RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 GATD1Q8NB37 220 aa17.86■□□□□ 0.45
GTF2A1-201ENST00000298173 TMEM208Q9BTX3 173 aa17.86■□□□□ 0.45
GTF2A1-201ENST00000298173 GOLT1BQ9Y3E0 138 aa17.86■□□□□ 0.45
GTF2A1-201ENST00000298173 PHOX2AO14813 284 aa17.85■□□□□ 0.45
GTF2A1-201ENST00000298173 HTN1P15515 57 aa17.85■□□□□ 0.45
GTF2A1-201ENST00000298173 MSRB1Q9NZV6 116 aa17.85■□□□□ 0.45
GTF2A1-201ENST00000298173 APOC4P55056 127 aa17.84■□□□□ 0.45
GTF2A1-201ENST00000298173 CACNG7P62955 275 aa17.84■□□□□ 0.45
GTF2A1-201ENST00000298173 IGHV3OR16-12A0A075B7B8 117 aa17.83■□□□□ 0.45
GTF2A1-201ENST00000298173 SNURFLB1AK76 121 aa17.83■□□□□ 0.45
GTF2A1-201ENST00000298173 SPRY2O43597 315 aa17.83■□□□□ 0.45
GTF2A1-201ENST00000298173 TRGC2P03986 189 aa17.83■□□□□ 0.45
GTF2A1-201ENST00000298173 AZU1P20160 251 aa17.83■□□□□ 0.45
GTF2A1-201ENST00000298173 SSTP61278 116 aa17.83■□□□□ 0.45
GTF2A1-201ENST00000298173 C11orf72Q8NBR9 251 aa17.83■□□□□ 0.45
GTF2A1-201ENST00000298173 TIMM8BQ9Y5J9 83 aaPredicted RBP17.83■□□□□ 0.45
GTF2A1-201ENST00000298173 TWIST1Q15672 202 aa17.83■□□□□ 0.44
GTF2A1-201ENST00000298173 ZNF493Q6ZR52 646 aa17.83■□□□□ 0.44
GTF2A1-201ENST00000298173 PHLDA3Q9Y5J5 127 aa17.83■□□□□ 0.44
GTF2A1-201ENST00000298173 TRAPPC1Q9Y5R8 145 aa17.83■□□□□ 0.44
GTF2A1-201ENST00000298173 NXPH4O95158 308 aa17.82■□□□□ 0.44
GTF2A1-201ENST00000298173 MT-ND6P03923 174 aa17.82■□□□□ 0.44
GTF2A1-201ENST00000298173 HLA-DQA1P01909 254 aa17.81■□□□□ 0.44
GTF2A1-201ENST00000298173 S100A8P05109 93 aa17.81■□□□□ 0.44
GTF2A1-201ENST00000298173 SPANXN1Q5VSR9 72 aa17.81■□□□□ 0.44
GTF2A1-201ENST00000298173 UBE2CO00762 179 aa17.8■□□□□ 0.44
GTF2A1-201ENST00000298173 RAB4BP61018 213 aa17.8■□□□□ 0.44
GTF2A1-201ENST00000298173 FABP9Q0Z7S8 132 aa17.8■□□□□ 0.44
GTF2A1-201ENST00000298173 DMRTA1Q5VZB9 504 aa17.8■□□□□ 0.44
GTF2A1-201ENST00000298173 MGAM2Q2M2H8 2515 aa17.8■□□□□ 0.44
GTF2A1-201ENST00000298173 RNASE8Q8TDE3 154 aaKnown RBP17.8■□□□□ 0.44
GTF2A1-201ENST00000298173 NOTCH1P46531 2555 aa17.79■□□□□ 0.44
GTF2A1-201ENST00000298173 MRPL18Q9H0U6 180 aaKnown RBP17.79■□□□□ 0.44
GTF2A1-201ENST00000298173 GSN-AS1Q9NRJ2 163 aa17.79■□□□□ 0.44
GTF2A1-201ENST00000298173 M0R381 172 aa17.78■□□□□ 0.44
GTF2A1-201ENST00000298173 ZNF415Q09FC8 603 aa17.78■□□□□ 0.44
GTF2A1-201ENST00000298173 SLAQ13239 276 aa17.77■□□□□ 0.44
GTF2A1-201ENST00000298173 ZFP82Q8N141 532 aa17.77■□□□□ 0.44
GTF2A1-201ENST00000298173 TMEM263Q8WUH6 116 aaKnown RBP17.77■□□□□ 0.44
GTF2A1-201ENST00000298173 TMEM191AQ9H0A3 160 aa17.77■□□□□ 0.44
GTF2A1-201ENST00000298173 NBEAL1Q6ZS30 2694 aa17.77■□□□□ 0.44
GTF2A1-201ENST00000298173 IL17DQ8TAD2 202 aa17.77■□□□□ 0.43
GTF2A1-201ENST00000298173 FRZBQ92765 325 aa17.77■□□□□ 0.43
GTF2A1-201ENST00000298173 PTH2Q96A98 100 aa17.77■□□□□ 0.43
GTF2A1-201ENST00000298173 C1orf196B1AJZ1 125 aa17.76■□□□□ 0.43
GTF2A1-201ENST00000298173 PLAC8L1A1L4L8 177 aa17.75■□□□□ 0.43
GTF2A1-201ENST00000298173 Q6ZWC4 215 aa17.75■□□□□ 0.43
GTF2A1-201ENST00000298173 SPXQ9BT56 116 aa17.75■□□□□ 0.43
GTF2A1-201ENST00000298173 X6R8D5 127 aa17.75■□□□□ 0.43
GTF2A1-201ENST00000298173 APCSP02743 223 aa17.74■□□□□ 0.43
GTF2A1-201ENST00000298173 EVI2AP22794 236 aa17.74■□□□□ 0.43
GTF2A1-201ENST00000298173 RRN3P1Q2M238 152 aa17.74■□□□□ 0.43
GTF2A1-201ENST00000298173 RCHY1Q96PM5 261 aa17.74■□□□□ 0.43
GTF2A1-201ENST00000298173 DEFB135Q30KP9 77 aa17.74■□□□□ 0.43
GTF2A1-201ENST00000298173 FAM104BQ5XKR9 115 aa17.74■□□□□ 0.43
GTF2A1-201ENST00000298173 C16orf74Q96GX8 76 aa17.74■□□□□ 0.43
GTF2A1-201ENST00000298173 SMIM9A6NGZ8 99 aa17.73■□□□□ 0.43
GTF2A1-201ENST00000298173 M0R2P5 195 aa17.73■□□□□ 0.43
GTF2A1-201ENST00000298173 ZNF876PQ49A33 203 aa17.73■□□□□ 0.43
GTF2A1-201ENST00000298173 PIK3CD-AS1Q5SR53 167 aa17.73■□□□□ 0.43
GTF2A1-201ENST00000298173 TRGC1P0CF51 173 aa17.72■□□□□ 0.43
GTF2A1-201ENST00000298173 SYT8Q8NBV8 401 aa17.72■□□□□ 0.43
GTF2A1-201ENST00000298173 RNF183Q96D59 192 aa17.72■□□□□ 0.43
GTF2A1-201ENST00000298173 PRB2P02812 416 aaPredicted RBP17.71■□□□□ 0.43
GTF2A1-201ENST00000298173 KIAA1644Q3SXP7 199 aa17.71■□□□□ 0.43
GTF2A1-201ENST00000298173 AMN1Q8IY45 258 aa17.71■□□□□ 0.43
GTF2A1-201ENST00000298173 RNF185Q96GF1 192 aa17.71■□□□□ 0.43
GTF2A1-201ENST00000298173 DNHD1Q96M86 4753 aa17.71■□□□□ 0.43
GTF2A1-201ENST00000298173 K7EIL1 84 aa17.71■□□□□ 0.42
GTF2A1-201ENST00000298173 DAZ2Q13117 558 aaKnown RBP17.71■□□□□ 0.42
GTF2A1-201ENST00000298173 KIF25-AS1Q9Y6Z4 181 aa17.71■□□□□ 0.42
GTF2A1-201ENST00000298173 HIST1H2BKO60814 126 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 HIST1H2BJP06899 126 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 RAB4AP20338 218 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 HIST1H2BOP23527 126 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 HIST1H2BBP33778 126 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 HIST1H2BDP58876 126 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 RAB5BP61020 215 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 HIST1H2BCP62807 126 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 HIST2H2BEQ16778 126 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 RASL10AQ92737 203 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 HIST1H2BHQ93079 126 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 HIST1H2BNQ99877 126 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 HIST1H2BMQ99879 126 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 JPT2Q9H910 190 aa17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 TMA7Q9Y2S6 64 aaKnown RBP17.7■□□□□ 0.42
GTF2A1-201ENST00000298173 SMIM15Q7Z3B0 74 aa17.69■□□□□ 0.42
GTF2A1-201ENST00000298173 C14orf178Q8N769 122 aaPredicted RBP17.69■□□□□ 0.42
GTF2A1-201ENST00000298173 OVOL2Q9BRP0 275 aa17.69■□□□□ 0.42
GTF2A1-201ENST00000298173 NBEAL2Q6ZNJ1 2754 aa17.68■□□□□ 0.42
GTF2A1-201ENST00000298173 LINC00315P59091 139 aa17.68■□□□□ 0.42
GTF2A1-201ENST00000298173 AP1S3Q96PC3 154 aa17.68■□□□□ 0.42
GTF2A1-201ENST00000298173 OR11H2Q8NH07 326 aa17.67■□□□□ 0.42
GTF2A1-201ENST00000298173 NDUFAF3Q9BU61 184 aa17.67■□□□□ 0.42
GTF2A1-201ENST00000298173 MRPL51Q4U2R6 128 aaKnown RBP17.67■□□□□ 0.42
GTF2A1-201ENST00000298173 DPH3P1Q9H4G8 78 aa17.67■□□□□ 0.42
GTF2A1-201ENST00000298173 CRYGDP07320 174 aa17.66■□□□□ 0.42
GTF2A1-201ENST00000298173 LGALS9BQ3B8N2 356 aa17.66■□□□□ 0.42
GTF2A1-201ENST00000298173 POM121L12Q8N7R1 296 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms