RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 EIF4EBP1Q13541 118 aaPredicted RBP6.96□□□□□ -1.3
COL6A5-202ENST00000312481 GPHB5Q86YW7 130 aa6.96□□□□□ -1.3
COL6A5-202ENST00000312481 C14orf178Q8N769 122 aaPredicted RBP6.96□□□□□ -1.3
COL6A5-202ENST00000312481 WDR86Q86TI4 376 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 MRPL35Q9NZE8 188 aaKnown RBP6.95□□□□□ -1.3
COL6A5-202ENST00000312481 K7ENP7 123 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 FOXL2P58012 376 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 RSPO3Q9BXY4 272 aaPredicted RBP6.95□□□□□ -1.3
COL6A5-202ENST00000312481 P0DMU3 169 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 FAM231AP0DMU4 169 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 FAM231CP0DMU5 169 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 MDFICQ9P1T7 246 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 LINC00158P58513 81 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 WI2-2373I1.2A0A1W2PRP0 233 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 MSMBP08118 114 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 PRSS57Q6UWY2 283 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 CHCHD5Q9BSY4 110 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 MSRB2Q9Y3D2 182 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 ZNF580Q9UK33 172 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 COL8A2P25067 703 aa6.95□□□□□ -1.3
COL6A5-202ENST00000312481 LOXL1Q08397 574 aaPredicted RBP6.95□□□□□ -1.3
COL6A5-202ENST00000312481 hADV29S1A0JD25 119 aa6.94□□□□□ -1.3
COL6A5-202ENST00000312481 TRAV4A0A0B4J268 109 aa6.94□□□□□ -1.3
COL6A5-202ENST00000312481 I3L2K1 104 aa6.94□□□□□ -1.3
COL6A5-202ENST00000312481 IGHV3-48P01763 117 aa6.94□□□□□ -1.3
COL6A5-202ENST00000312481 RBMY1FQ15415 496 aaKnown RBP6.94□□□□□ -1.3
COL6A5-202ENST00000312481 Q8N1Y9 231 aa6.94□□□□□ -1.3
COL6A5-202ENST00000312481 ORMDL1Q9P0S3 153 aa6.94□□□□□ -1.3
COL6A5-202ENST00000312481 IGKV3OR2-268A0A0C4DH90 116 aa6.94□□□□□ -1.3
COL6A5-202ENST00000312481 C11orf53Q8IXP5 236 aa6.94□□□□□ -1.3
COL6A5-202ENST00000312481 TSSC4Q9Y5U2 329 aaPredicted RBP6.94□□□□□ -1.3
COL6A5-202ENST00000312481 A0A1B0GX51 115 aa6.94□□□□□ -1.3
COL6A5-202ENST00000312481 TMEM256-PLSCR3K7ERE1 68 aa6.94□□□□□ -1.3
COL6A5-202ENST00000312481 MRGPRG-AS1Q2M3A8 158 aa6.94□□□□□ -1.3
COL6A5-202ENST00000312481 C15orf53Q8NAA6 179 aa6.94□□□□□ -1.3
COL6A5-202ENST00000312481 NDUFC2O95298 119 aa6.93□□□□□ -1.3
COL6A5-202ENST00000312481 Q6ZR03 302 aa6.93□□□□□ -1.3
COL6A5-202ENST00000312481 COLQQ9Y215 455 aaPredicted RBP6.93□□□□□ -1.3
COL6A5-202ENST00000312481 H3BTX0 84 aa6.93□□□□□ -1.3
COL6A5-202ENST00000312481 BRI3O95415 125 aa6.93□□□□□ -1.3
COL6A5-202ENST00000312481 BUB3O43684 328 aa6.93□□□□□ -1.3
COL6A5-202ENST00000312481 NSUN5P1Q3KNT7 163 aa6.93□□□□□ -1.3
COL6A5-202ENST00000312481 ETDBQ3ZM63 59 aa6.93□□□□□ -1.3
COL6A5-202ENST00000312481 Q6Q795 121 aa6.93□□□□□ -1.3
COL6A5-202ENST00000312481 PIP4P2Q8N4L2 257 aa6.93□□□□□ -1.3
COL6A5-202ENST00000312481 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
COL6A5-202ENST00000312481 ODF1Q14990 250 aa6.92□□□□□ -1.3
COL6A5-202ENST00000312481 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
COL6A5-202ENST00000312481 A6NNC1 897 aa6.92□□□□□ -1.3
COL6A5-202ENST00000312481 E7EQL1 145 aa6.92□□□□□ -1.3
COL6A5-202ENST00000312481 IGKV1-17P01599 117 aa6.92□□□□□ -1.3
COL6A5-202ENST00000312481 A0A0J9YX75 114 aa6.92□□□□□ -1.3
COL6A5-202ENST00000312481 GAGE2AQ6NT46 116 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 COX8CQ7Z4L0 72 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 UBE2E2Q96LR5 201 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 K7EIM0 57 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 FAM201AQ5SY85 155 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 FAM222AQ5U5X8 452 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 C16orf74Q96GX8 76 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 SNAI2O43623 268 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 FUSP35637 526 aaKnown RBP eCLIP6.91□□□□□ -1.3
COL6A5-202ENST00000312481 LINC01560Q8TB33 94 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 CDK2AP2O75956 126 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 TOMM7Q9P0U1 55 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 TGFAP01135 160 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 INSL3P51460 131 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 IGLL5B9A064 214 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 GTSF1Q8WW33 167 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 MBD6Q96DN6 1003 aa6.91□□□□□ -1.3
COL6A5-202ENST00000312481 IGLV1-47P01700 117 aa6.9□□□□□ -1.3
COL6A5-202ENST00000312481 TRBV10-2A0A0K0K1G8 114 aa6.9□□□□□ -1.3
COL6A5-202ENST00000312481 IGLV2-14P01704 120 aa6.9□□□□□ -1.3
COL6A5-202ENST00000312481 NPC2P61916 151 aa6.9□□□□□ -1.3
COL6A5-202ENST00000312481 MRPS36P82909 103 aaKnown RBP6.9□□□□□ -1.3
COL6A5-202ENST00000312481 VPREB3Q9UKI3 123 aa6.9□□□□□ -1.3
COL6A5-202ENST00000312481 H3BUX3 64 aa6.9□□□□□ -1.3
COL6A5-202ENST00000312481 TINCRA0A1B0GVN0 87 aa6.9□□□□□ -1.31
COL6A5-202ENST00000312481 C2orf70A6NJV1 201 aa6.9□□□□□ -1.31
COL6A5-202ENST00000312481 IGHV4-4A0A075B6R2 117 aa6.9□□□□□ -1.31
COL6A5-202ENST00000312481 TRGV1A0A0A0MS02 117 aa6.9□□□□□ -1.31
COL6A5-202ENST00000312481 ATP6V0E1O15342 81 aa6.9□□□□□ -1.31
COL6A5-202ENST00000312481 PYGO1Q9Y3Y4 419 aa6.9□□□□□ -1.31
COL6A5-202ENST00000312481 FOXI1Q12951 378 aa6.9□□□□□ -1.31
COL6A5-202ENST00000312481 C1orf159Q96HA4 380 aa6.9□□□□□ -1.31
COL6A5-202ENST00000312481 PRSS29PA6NIE9 313 aa6.89□□□□□ -1.31
COL6A5-202ENST00000312481 UQCRQO14949 82 aa6.89□□□□□ -1.31
COL6A5-202ENST00000312481 CGB3P0DN86 165 aa6.89□□□□□ -1.31
COL6A5-202ENST00000312481 CGB7P0DN87 165 aa6.89□□□□□ -1.31
COL6A5-202ENST00000312481 DAZAP2Q15038 168 aaPredicted RBP6.89□□□□□ -1.31
COL6A5-202ENST00000312481 LY6EQ16553 131 aa6.89□□□□□ -1.31
COL6A5-202ENST00000312481 CFHR4Q92496 578 aa6.89□□□□□ -1.31
COL6A5-202ENST00000312481 C10orf55Q5SWW7 151 aa6.89□□□□□ -1.31
COL6A5-202ENST00000312481 TRBV7-3A0A075B6L6 115 aa6.89□□□□□ -1.31
COL6A5-202ENST00000312481 TRAV12-3A0A0B4J271 114 aa6.89□□□□□ -1.31
COL6A5-202ENST00000312481 TMEM105Q8N8V8 129 aa6.89□□□□□ -1.31
COL6A5-202ENST00000312481 C10orf142B7Z368 130 aa6.89□□□□□ -1.31
COL6A5-202ENST00000312481 ICOSQ9Y6W8 199 aa6.89□□□□□ -1.31
COL6A5-202ENST00000312481 EGR2P11161 476 aaPredicted RBP6.88□□□□□ -1.31
COL6A5-202ENST00000312481 LINC01620Q4KN68 170 aa6.88□□□□□ -1.31
COL6A5-202ENST00000312481 LGALS9O00182 355 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms