RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 IGLC6P0CF74 106 aa10.32□□□□□ -0.76
CTDP1-202ENST00000299543 TMEM95Q3KNT9 176 aa10.32□□□□□ -0.76
CTDP1-202ENST00000299543 ZFAND3Q9H8U3 227 aa10.32□□□□□ -0.76
CTDP1-202ENST00000299543 IGKV3D-20A0A0C4DH25 116 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 NPFFO15130 113 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 EBI3Q14213 229 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 CRYBG3Q68DQ2 2970 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 IGF1P05019 195 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 ID1P41134 155 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 TMEM158Q8WZ71 300 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 RNF185Q96GF1 192 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 LINC01549A6NIU2 74 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 EFNA4P52798 201 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 UCNP55089 124 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 ZFP2Q6ZN57 461 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 U3KQK5 164 aa10.31□□□□□ -0.76
CTDP1-202ENST00000299543 CENPVL3A0A0U1RRI6 287 aa10.3□□□□□ -0.76
CTDP1-202ENST00000299543 M0R381 172 aa10.3□□□□□ -0.76
CTDP1-202ENST00000299543 HOXA3O43365 443 aaPredicted RBP10.3□□□□□ -0.76
CTDP1-202ENST00000299543 GAGE2BQ13066 116 aa10.3□□□□□ -0.76
CTDP1-202ENST00000299543 GAGE2EQ4V326 116 aa10.3□□□□□ -0.76
CTDP1-202ENST00000299543 GAGE2DQ9UEU5 116 aa10.3□□□□□ -0.76
CTDP1-202ENST00000299543 SRD5A1P18405 259 aa10.3□□□□□ -0.76
CTDP1-202ENST00000299543 S100A4P26447 101 aaKnown RBP10.3□□□□□ -0.76
CTDP1-202ENST00000299543 GATD1Q8NB37 220 aa10.3□□□□□ -0.76
CTDP1-202ENST00000299543 CLPSL1A2RUU4 121 aa10.29□□□□□ -0.76
CTDP1-202ENST00000299543 NHLRC4P0CG21 123 aaPredicted RBP10.29□□□□□ -0.76
CTDP1-202ENST00000299543 TRBV12-3P01733 135 aa10.29□□□□□ -0.76
CTDP1-202ENST00000299543 LMO4P61968 165 aa10.29□□□□□ -0.76
CTDP1-202ENST00000299543 RPL32P62910 135 aaKnown RBP10.29□□□□□ -0.76
CTDP1-202ENST00000299543 AJUBAQ96IF1 538 aa10.29□□□□□ -0.76
CTDP1-202ENST00000299543 SLC50A1Q9BRV3 221 aa10.29□□□□□ -0.76
CTDP1-202ENST00000299543 C19orf84I3L1E1 186 aa10.29□□□□□ -0.76
CTDP1-202ENST00000299543 SNCGO76070 127 aa10.29□□□□□ -0.76
CTDP1-202ENST00000299543 RRN3P1Q2M238 152 aa10.29□□□□□ -0.76
CTDP1-202ENST00000299543 ZNF575Q86XF7 245 aa10.29□□□□□ -0.76
CTDP1-202ENST00000299543 CARD19Q96LW7 228 aa10.29□□□□□ -0.76
CTDP1-202ENST00000299543 MRPL35Q9NZE8 188 aaKnown RBP10.29□□□□□ -0.76
CTDP1-202ENST00000299543 PKD1L2Q7Z442 2459 aa10.29□□□□□ -0.76
CTDP1-202ENST00000299543 PAX8Q06710 450 aa10.28□□□□□ -0.76
CTDP1-202ENST00000299543 ZFYVE26Q68DK2 2539 aa10.28□□□□□ -0.76
CTDP1-202ENST00000299543 TRAV41A0A0B4J266 112 aa10.28□□□□□ -0.76
CTDP1-202ENST00000299543 OR11H12B2RN74 326 aa10.28□□□□□ -0.76
CTDP1-202ENST00000299543 OR11H1Q8NG94 326 aa10.28□□□□□ -0.76
CTDP1-202ENST00000299543 OR11H2Q8NH07 326 aa10.28□□□□□ -0.76
CTDP1-202ENST00000299543 USP9XQ93008 2570 aaPredicted RBP10.28□□□□□ -0.76
CTDP1-202ENST00000299543 FLNCQ14315 2725 aa10.28□□□□□ -0.76
CTDP1-202ENST00000299543 DPM2O94777 84 aa10.28□□□□□ -0.76
CTDP1-202ENST00000299543 HHLA3Q9XRX5 114 aa10.28□□□□□ -0.76
CTDP1-202ENST00000299543 F6UB75 175 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 PF4V1P10720 104 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 HLA-DRB4P13762 266 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 UNQ9165/PRO28630Q6UXU0 137 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 BEX4Q9NWD9 120 aaPredicted RBP10.27□□□□□ -0.77
CTDP1-202ENST00000299543 HLA-DRB4X5D2U9 266 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 CELSR2Q9HCU4 2923 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 PIEZO1Q92508 2521 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 GAGE12JA6NER3 117 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 GAGE7O76087 117 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 GAGE12FP0CL80 117 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 GAGE12GP0CL81 117 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 GAGE12IP0CL82 117 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 GAGE4Q13068 117 aa10.27□□□□□ -0.77
CTDP1-202ENST00000299543 DLX4Q92988 240 aaPredicted RBP10.27□□□□□ -0.77
CTDP1-202ENST00000299543 NXT2Q9NPJ8 142 aaKnown RBP10.26□□□□□ -0.77
CTDP1-202ENST00000299543 ITPR1Q14643 2758 aa10.26□□□□□ -0.77
CTDP1-202ENST00000299543 GNLYP22749 145 aa10.26□□□□□ -0.77
CTDP1-202ENST00000299543 LINC01559Q495D7 138 aa10.26□□□□□ -0.77
CTDP1-202ENST00000299543 C5orf56Q8N8D9 126 aa10.26□□□□□ -0.77
CTDP1-202ENST00000299543 MGPP08493 103 aa10.26□□□□□ -0.77
CTDP1-202ENST00000299543 MYOZ3Q8TDC0 251 aa10.26□□□□□ -0.77
CTDP1-202ENST00000299543 TMEM190Q8WZ59 177 aa10.26□□□□□ -0.77
CTDP1-202ENST00000299543 TRBV7-1A0A0A6YYK4 115 aa10.25□□□□□ -0.77
CTDP1-202ENST00000299543 ODF1Q14990 250 aa10.25□□□□□ -0.77
CTDP1-202ENST00000299543 DPF1Q92782 380 aa10.25□□□□□ -0.77
CTDP1-202ENST00000299543 TLN2Q9Y4G6 2542 aa10.25□□□□□ -0.77
CTDP1-202ENST00000299543 PRR9Q5T870 116 aa10.25□□□□□ -0.77
CTDP1-202ENST00000299543 C20orf173Q96LM9 149 aa10.25□□□□□ -0.77
CTDP1-202ENST00000299543 CRLF1O75462 422 aa10.24□□□□□ -0.77
CTDP1-202ENST00000299543 RNASE4P34096 147 aaKnown RBP10.24□□□□□ -0.77
CTDP1-202ENST00000299543 EMP1P54849 157 aa10.24□□□□□ -0.77
CTDP1-202ENST00000299543 MORN3Q6PF18 240 aaPredicted RBP10.24□□□□□ -0.77
CTDP1-202ENST00000299543 UTP20O75691 2785 aaKnown RBP10.24□□□□□ -0.77
CTDP1-202ENST00000299543 COX8CQ7Z4L0 72 aa10.24□□□□□ -0.77
CTDP1-202ENST00000299543 C14orf178Q8N769 122 aaPredicted RBP10.24□□□□□ -0.77
CTDP1-202ENST00000299543 ABCA2Q9BZC7 2435 aa10.24□□□□□ -0.77
CTDP1-202ENST00000299543 BLCAPP62952 87 aa10.23□□□□□ -0.77
CTDP1-202ENST00000299543 FAM159AQ6UWV7 190 aa10.23□□□□□ -0.77
CTDP1-202ENST00000299543 RAX2Q96IS3 184 aa10.23□□□□□ -0.77
CTDP1-202ENST00000299543 MOB4Q9Y3A3 225 aa10.23□□□□□ -0.77
CTDP1-202ENST00000299543 A8MWV9 139 aa10.23□□□□□ -0.77
CTDP1-202ENST00000299543 H3BUX3 64 aa10.23□□□□□ -0.77
CTDP1-202ENST00000299543 IGHV4-39P01824 125 aa10.23□□□□□ -0.77
CTDP1-202ENST00000299543 IGHV4-38-2P0DP08 117 aa10.23□□□□□ -0.77
CTDP1-202ENST00000299543 Q1RN00 199 aa10.23□□□□□ -0.77
CTDP1-202ENST00000299543 CFAP126Q5VTH2 177 aa10.23□□□□□ -0.77
CTDP1-202ENST00000299543 OR10J6PQ8NGY7 276 aa10.23□□□□□ -0.77
CTDP1-202ENST00000299543 PHLDA3Q9Y5J5 127 aa10.23□□□□□ -0.77
CTDP1-202ENST00000299543 MYO9AB2RTY4 2548 aa10.22□□□□□ -0.77
CTDP1-202ENST00000299543 IGHV4-61A0A0C4DH41 118 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms