RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 BPESC1Q9GZL8 116 aa10.69□□□□□ -0.7
TRIM56-201ENST00000306085 FNDC1Q4ZHG4 1894 aaPredicted RBP10.69□□□□□ -0.7
TRIM56-201ENST00000306085 ZFP36L1Q07352 338 aaKnown RBP10.69□□□□□ -0.7
TRIM56-201ENST00000306085 CSRP2Q16527 193 aa10.69□□□□□ -0.7
TRIM56-201ENST00000306085 TM2D2Q9BX73 214 aa10.69□□□□□ -0.7
TRIM56-201ENST00000306085 SPACA3Q8IXA5 215 aa10.68□□□□□ -0.7
TRIM56-201ENST00000306085 LYPD2Q6UXB3 125 aa10.68□□□□□ -0.7
TRIM56-201ENST00000306085 MRPL53Q96EL3 112 aaKnown RBP10.68□□□□□ -0.7
TRIM56-201ENST00000306085 GNLYP22749 145 aa10.68□□□□□ -0.7
TRIM56-201ENST00000306085 WFDC11Q8NEX6 87 aa10.68□□□□□ -0.7
TRIM56-201ENST00000306085 UPK3BQ9BT76 320 aa10.68□□□□□ -0.7
TRIM56-201ENST00000306085 SETD2Q9BYW2 2564 aaPredicted RBP10.68□□□□□ -0.7
TRIM56-201ENST00000306085 FAM240AA0A1B0GVK7 77 aa10.68□□□□□ -0.7
TRIM56-201ENST00000306085 ADCYAP1P18509 176 aa10.68□□□□□ -0.7
TRIM56-201ENST00000306085 Q8NFD4 153 aa10.68□□□□□ -0.7
TRIM56-201ENST00000306085 LINC00114Q6XXX2 140 aa10.68□□□□□ -0.7
TRIM56-201ENST00000306085 ZNRD1Q9P1U0 126 aa10.68□□□□□ -0.7
TRIM56-201ENST00000306085 COX7A2LO14548 114 aa10.67□□□□□ -0.7
TRIM56-201ENST00000306085 ANKHD1Q8IWZ3 2542 aaKnown RBP10.67□□□□□ -0.7
TRIM56-201ENST00000306085 IGHV2-70DA0A0C4DH43 119 aa10.67□□□□□ -0.7
TRIM56-201ENST00000306085 RNASE8Q8TDE3 154 aaKnown RBP10.67□□□□□ -0.7
TRIM56-201ENST00000306085 ZSWIM8A7E2V4 1837 aa10.67□□□□□ -0.7
TRIM56-201ENST00000306085 PINLYPA6NC86 204 aa10.67□□□□□ -0.7
TRIM56-201ENST00000306085 G3V318 75 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 MESP1Q9BRJ9 268 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 C20orf78Q9BR46 151 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 TMEM14BQ9NUH8 114 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 IGHV3-33P01772 117 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 IGHV3-30-3P0DP02 117 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 H0YGX0 51 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 PRR25Q96S07 402 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 TRBV10-2A0A0K0K1G8 114 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 GYPEP15421 78 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 COL8A2P25067 703 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 LHFPL1Q86WI0 220 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 ARTNQ5T4W7 220 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 LGALS9O00182 355 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 V9GYV3 84 aa10.66□□□□□ -0.7
TRIM56-201ENST00000306085 IGKV2D-26A0A0A0MRZ7 120 aa10.65□□□□□ -0.7
TRIM56-201ENST00000306085 FOXI2Q6ZQN5 318 aa10.65□□□□□ -0.7
TRIM56-201ENST00000306085 TEN1Q86WV5 123 aa10.65□□□□□ -0.7
TRIM56-201ENST00000306085 A6NED7 52 aa10.65□□□□□ -0.7
TRIM56-201ENST00000306085 CLEC2BQ92478 149 aa10.65□□□□□ -0.7
TRIM56-201ENST00000306085 A0A0G2JNJ9 132 aa10.65□□□□□ -0.7
TRIM56-201ENST00000306085 Q9UFV3 132 aa10.65□□□□□ -0.7
TRIM56-201ENST00000306085 ALPK3Q96L96 1907 aa10.65□□□□□ -0.7
TRIM56-201ENST00000306085 FOXI1Q12951 378 aa10.65□□□□□ -0.7
TRIM56-201ENST00000306085 LINC01545Q5VT33 79 aa10.65□□□□□ -0.7
TRIM56-201ENST00000306085 IGKV1D-17A0A075B6S4 117 aa10.64□□□□□ -0.71
TRIM56-201ENST00000306085 WISP1O95388 367 aa10.64□□□□□ -0.71
TRIM56-201ENST00000306085 WI2-2373I1.2A0A1W2PRP0 233 aa10.64□□□□□ -0.71
TRIM56-201ENST00000306085 NRXN2Q9P2S2 1712 aa10.64□□□□□ -0.71
TRIM56-201ENST00000306085 PYGO2Q9BRQ0 406 aa10.64□□□□□ -0.71
TRIM56-201ENST00000306085 EPOPA6NHQ4 379 aa10.64□□□□□ -0.71
TRIM56-201ENST00000306085 A0A0J9YWU9 116 aa10.63□□□□□ -0.71
TRIM56-201ENST00000306085 GNRH2O43555 120 aa10.63□□□□□ -0.71
TRIM56-201ENST00000306085 CTSGP08311 255 aa10.63□□□□□ -0.71
TRIM56-201ENST00000306085 RNF152Q8N8N0 203 aa10.63□□□□□ -0.71
TRIM56-201ENST00000306085 Q6P435 159 aa10.63□□□□□ -0.71
TRIM56-201ENST00000306085 FANCD2OSQ96PS1 177 aa10.63□□□□□ -0.71
TRIM56-201ENST00000306085 CRYGSP22914 178 aa10.63□□□□□ -0.71
TRIM56-201ENST00000306085 PRR4Q16378 134 aa10.63□□□□□ -0.71
TRIM56-201ENST00000306085 IGHV2-5P01817 119 aa10.63□□□□□ -0.71
TRIM56-201ENST00000306085 NDUFC2-KCTD14E9PQ53 114 aa10.62□□□□□ -0.71
TRIM56-201ENST00000306085 J3QRE1 110 aa10.62□□□□□ -0.71
TRIM56-201ENST00000306085 YPEL3P61236 119 aaPredicted RBP10.62□□□□□ -0.71
TRIM56-201ENST00000306085 C17orf77Q96MU5 243 aa10.62□□□□□ -0.71
TRIM56-201ENST00000306085 ZFYVE26Q68DK2 2539 aa10.62□□□□□ -0.71
TRIM56-201ENST00000306085 LECT2O14960 151 aa10.62□□□□□ -0.71
TRIM56-201ENST00000306085 NPBQ8NG41 125 aa10.62□□□□□ -0.71
TRIM56-201ENST00000306085 PNRC2Q9NPJ4 139 aaKnown RBP10.62□□□□□ -0.71
TRIM56-201ENST00000306085 ZNF581Q9P0T4 197 aa10.62□□□□□ -0.71
TRIM56-201ENST00000306085 RBAKDNA6NC62 111 aa10.62□□□□□ -0.71
TRIM56-201ENST00000306085 IGLC1P0CG04 106 aa10.62□□□□□ -0.71
TRIM56-201ENST00000306085 A4D1N5 150 aa10.62□□□□□ -0.71
TRIM56-201ENST00000306085 MSMBP08118 114 aa10.62□□□□□ -0.71
TRIM56-201ENST00000306085 IGLV3-9A0A075B6K5 115 aa10.61□□□□□ -0.71
TRIM56-201ENST00000306085 A0A0G2JRQ6 117 aa10.61□□□□□ -0.71
TRIM56-201ENST00000306085 Q96MF0 132 aa10.61□□□□□ -0.71
TRIM56-201ENST00000306085 WFDC10BQ8IUB3 73 aa10.61□□□□□ -0.71
TRIM56-201ENST00000306085 RPL39LQ96EH5 51 aaKnown RBP10.61□□□□□ -0.71
TRIM56-201ENST00000306085 ZNF883P0CG24 379 aa10.61□□□□□ -0.71
TRIM56-201ENST00000306085 C9JQL5 133 aa10.61□□□□□ -0.71
TRIM56-201ENST00000306085 HOXB4P17483 251 aaPredicted RBP10.61□□□□□ -0.71
TRIM56-201ENST00000306085 NDUFA4O00483 81 aa10.61□□□□□ -0.71
TRIM56-201ENST00000306085 GGNQ86UU5 652 aa10.61□□□□□ -0.71
TRIM56-201ENST00000306085 COL11A2P13942 1736 aaPredicted RBP10.61□□□□□ -0.71
TRIM56-201ENST00000306085 LRCOL1A6NCL2 159 aa10.61□□□□□ -0.71
TRIM56-201ENST00000306085 TMEM256-PLSCR3K7ERE1 68 aa10.61□□□□□ -0.71
TRIM56-201ENST00000306085 WFDC2Q14508 124 aa10.61□□□□□ -0.71
TRIM56-201ENST00000306085 FAM236DA0A1B0GTK5 79 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 G3V4G9 280 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 FAM236CP0DP71 79 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 Q6ZUT4 128 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 NDUFA4L2Q9NRX3 87 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 B9D2Q9BPU9 175 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 CEP192Q8TEP8 1941 aa10.6□□□□□ -0.71
TRIM56-201ENST00000306085 MST1P26927 711 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms