RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 ATP6V0E1O15342 81 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 CIDEAO60543 219 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 GCSHP23434 173 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 HLA-DMBP28068 263 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 UBE2D1P51668 147 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 ATP5G2Q06055 141 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 LYRM7Q5U5X0 104 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 PRIMA1Q86XR5 153 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 LINC01560Q8TB33 94 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 EDA2RQ9HAV5 297 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 PCNX1Q96RV3 2341 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 PRRC2AP48634 2157 aaKnown RBP4.68□□□□□ -1.66
VCAM1-201ENST00000294728 TRAV40A0A0B4J280 105 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 GAS8-AS1O95177 125 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 TRGV3P03979 118 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 RASL10AQ92737 203 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 ZNF479Q96JC4 524 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 TIMM17AQ99595 171 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 MDFIQ99750 246 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 KIF25-AS1Q9Y6Z4 181 aa4.68□□□□□ -1.66
VCAM1-201ENST00000294728 OR11H12B2RN74 326 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 H3BMG7 143 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 GTSCR1Q86UQ5 136 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 SBSPONQ8IVN8 264 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 MAPKAPK5-AS1Q8N8E1 139 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 OR11H1Q8NG94 326 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 OR11H2Q8NH07 326 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 C18orf15Q96N68 181 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 MOB4Q9Y3A3 225 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 DCHS2Q6V1P9 2916 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 K7EMT4 169 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 ZFP36P26651 326 aaKnown RBP4.67□□□□□ -1.66
VCAM1-201ENST00000294728 EFNA4P52798 201 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 SPANXN1Q5VSR9 72 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 KRTAP1-3Q8IUG1 177 aa4.67□□□□□ -1.66
VCAM1-201ENST00000294728 TIMM8BQ9Y5J9 83 aaPredicted RBP4.67□□□□□ -1.66
VCAM1-201ENST00000294728 KLLNB2CW77 178 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 ASIPP42127 132 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 UBE2D3P61077 147 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 UBE2D2P62837 147 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 TCTEX1D4Q5JR98 221 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 GPHB5Q86YW7 130 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 OR10J6PQ8NGY7 276 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 BAALCQ8WXS3 180 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 SIGMAR1Q99720 223 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 TMEM160Q9NX00 188 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 ZFHX3Q15911 3703 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 TRBV20-1A0A075B6N2 111 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 TMEM89A2RUT3 159 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 C11orf86A6NJI1 115 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 NPFFO15130 113 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 GATA1P15976 413 aaPredicted RBP4.66□□□□□ -1.66
VCAM1-201ENST00000294728 CRYBA4P53673 196 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 LMO4P61968 165 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 NRGNQ92686 78 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 SCGB3A1Q96QR1 104 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 NHP2Q9NX24 153 aaKnown RBP4.66□□□□□ -1.66
VCAM1-201ENST00000294728 S4R3C0 116 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 ITPR3Q14573 2671 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 SVILO95425 2214 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 TRAV41A0A0B4J266 112 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 A0A0J9YX75 114 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 TEX48A0A1B0GUV7 120 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 IGIPA6NJ69 53 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 IGHV1-69P01742 117 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 LGALS1P09382 135 aaKnown RBP4.66□□□□□ -1.66
VCAM1-201ENST00000294728 POLR2KP53803 58 aaKnown RBP4.66□□□□□ -1.66
VCAM1-201ENST00000294728 FXYD7P58549 80 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 LINC00315P59091 139 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 GAGE13Q4V321 117 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 MORN3Q6PF18 240 aaPredicted RBP4.66□□□□□ -1.66
VCAM1-201ENST00000294728 CLEC19AQ6UXS0 136 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 MTURNQ8N3F0 131 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 RNF182Q8N6D2 247 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 RAB37Q96AX2 223 aa4.66□□□□□ -1.66
VCAM1-201ENST00000294728 FAM90A27PA6NNH2 459 aa4.65□□□□□ -1.66
VCAM1-201ENST00000294728 LGALS9O00182 355 aa4.65□□□□□ -1.66
VCAM1-201ENST00000294728 HOXA3O43365 443 aaPredicted RBP4.65□□□□□ -1.66
VCAM1-201ENST00000294728 SAA4P35542 130 aa4.65□□□□□ -1.66
VCAM1-201ENST00000294728 PRB3Q04118 309 aaPredicted RBP4.65□□□□□ -1.66
VCAM1-201ENST00000294728 C16orf92Q96LL3 132 aa4.65□□□□□ -1.66
VCAM1-201ENST00000294728 HIST1H4GQ99525 98 aa4.65□□□□□ -1.66
VCAM1-201ENST00000294728 TRBV27A0A0K0K1C4 114 aa4.65□□□□□ -1.67
VCAM1-201ENST00000294728 GAGE12HA6NDE8 117 aa4.65□□□□□ -1.67
VCAM1-201ENST00000294728 IGHV3-23P01764 117 aa4.65□□□□□ -1.67
VCAM1-201ENST00000294728 IGHG2P01859 326 aa4.65□□□□□ -1.67
VCAM1-201ENST00000294728 CD7P09564 240 aa4.65□□□□□ -1.67
VCAM1-201ENST00000294728 PPIFP30405 207 aaKnown RBP4.65□□□□□ -1.67
VCAM1-201ENST00000294728 RHOHQ15669 191 aa4.65□□□□□ -1.67
VCAM1-201ENST00000294728 DEFB113Q30KQ7 82 aa4.65□□□□□ -1.67
VCAM1-201ENST00000294728 CFAP126Q5VTH2 177 aa4.65□□□□□ -1.67
VCAM1-201ENST00000294728 C2orf66Q6UXQ4 117 aa4.65□□□□□ -1.67
VCAM1-201ENST00000294728 NFE4Q86UQ8 179 aa4.65□□□□□ -1.67
VCAM1-201ENST00000294728 CYSLTR1Q9Y271 337 aa4.65□□□□□ -1.67
VCAM1-201ENST00000294728 RNASE3P12724 160 aaKnown RBP4.64□□□□□ -1.67
VCAM1-201ENST00000294728 HERVK_113P61574 105 aa4.64□□□□□ -1.67
VCAM1-201ENST00000294728 NSUN5P1Q3KNT7 163 aa4.64□□□□□ -1.67
VCAM1-201ENST00000294728 PIK3CD-AS1Q5SR53 167 aa4.64□□□□□ -1.67
VCAM1-201ENST00000294728 PRR9Q5T870 116 aa4.64□□□□□ -1.67
VCAM1-201ENST00000294728 IGFL4Q6B9Z1 124 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms