RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 APOC4P55056 127 aa11.04□□□□□ -0.64
CCDC140-201ENST00000295226 OR2D3Q8NGH3 330 aa11.04□□□□□ -0.64
CCDC140-201ENST00000295226 IGHV3OR16-12A0A075B7B8 117 aa11.03□□□□□ -0.64
CCDC140-201ENST00000295226 C7orf71A4D174 169 aa11.03□□□□□ -0.64
CCDC140-201ENST00000295226 SERF1AO75920 110 aa11.03□□□□□ -0.64
CCDC140-201ENST00000295226 DEFB135Q30KP9 77 aa11.03□□□□□ -0.64
CCDC140-201ENST00000295226 SBSPONQ8IVN8 264 aa11.03□□□□□ -0.64
CCDC140-201ENST00000295226 CSNK1G2-AS1Q8NCQ2 148 aa11.03□□□□□ -0.64
CCDC140-201ENST00000295226 TP53TG3Q9ULZ0 132 aa11.03□□□□□ -0.64
CCDC140-201ENST00000295226 KIR2DL5BA0A0G2JN68 375 aa11.02□□□□□ -0.64
CCDC140-201ENST00000295226 KIR2DL5BA0A0G2JPC4 375 aa11.02□□□□□ -0.64
CCDC140-201ENST00000295226 TRBV7-9A0A0J9YWB2 115 aa11.02□□□□□ -0.64
CCDC140-201ENST00000295226 SRIP30626 198 aa11.02□□□□□ -0.64
CCDC140-201ENST00000295226 KIR2DL5AQ8N109 375 aa11.02□□□□□ -0.64
CCDC140-201ENST00000295226 C1orf158Q8N1D5 194 aa11.02□□□□□ -0.64
CCDC140-201ENST00000295226 KIR2DL5BQ8NHK3 375 aa11.02□□□□□ -0.64
CCDC140-201ENST00000295226 GTSF1Q8WW33 167 aa11.02□□□□□ -0.64
CCDC140-201ENST00000295226 RETNQ9HD89 108 aa11.02□□□□□ -0.64
CCDC140-201ENST00000295226 TSTD3H0UI37 97 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 ZNF324O75467 553 aaPredicted RBP11.01□□□□□ -0.65
CCDC140-201ENST00000295226 RPS20P60866 119 aaKnown RBP11.01□□□□□ -0.65
CCDC140-201ENST00000295226 PKIAP61925 76 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 RIGQ13278 110 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 DMRTA1Q5VZB9 504 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 SAMD10Q9BYL1 202 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 INSP01308 110 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 HTN1P15515 57 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 SLAQ13239 276 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 MUC21Q5SSG8 566 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 BORCS7Q96B45 105 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 KCNS1Q96KK3 526 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 C11orf21Q9P2W6 132 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 NAGKQ9UJ70 344 aa11.01□□□□□ -0.65
CCDC140-201ENST00000295226 A0A1B0GUT8 65 aa11□□□□□ -0.65
CCDC140-201ENST00000295226 SH2D1AO60880 128 aa11□□□□□ -0.65
CCDC140-201ENST00000295226 CAMPP49913 170 aa11□□□□□ -0.65
CCDC140-201ENST00000295226 GATD1Q8NB37 220 aa11□□□□□ -0.65
CCDC140-201ENST00000295226 PGLYRP4Q96LB8 373 aa11□□□□□ -0.65
CCDC140-201ENST00000295226 LINC01587Q99440 93 aa11□□□□□ -0.65
CCDC140-201ENST00000295226 C1QTNF4Q9BXJ3 329 aa11□□□□□ -0.65
CCDC140-201ENST00000295226 NUPR1O60356 82 aa10.99□□□□□ -0.65
CCDC140-201ENST00000295226 LINC00310P59036 64 aa10.99□□□□□ -0.65
CCDC140-201ENST00000295226 KIAA1644Q3SXP7 199 aa10.99□□□□□ -0.65
CCDC140-201ENST00000295226 LCE2DQ5TA82 110 aaPredicted RBP10.99□□□□□ -0.65
CCDC140-201ENST00000295226 TMEM208Q9BTX3 173 aa10.99□□□□□ -0.65
CCDC140-201ENST00000295226 TRAV21A0A0B4J279 112 aa10.98□□□□□ -0.65
CCDC140-201ENST00000295226 FABP5P3A8MUU1 101 aa10.98□□□□□ -0.65
CCDC140-201ENST00000295226 C18orf32Q8TCD1 76 aa10.98□□□□□ -0.65
CCDC140-201ENST00000295226 ALKBH7Q9BT30 221 aaPredicted RBP10.98□□□□□ -0.65
CCDC140-201ENST00000295226 PRKDCP78527 4128 aaKnown RBP10.98□□□□□ -0.65
CCDC140-201ENST00000295226 TMEM189A5PLL7 270 aa10.98□□□□□ -0.65
CCDC140-201ENST00000295226 RCHY1Q96PM5 261 aa10.98□□□□□ -0.65
CCDC140-201ENST00000295226 TMSB15BA0A087X1C1 80 aa10.97□□□□□ -0.65
CCDC140-201ENST00000295226 SCGB1D1O95968 90 aa10.97□□□□□ -0.65
CCDC140-201ENST00000295226 ORM1P02763 201 aa10.97□□□□□ -0.65
CCDC140-201ENST00000295226 AZU1P20160 251 aa10.97□□□□□ -0.65
CCDC140-201ENST00000295226 ANXA2RQ3ZCQ2 193 aa10.97□□□□□ -0.65
CCDC140-201ENST00000295226 Q6ZWC4 215 aa10.97□□□□□ -0.65
CCDC140-201ENST00000295226 GOLT1BQ9Y3E0 138 aa10.97□□□□□ -0.65
CCDC140-201ENST00000295226 IGKV3D-20A0A0C4DH25 116 aa10.96□□□□□ -0.65
CCDC140-201ENST00000295226 LINC00587B1AMM8 73 aa10.96□□□□□ -0.65
CCDC140-201ENST00000295226 GNRH2O43555 120 aa10.96□□□□□ -0.65
CCDC140-201ENST00000295226 SPRY2O43597 315 aa10.96□□□□□ -0.65
CCDC140-201ENST00000295226 RAB4AP20338 218 aa10.96□□□□□ -0.65
CCDC140-201ENST00000295226 CDPF1Q6NVV7 123 aa10.96□□□□□ -0.65
CCDC140-201ENST00000295226 ZNF705AQ6ZN79 300 aaPredicted RBP10.96□□□□□ -0.65
CCDC140-201ENST00000295226 OR11H2Q8NH07 326 aa10.96□□□□□ -0.65
CCDC140-201ENST00000295226 RNF183Q96D59 192 aa10.96□□□□□ -0.65
CCDC140-201ENST00000295226 OVOL2Q9BRP0 275 aa10.96□□□□□ -0.65
CCDC140-201ENST00000295226 TENM3Q9P273 2699 aa10.96□□□□□ -0.65
CCDC140-201ENST00000295226 AMTP48728 403 aa10.95□□□□□ -0.66
CCDC140-201ENST00000295226 ZNF575Q86XF7 245 aa10.95□□□□□ -0.66
CCDC140-201ENST00000295226 IGHV1OR15-1A0A075B7D0 117 aa10.95□□□□□ -0.66
CCDC140-201ENST00000295226 F2Z2F3 143 aa10.95□□□□□ -0.66
CCDC140-201ENST00000295226 FAM159AQ6UWV7 190 aa10.95□□□□□ -0.66
CCDC140-201ENST00000295226 CHCHD1Q96BP2 118 aaKnown RBP10.95□□□□□ -0.66
CCDC140-201ENST00000295226 X6R8D5 127 aa10.95□□□□□ -0.66
CCDC140-201ENST00000295226 CBY3A6NI87 242 aa10.94□□□□□ -0.66
CCDC140-201ENST00000295226 DEFB4AO15263 64 aa10.94□□□□□ -0.66
CCDC140-201ENST00000295226 HSBP1O75506 76 aa10.94□□□□□ -0.66
CCDC140-201ENST00000295226 B9D2Q9BPU9 175 aa10.94□□□□□ -0.66
CCDC140-201ENST00000295226 C20orf144Q9BQM9 153 aa10.94□□□□□ -0.66
CCDC140-201ENST00000295226 SSBP4Q9BWG4 385 aaPredicted RBP10.94□□□□□ -0.66
CCDC140-201ENST00000295226 DNAH9Q9NYC9 4486 aa10.94□□□□□ -0.66
CCDC140-201ENST00000295226 COL7A1Q02388 2944 aa10.93□□□□□ -0.66
CCDC140-201ENST00000295226 PMCHP20382 165 aa10.93□□□□□ -0.66
CCDC140-201ENST00000295226 CTAG1AP78358 180 aa10.93□□□□□ -0.66
CCDC140-201ENST00000295226 ZNF493Q6ZR52 646 aa10.93□□□□□ -0.66
CCDC140-201ENST00000295226 TM2D3Q9BRN9 247 aa10.93□□□□□ -0.66
CCDC140-201ENST00000295226 MDFICQ9P1T7 246 aa10.92□□□□□ -0.66
CCDC140-201ENST00000295226 HUWE1Q7Z6Z7 4374 aaKnown RBP10.92□□□□□ -0.66
CCDC140-201ENST00000295226 ARMS2P0C7Q2 107 aa10.92□□□□□ -0.66
CCDC140-201ENST00000295226 DDTP30046 118 aa10.92□□□□□ -0.66
CCDC140-201ENST00000295226 CTRLP40313 264 aa10.92□□□□□ -0.66
CCDC140-201ENST00000295226 LINC01559Q495D7 138 aa10.92□□□□□ -0.66
CCDC140-201ENST00000295226 TIMM8BQ9Y5J9 83 aaPredicted RBP10.92□□□□□ -0.66
CCDC140-201ENST00000295226 EMP1P54849 157 aa10.91□□□□□ -0.66
CCDC140-201ENST00000295226 RRN3P1Q2M238 152 aa10.91□□□□□ -0.66
CCDC140-201ENST00000295226 ZNF664Q8N3J9 261 aa10.91□□□□□ -0.66
CCDC140-201ENST00000295226 SPATA25Q9BR10 227 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms