RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CRIP2P52943 208 aaPredicted RBP9.77□□□□□ -0.85
HIF3A-204ENST00000300862 RPL24P83731 157 aaKnown RBP9.77□□□□□ -0.85
HIF3A-204ENST00000300862 OR10J6PQ8NGY7 276 aa9.77□□□□□ -0.85
HIF3A-204ENST00000300862 SOCS3O14543 225 aa9.76□□□□□ -0.85
HIF3A-204ENST00000300862 IGHG2P01859 326 aa9.76□□□□□ -0.85
HIF3A-204ENST00000300862 GTSCR1Q86UQ5 136 aa9.76□□□□□ -0.85
HIF3A-204ENST00000300862 A6NDX4 124 aa9.76□□□□□ -0.85
HIF3A-204ENST00000300862 K7EMI3 77 aa9.76□□□□□ -0.85
HIF3A-204ENST00000300862 S100A4P26447 101 aaKnown RBP9.76□□□□□ -0.85
HIF3A-204ENST00000300862 SAMD13Q5VXD3 122 aa9.76□□□□□ -0.85
HIF3A-204ENST00000300862 GNRH2O43555 120 aa9.75□□□□□ -0.85
HIF3A-204ENST00000300862 ANXA2RQ3ZCQ2 193 aa9.75□□□□□ -0.85
HIF3A-204ENST00000300862 C14orf178Q8N769 122 aaPredicted RBP9.75□□□□□ -0.85
HIF3A-204ENST00000300862 RHPN1-AS1Q9BWJ2 59 aa9.75□□□□□ -0.85
HIF3A-204ENST00000300862 TMEM160Q9NX00 188 aa9.75□□□□□ -0.85
HIF3A-204ENST00000300862 TRBV25-1A0A075B6N4 114 aa9.75□□□□□ -0.85
HIF3A-204ENST00000300862 TMEM8BA6NDV4 472 aa9.75□□□□□ -0.85
HIF3A-204ENST00000300862 MSMBP08118 114 aa9.75□□□□□ -0.85
HIF3A-204ENST00000300862 LAGE3Q14657 143 aa9.75□□□□□ -0.85
HIF3A-204ENST00000300862 LINC00477Q96M19 166 aa9.75□□□□□ -0.85
HIF3A-204ENST00000300862 PGPEP1Q9NXJ5 209 aa9.75□□□□□ -0.85
HIF3A-204ENST00000300862 DEFB104AQ8WTQ1 72 aa9.74□□□□□ -0.85
HIF3A-204ENST00000300862 NHP2Q9NX24 153 aaKnown RBP9.74□□□□□ -0.85
HIF3A-204ENST00000300862 IGKCP01834 107 aa9.74□□□□□ -0.85
HIF3A-204ENST00000300862 SCGB1A1P11684 91 aa9.74□□□□□ -0.85
HIF3A-204ENST00000300862 ZC2HC1BQ5TFG8 222 aa9.74□□□□□ -0.85
HIF3A-204ENST00000300862 C10orf99Q6UWK7 81 aa9.74□□□□□ -0.85
HIF3A-204ENST00000300862 RPL39LQ96EH5 51 aaKnown RBP9.74□□□□□ -0.85
HIF3A-204ENST00000300862 MRPL35Q9NZE8 188 aaKnown RBP9.74□□□□□ -0.85
HIF3A-204ENST00000300862 IGHV4-4A0A075B6R2 117 aa9.73□□□□□ -0.85
HIF3A-204ENST00000300862 TRAV21A0A0B4J279 112 aa9.73□□□□□ -0.85
HIF3A-204ENST00000300862 USMG5Q96IX5 58 aa9.73□□□□□ -0.85
HIF3A-204ENST00000300862 GTSF1LQ9H1H1 148 aa9.73□□□□□ -0.85
HIF3A-204ENST00000300862 OVOL1O14753 267 aa9.73□□□□□ -0.85
HIF3A-204ENST00000300862 MGPP08493 103 aa9.73□□□□□ -0.85
HIF3A-204ENST00000300862 AZU1P20160 251 aa9.73□□□□□ -0.85
HIF3A-204ENST00000300862 TM2D2Q9BX73 214 aa9.73□□□□□ -0.85
HIF3A-204ENST00000300862 PHLDA3Q9Y5J5 127 aa9.73□□□□□ -0.85
HIF3A-204ENST00000300862 CEND1Q8N111 149 aa9.72□□□□□ -0.85
HIF3A-204ENST00000300862 MYOZ3Q8TDC0 251 aa9.72□□□□□ -0.85
HIF3A-204ENST00000300862 LRRK2Q5S007 2527 aa9.72□□□□□ -0.85
HIF3A-204ENST00000300862 DPM2O94777 84 aa9.72□□□□□ -0.85
HIF3A-204ENST00000300862 ASIPP42127 132 aa9.72□□□□□ -0.85
HIF3A-204ENST00000300862 MAPK1IP1LQ8NDC0 245 aa9.72□□□□□ -0.85
HIF3A-204ENST00000300862 RASL10AQ92737 203 aa9.72□□□□□ -0.85
HIF3A-204ENST00000300862 SPANXB1Q9NS25 103 aaPredicted RBP9.72□□□□□ -0.85
HIF3A-204ENST00000300862 LENEPQ9Y5L5 61 aa9.72□□□□□ -0.85
HIF3A-204ENST00000300862 MUC4Q99102 2169 aa9.72□□□□□ -0.85
HIF3A-204ENST00000300862 E9PLD3 99 aa9.71□□□□□ -0.85
HIF3A-204ENST00000300862 SRSF1Q07955 248 aaKnown RBP eCLIP9.71□□□□□ -0.85
HIF3A-204ENST00000300862 WFDC2Q14508 124 aa9.71□□□□□ -0.85
HIF3A-204ENST00000300862 SMIM2Q9BVW6 85 aa9.71□□□□□ -0.85
HIF3A-204ENST00000300862 ANKRD17O75179 2603 aaKnown RBP9.71□□□□□ -0.85
HIF3A-204ENST00000300862 ATP5LO75964 103 aa9.71□□□□□ -0.86
HIF3A-204ENST00000300862 CRYBA4P53673 196 aa9.71□□□□□ -0.86
HIF3A-204ENST00000300862 SMAGPQ0VAQ4 97 aa9.71□□□□□ -0.86
HIF3A-204ENST00000300862 MAPKAPK5-AS1Q8N8E1 139 aa9.71□□□□□ -0.86
HIF3A-204ENST00000300862 DAZ1Q9NQZ3 744 aaKnown RBP9.71□□□□□ -0.86
HIF3A-204ENST00000300862 TSSC4Q9Y5U2 329 aaPredicted RBP9.71□□□□□ -0.86
HIF3A-204ENST00000300862 FBN2P35556 2912 aa9.71□□□□□ -0.86
HIF3A-204ENST00000300862 IGLL5B9A064 214 aa9.7□□□□□ -0.86
HIF3A-204ENST00000300862 IGLV1-40P01703 118 aa9.7□□□□□ -0.86
HIF3A-204ENST00000300862 IGHV4-59P01825 116 aa9.7□□□□□ -0.86
HIF3A-204ENST00000300862 PTPN13Q12923 2485 aa9.7□□□□□ -0.86
HIF3A-204ENST00000300862 RNASE3P12724 160 aaKnown RBP9.7□□□□□ -0.86
HIF3A-204ENST00000300862 PSMG4Q5JS54 123 aa9.7□□□□□ -0.86
HIF3A-204ENST00000300862 MRAP2Q96G30 205 aa9.7□□□□□ -0.86
HIF3A-204ENST00000300862 MXRA5Q9NR99 2828 aa9.7□□□□□ -0.86
HIF3A-204ENST00000300862 A4D1N5 150 aa9.69□□□□□ -0.86
HIF3A-204ENST00000300862 SUMO2P61956 95 aaKnown RBP9.69□□□□□ -0.86
HIF3A-204ENST00000300862 FOXI2Q6ZQN5 318 aa9.69□□□□□ -0.86
HIF3A-204ENST00000300862 JPT2Q9H910 190 aa9.69□□□□□ -0.86
HIF3A-204ENST00000300862 H3BUA1 57 aa9.69□□□□□ -0.86
HIF3A-204ENST00000300862 IGKV3-20P01619 116 aa9.69□□□□□ -0.86
HIF3A-204ENST00000300862 HLA-DRB4P13762 266 aa9.69□□□□□ -0.86
HIF3A-204ENST00000300862 FAM19A4Q96LR4 140 aa9.69□□□□□ -0.86
HIF3A-204ENST00000300862 DPH3P1Q9H4G8 78 aa9.69□□□□□ -0.86
HIF3A-204ENST00000300862 HLA-DRB4X5D2U9 266 aa9.69□□□□□ -0.86
HIF3A-204ENST00000300862 ABCA12Q86UK0 2595 aa9.69□□□□□ -0.86
HIF3A-204ENST00000300862 DEFB112Q30KQ8 113 aa9.69□□□□□ -0.86
HIF3A-204ENST00000300862 SIGMAR1Q99720 223 aa9.69□□□□□ -0.86
HIF3A-204ENST00000300862 ZNF462Q96JM2 2506 aa9.68□□□□□ -0.86
HIF3A-204ENST00000300862 GAGE12HA6NDE8 117 aa9.68□□□□□ -0.86
HIF3A-204ENST00000300862 B4DSR2 109 aa9.68□□□□□ -0.86
HIF3A-204ENST00000300862 H3BMG7 143 aa9.68□□□□□ -0.86
HIF3A-204ENST00000300862 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.68□□□□□ -0.86
HIF3A-204ENST00000300862 SH2D6Q7Z4S9 175 aa9.68□□□□□ -0.86
HIF3A-204ENST00000300862 A0A087WX48 190 aa9.68□□□□□ -0.86
HIF3A-204ENST00000300862 BRI3O95415 125 aa9.68□□□□□ -0.86
HIF3A-204ENST00000300862 CFHR3Q02985 330 aa9.68□□□□□ -0.86
HIF3A-204ENST00000300862 CD300EQ496F6 205 aaPredicted RBP9.68□□□□□ -0.86
HIF3A-204ENST00000300862 AMTNQ6UX39 209 aa9.68□□□□□ -0.86
HIF3A-204ENST00000300862 MTURNQ8N3F0 131 aa9.68□□□□□ -0.86
HIF3A-204ENST00000300862 SCGB3A1Q96QR1 104 aa9.68□□□□□ -0.86
HIF3A-204ENST00000300862 TRAV12-3A0A0B4J271 114 aa9.67□□□□□ -0.86
HIF3A-204ENST00000300862 RNF223E7ERA6 249 aa9.67□□□□□ -0.86
HIF3A-204ENST00000300862 F8W1H4 67 aa9.67□□□□□ -0.86
HIF3A-204ENST00000300862 ZNF688P0C7X2 276 aa9.67□□□□□ -0.86
HIF3A-204ENST00000300862 C12orf74Q32Q52 190 aa9.67□□□□□ -0.86
HIF3A-204ENST00000300862 ETDBQ3ZM63 59 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms