RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 MED14OSP0DP75 135 aa19.35■□□□□ 0.69
HDAC3-201ENST00000305264 SVBPQ8N300 66 aa19.35■□□□□ 0.69
HDAC3-201ENST00000305264 SSBP4Q9BWG4 385 aaPredicted RBP19.35■□□□□ 0.69
HDAC3-201ENST00000305264 TRGV1A0A0A0MS02 117 aa19.35■□□□□ 0.69
HDAC3-201ENST00000305264 MUC21A0A0G2JKD1 596 aa19.35■□□□□ 0.69
HDAC3-201ENST00000305264 MUC21A0A140T8X8 626 aa19.35■□□□□ 0.69
HDAC3-201ENST00000305264 SNAI2O43623 268 aa19.35■□□□□ 0.69
HDAC3-201ENST00000305264 LYRM9A8MSI8 78 aa19.34■□□□□ 0.69
HDAC3-201ENST00000305264 PPP1R2P9O14990 202 aa19.34■□□□□ 0.69
HDAC3-201ENST00000305264 OR5AL1P0C617 328 aa19.34■□□□□ 0.69
HDAC3-201ENST00000305264 OR10AG1Q8NH19 301 aa19.34■□□□□ 0.69
HDAC3-201ENST00000305264 ANAPC16Q96DE5 110 aa19.34■□□□□ 0.69
HDAC3-201ENST00000305264 M0R2P5 195 aa19.33■□□□□ 0.69
HDAC3-201ENST00000305264 EDA2RQ9HAV5 297 aa19.33■□□□□ 0.69
HDAC3-201ENST00000305264 PHLDA3Q9Y5J5 127 aa19.33■□□□□ 0.69
HDAC3-201ENST00000305264 C7orf77A4D0Y5 90 aa19.33■□□□□ 0.68
HDAC3-201ENST00000305264 SPART-AS1P0CW21 52 aa19.33■□□□□ 0.68
HDAC3-201ENST00000305264 LYZL1Q6UWQ5 148 aa19.33■□□□□ 0.68
HDAC3-201ENST00000305264 A0A1W2PPQ1 181 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 GFRA4Q9GZZ7 299 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 GAGE12BA1L429 117 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 HIGD1CA8MV81 97 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 GAGE7O76087 117 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 GAGE12FP0CL80 117 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 GAGE12GP0CL81 117 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 GAGE12IP0CL82 117 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 DEFB130BP0DP73 79 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 DEFB130AP0DP74 79 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 CTRLP40313 264 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 RHEBQ15382 184 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 ZNF876PQ49A33 203 aa19.32■□□□□ 0.68
HDAC3-201ENST00000305264 SNAPINO95295 136 aa19.31■□□□□ 0.68
HDAC3-201ENST00000305264 SSTP61278 116 aa19.31■□□□□ 0.68
HDAC3-201ENST00000305264 LGALS9BQ3B8N2 356 aa19.31■□□□□ 0.68
HDAC3-201ENST00000305264 LINC00612Q8N6U2 182 aa19.31■□□□□ 0.68
HDAC3-201ENST00000305264 CXorf65A6NEN9 183 aa19.3■□□□□ 0.68
HDAC3-201ENST00000305264 M0R381 172 aa19.3■□□□□ 0.68
HDAC3-201ENST00000305264 DMRTA1Q5VZB9 504 aa19.3■□□□□ 0.68
HDAC3-201ENST00000305264 RASL10AQ92737 203 aa19.3■□□□□ 0.68
HDAC3-201ENST00000305264 PGLYRP4Q96LB8 373 aa19.3■□□□□ 0.68
HDAC3-201ENST00000305264 SMIM27A0A1W2PRY6 76 aa19.3■□□□□ 0.68
HDAC3-201ENST00000305264 FAM231BA6NCW3 169 aa19.29■□□□□ 0.68
HDAC3-201ENST00000305264 FOXA3P55318 350 aaPredicted RBP19.29■□□□□ 0.68
HDAC3-201ENST00000305264 C11orf45Q8TAV5 145 aa19.29■□□□□ 0.68
HDAC3-201ENST00000305264 RPS10P5Q9NQ39 176 aa19.29■□□□□ 0.68
HDAC3-201ENST00000305264 TEX48A0A1B0GUV7 120 aa19.28■□□□□ 0.68
HDAC3-201ENST00000305264 F2Z2F3 143 aa19.28■□□□□ 0.68
HDAC3-201ENST00000305264 NANOS2P60321 138 aaKnown RBP19.28■□□□□ 0.68
HDAC3-201ENST00000305264 C12orf74Q32Q52 190 aa19.28■□□□□ 0.68
HDAC3-201ENST00000305264 ZFP82Q8N141 532 aa19.28■□□□□ 0.68
HDAC3-201ENST00000305264 NUP35Q8NFH5 326 aa19.28■□□□□ 0.68
HDAC3-201ENST00000305264 CTDSP1Q9GZU7 261 aa19.28■□□□□ 0.68
HDAC3-201ENST00000305264 NXPH4O95158 308 aa19.27■□□□□ 0.68
HDAC3-201ENST00000305264 DAD1P61803 113 aa19.27■□□□□ 0.68
HDAC3-201ENST00000305264 SPANXN1Q5VSR9 72 aa19.27■□□□□ 0.68
HDAC3-201ENST00000305264 ATRAIDQ6UW56 229 aa19.27■□□□□ 0.68
HDAC3-201ENST00000305264 PTH2Q96A98 100 aa19.27■□□□□ 0.68
HDAC3-201ENST00000305264 NAT8BQ9UHF3 227 aa19.27■□□□□ 0.68
HDAC3-201ENST00000305264 A0A087WWC5 75 aa19.26■□□□□ 0.67
HDAC3-201ENST00000305264 SYT8Q8NBV8 401 aa19.26■□□□□ 0.67
HDAC3-201ENST00000305264 CNFNQ9BYD5 112 aa19.26■□□□□ 0.67
HDAC3-201ENST00000305264 NACAE9PAV3 2078 aa19.25■□□□□ 0.67
HDAC3-201ENST00000305264 TRGV2A0A075B6R0 118 aa19.25■□□□□ 0.67
HDAC3-201ENST00000305264 MSRB1Q9NZV6 116 aa19.25■□□□□ 0.67
HDAC3-201ENST00000305264 ATP6V1G1O75348 118 aa19.24■□□□□ 0.67
HDAC3-201ENST00000305264 JPT2Q9H910 190 aa19.24■□□□□ 0.67
HDAC3-201ENST00000305264 DNAH7Q8WXX0 4024 aa19.24■□□□□ 0.67
HDAC3-201ENST00000305264 Q6ZTC4 211 aa19.24■□□□□ 0.67
HDAC3-201ENST00000305264 FAM3BP58499 235 aaPredicted RBP19.23■□□□□ 0.67
HDAC3-201ENST00000305264 CACNG7P62955 275 aa19.23■□□□□ 0.67
HDAC3-201ENST00000305264 NTF3P20783 257 aa19.23■□□□□ 0.67
HDAC3-201ENST00000305264 PIK3CD-AS1Q5SR53 167 aa19.23■□□□□ 0.67
HDAC3-201ENST00000305264 POM121L12Q8N7R1 296 aa19.23■□□□□ 0.67
HDAC3-201ENST00000305264 TMEM242Q9NWH2 141 aa19.23■□□□□ 0.67
HDAC3-201ENST00000305264 IGHV4-4A0A075B6R2 117 aa19.22■□□□□ 0.67
HDAC3-201ENST00000305264 C18orf15Q96N68 181 aa19.21■□□□□ 0.67
HDAC3-201ENST00000305264 NDUFAF3Q9BU61 184 aa19.21■□□□□ 0.67
HDAC3-201ENST00000305264 A0A1B0GUT8 65 aa19.21■□□□□ 0.67
HDAC3-201ENST00000305264 IGHV3-53P01767 116 aa19.21■□□□□ 0.67
HDAC3-201ENST00000305264 CFAP126Q5VTH2 177 aa19.2■□□□□ 0.66
HDAC3-201ENST00000305264 WDR73Q6P4I2 378 aa19.2■□□□□ 0.66
HDAC3-201ENST00000305264 TWIST1Q15672 202 aa19.19■□□□□ 0.66
HDAC3-201ENST00000305264 BORCS7Q96B45 105 aa19.19■□□□□ 0.66
HDAC3-201ENST00000305264 SAMD10Q9BYL1 202 aa19.19■□□□□ 0.66
HDAC3-201ENST00000305264 ZNF479Q96JC4 524 aa19.19■□□□□ 0.66
HDAC3-201ENST00000305264 IMMP2LQ96T52 175 aa19.19■□□□□ 0.66
HDAC3-201ENST00000305264 TRAV4A0A0B4J268 109 aa19.18■□□□□ 0.66
HDAC3-201ENST00000305264 RS1O15537 224 aa19.18■□□□□ 0.66
HDAC3-201ENST00000305264 OR4C5Q8NGB2 326 aa19.18■□□□□ 0.66
HDAC3-201ENST00000305264 URGCP-MRPS24S4R325 110 aa19.18■□□□□ 0.66
HDAC3-201ENST00000305264 A8MWV9 139 aa19.17■□□□□ 0.66
HDAC3-201ENST00000305264 A0A087WWL8 130 aa19.17■□□□□ 0.66
HDAC3-201ENST00000305264 MRPL54Q6P161 138 aaKnown RBP19.17■□□□□ 0.66
HDAC3-201ENST00000305264 AP1S3Q96PC3 154 aa19.17■□□□□ 0.66
HDAC3-201ENST00000305264 ATP5G1P05496 136 aa19.16■□□□□ 0.66
HDAC3-201ENST00000305264 HTN3P15516 51 aa19.16■□□□□ 0.66
HDAC3-201ENST00000305264 FAM74A4Q5TZK3 123 aa19.15■□□□□ 0.66
HDAC3-201ENST00000305264 KCNIP4Q6PIL6 250 aa19.15■□□□□ 0.66
HDAC3-201ENST00000305264 IGHV3-73A0A0B4J1V6 119 aa19.15■□□□□ 0.66
HDAC3-201ENST00000305264 CRYGDP07320 174 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms