86YW7 130 aa10.18□□□□□ -0.78
SKA3-202ENST00000314759 DPH3P1Q9H4G8 78 aa10.18□□□□□ -0.78
SKA3-202ENST00000314759 ZNF815PA8K554 130 aa10.17□□□□□ -0.78
SKA3-202ENST00000314759 S100A4P26447 101 aaKnown RBP10.17□□□□□ -0.78
SKA3-202ENST00000314759 C9orf139Q6ZV77 190 aa10.17□□□□□ -0.78
SKA3-202ENST00000314759 LINC00527Q9UJ94 153 aa10.17□□□□□ -0.78
SKA3-202ENST00000314759 PHLDA3Q9Y5J5 127 aa10.17□□□□□ -0.78
SKA3-202ENST00000314759 TGFAP01135 160 aa10.17□□□□□ -0.78
SKA3-202ENST00000314759 SRSF9Q13242 221 aaKnown RBP eCLIP10.17□□□□□ -0.78
SKA3-202ENST00000314759 ANXA2RQ3ZCQ2 193 aa10.17□□□□□ -0.78
SKA3-202ENST00000314759 SCGB1D4Q6XE38 83 aa10.17□□□□□ -0.78
SKA3-202ENST00000314759 C5orf56Q8N8D9 126 aa10.17□□□□□ -0.78
SKA3-202ENST00000314759 ATP6V0E2Q8NHE4 81 aa10.17□□□□□ -0.78
SKA3-202ENST00000314759 DEFB104AQ8WTQ1 72 aa10.17□□□□□ -0.78
SKA3-202ENST00000314759 LINC00477Q96M19 166 aa10.17□□□□□ -0.78
SKA3-202ENST00000314759 TRAV21A0A0B4J279 112 aa10.16□□□□□ -0.78
SKA3-202ENST00000314759 MGPP08493 103 aa10.16□□□□□ -0.78
SKA3-202ENST00000314759 NBL1P41271 181 aa10.16□□□□□ -0.78
SKA3-202ENST00000314759 UBE2D1P51668 147 aa10.16□□□□□ -0.78
SKA3-202ENST00000314759 UNQ9165/PRO28630Q6UXU0 137 aa10.16□□□□□ -0.78
SKA3-202ENST00000314759 AKAP6Q13023 2319 aa10.16□□□□□ -0.78
SKA3-202ENST00000314759 A0A1W2PPR1 153 aa10.16□□□□□ -0.78
SKA3-202ENST00000314759 ASIPP42127 132 aa10.16□□□□□ -0.78
SKA3-202ENST00000314759 TMEM219Q86XT9 240 aa10.16□□□□□ -0.78
SKA3-202ENST00000314759 RNF183Q96D59 192 aa10.16□□□□□ -0.78
SKA3-202ENST00000314759 OR10J6PQ8NGY7 276 aa10.15□□□□□ -0.78
SKA3-202ENST00000314759 TMEM238LA0A1B0GVL6 79 aa10.15□□□□□ -0.78
SKA3-202ENST00000314759 GNRH2O43555 120 aa10.15□□□□□ -0.78
SKA3-202ENST00000314759 COX6B1P14854 86 aa10.15□□□□□ -0.78
SKA3-202ENST00000314759 EMP1P54849 157 aa10.15□□□□□ -0.78
SKA3-202ENST00000314759 KIR2DL4Q99706 377 aa10.15□□□□□ -0.78
SKA3-202ENST00000314759 ATRXP46100 2492 aa10.15□□□□□ -0.78
SKA3-202ENST00000314759 MUC6Q6W4X9 2439 aa10.14□□□□□ -0.79
SKA3-202ENST00000314759 TRBV12-3P01733 135 aa10.14□□□□□ -0.79
SKA3-202ENST00000314759 UBE2D3P61077 147 aa10.14□□□□□ -0.79
SKA3-202ENST00000314759 UBE2D2P62837 147 aa10.14□□□□□ -0.79
SKA3-202ENST00000314759 TRAV41A0A0B4J266 112 aa10.14□□□□□ -0.79
SKA3-202ENST00000314759 SOCS3O14543 225 aa10.14□□□□□ -0.79
SKA3-202ENST00000314759 TCL1BO95988 128 aa10.14□□□□□ -0.79
SKA3-202ENST00000314759 CRYGDP07320 174 aa10.14□□□□□ -0.79
SKA3-202ENST00000314759 CD7P09564 240 aa10.14□□□□□ -0.79
SKA3-202ENST00000314759 RNASE4P34096 147 aaKnown RBP10.14□□□□□ -0.79
SKA3-202ENST00000314759 ARL3P36405 182 aa10.14□□□□□ -0.79
SKA3-202ENST00000314759 F6UB75 175 aa10.13□□□□□ -0.79
SKA3-202ENST00000314759 RNASE3P12724 160 aaKnown RBP10.13□□□□□ -0.79
SKA3-202ENST00000314759 OVOL1O14753 267 aa10.13□□□□□ -0.79
SKA3-202ENST00000314759 NPFFO15130 113 aa10.13□□□□□ -0.79
SKA3-202ENST00000314759 DUSP14O95147 198 aaKnown RBP10.13□□□□□ -0.79
SKA3-202ENST00000314759 FOXC1Q12948 553 aa10.13□□□□□ -0.79
SKA3-202ENST00000314759 C19orf54Q5BKX5 351 aa10.13□□□□□ -0.79
SKA3-202ENST00000314759 FAM19A4Q96LR4 140 aa10.13□□□□□ -0.79
SKA3-202ENST00000314759 CELSR1Q9NYQ6 3014 aa10.13□□□□□ -0.79
SKA3-202ENST00000314759 FAM223BA6NKX1 122 aa10.12□□□□□ -0.79
SKA3-202ENST00000314759 TSHBP01222 138 aa10.12□□□□□ -0.79
SKA3-202ENST00000314759 Q6ZS46 218 aa10.12□□□□□ -0.79
SKA3-202ENST00000314759 TEN1Q86WV5 123 aa10.12□□□□□ -0.79
SKA3-202ENST00000314759 NDUFA11Q86Y39 141 aa10.12□□□□□ -0.79
SKA3-202ENST00000314759 FAM223AQ8IWN6 122 aa10.12□□□□□ -0.79
SKA3-202ENST00000314759 PPDPFLQ8WWR9 84 aa10.12□□□□□ -0.79
SKA3-202ENST00000314759 MUC4Q99102 2169 aa10.12□□□□□ -0.79
SKA3-202ENST00000314759 A6NJY4 79 aa10.12□□□□□ -0.79
SKA3-202ENST00000314759 C11orf86A6NJI1 115 aa10.11□□□□□ -0.79
SKA3-202ENST00000314759 MED14OSP0DP75 135 aa10.11□□□□□ -0.79
SKA3-202ENST00000314759 LMO4P61968 165 aa10.11□□□□□ -0.79
SKA3-202ENST00000314759 IGLV4-69A0A075B6H9 119 aa10.11□□□□□ -0.79
SKA3-202ENST00000314759 LINC00315P59091 139 aa10.11□□□□□ -0.79
SKA3-202ENST00000314759 ERG28Q9UKR5 140 aa10.11□□□□□ -0.79
SKA3-202ENST00000314759 RPL11P62913 178 aaKnown RBP10.1□□□□□ -0.79
SKA3-202ENST00000314759 POM121L12Q8N7R1 296 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 KIF25-AS1Q9Y6Z4 181 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 IGKV3-7A0A075B6H7 116 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 A0A0J9YY99 117 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 PPP1R17O96001 155 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 BPESC1Q9GZL8 116 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 COL6A6A6NMZ7 2263 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 IGHV3OR16-10A0A075B7F0 116 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 IGIPA6NJ69 53 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 NDUFA4O00483 81 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 CFC1BP0CG36 223 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 CFC1P0CG37 223 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms