RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ZNF491Q8N8L2 437 aa12.63□□□□□ -0.39
SSRP1-202ENST00000293880 SLC25A29Q8N8R3 303 aa12.63□□□□□ -0.39
SSRP1-202ENST00000293880 FER1L5A0AVI2 2057 aa12.63□□□□□ -0.39
SSRP1-202ENST00000293880 NPBQ8NG41 125 aa12.63□□□□□ -0.39
SSRP1-202ENST00000293880 C20orf78Q9BR46 151 aa12.63□□□□□ -0.39
SSRP1-202ENST00000293880 PLXNA3P51805 1871 aa12.63□□□□□ -0.39
SSRP1-202ENST00000293880 ARFGEF3Q5TH69 2177 aa12.63□□□□□ -0.39
SSRP1-202ENST00000293880 MYO7BQ6PIF6 2116 aa12.62□□□□□ -0.39
SSRP1-202ENST00000293880 MSRB1Q9NZV6 116 aa12.62□□□□□ -0.39
SSRP1-202ENST00000293880 NDUFV3P56181 108 aaKnown RBP12.62□□□□□ -0.39
SSRP1-202ENST00000293880 IGHV4-59P01825 116 aa12.62□□□□□ -0.39
SSRP1-202ENST00000293880 J3QKU1 62 aa12.62□□□□□ -0.39
SSRP1-202ENST00000293880 PROP1O75360 226 aa12.62□□□□□ -0.39
SSRP1-202ENST00000293880 ANKRD39Q53RE8 183 aa12.61□□□□□ -0.39
SSRP1-202ENST00000293880 VSIG2Q96IQ7 327 aa12.61□□□□□ -0.39
SSRP1-202ENST00000293880 K7EM74 188 aa12.61□□□□□ -0.39
SSRP1-202ENST00000293880 AGPAT4-IT1Q9H0P7 198 aa12.61□□□□□ -0.39
SSRP1-202ENST00000293880 NREPQ16612 68 aa12.61□□□□□ -0.39
SSRP1-202ENST00000293880 TMEM61Q8N0U2 210 aa12.61□□□□□ -0.39
SSRP1-202ENST00000293880 A4D1N5 150 aa12.61□□□□□ -0.39
SSRP1-202ENST00000293880 CFPP27918 469 aa12.61□□□□□ -0.39
SSRP1-202ENST00000293880 RPL39P62891 51 aaKnown RBP12.61□□□□□ -0.39
SSRP1-202ENST00000293880 WDR81Q562E7 1941 aa12.61□□□□□ -0.39
SSRP1-202ENST00000293880 C11orf52Q96A22 123 aa12.61□□□□□ -0.39
SSRP1-202ENST00000293880 TSC2P49815 1807 aa12.6□□□□□ -0.39
SSRP1-202ENST00000293880 LOXL1Q08397 574 aaPredicted RBP12.6□□□□□ -0.39
SSRP1-202ENST00000293880 GRNP28799 593 aaKnown RBP12.6□□□□□ -0.39
SSRP1-202ENST00000293880 DEFB112Q30KQ8 113 aa12.6□□□□□ -0.39
SSRP1-202ENST00000293880 PHF3Q92576 2039 aaKnown RBP12.6□□□□□ -0.39
SSRP1-202ENST00000293880 KIR2DL5BA0A0G2JN68 375 aa12.59□□□□□ -0.39
SSRP1-202ENST00000293880 KIR2DL5BA0A0G2JPC4 375 aa12.59□□□□□ -0.39
SSRP1-202ENST00000293880 RHOHQ15669 191 aa12.59□□□□□ -0.39
SSRP1-202ENST00000293880 KIR2DL5AQ8N109 375 aa12.59□□□□□ -0.39
SSRP1-202ENST00000293880 TAX1BP3O14907 124 aa12.59□□□□□ -0.39
SSRP1-202ENST00000293880 FUSP35637 526 aaKnown RBP eCLIP12.59□□□□□ -0.39
SSRP1-202ENST00000293880 RSPO1Q2MKA7 263 aaPredicted RBP12.59□□□□□ -0.39
SSRP1-202ENST00000293880 MGAMO43451 1857 aa12.59□□□□□ -0.39
SSRP1-202ENST00000293880 TEN1Q86WV5 123 aa12.59□□□□□ -0.39
SSRP1-202ENST00000293880 PLXND1Q9Y4D7 1925 aa12.59□□□□□ -0.39
SSRP1-202ENST00000293880 K7EQD1 137 aa12.59□□□□□ -0.39
SSRP1-202ENST00000293880 CHD3Q12873 2000 aaKnown RBP12.59□□□□□ -0.39
SSRP1-202ENST00000293880 HELZP42694 1942 aaKnown RBP12.59□□□□□ -0.39
SSRP1-202ENST00000293880 GYPEP15421 78 aa12.59□□□□□ -0.39
SSRP1-202ENST00000293880 C10orf105Q8TEF2 133 aa12.58□□□□□ -0.4
SSRP1-202ENST00000293880 MT-ATP8P03928 68 aa12.58□□□□□ -0.4
SSRP1-202ENST00000293880 TIRAPP58753 221 aa12.58□□□□□ -0.4
SSRP1-202ENST00000293880 LINC01620Q4KN68 170 aa12.58□□□□□ -0.4
SSRP1-202ENST00000293880 RMI2Q96E14 147 aa12.58□□□□□ -0.4
SSRP1-202ENST00000293880 TNRC6BQ9UPQ9 1833 aaKnown RBP12.58□□□□□ -0.4
SSRP1-202ENST00000293880 ETDCA0A1B0GVM5 59 aa12.58□□□□□ -0.4
SSRP1-202ENST00000293880 RNF152Q8N8N0 203 aa12.58□□□□□ -0.4
SSRP1-202ENST00000293880 MED12Q93074 2177 aa12.58□□□□□ -0.4
SSRP1-202ENST00000293880 DEFB4AO15263 64 aa12.58□□□□□ -0.4
SSRP1-202ENST00000293880 PRR20EP86478 221 aa12.57□□□□□ -0.4
SSRP1-202ENST00000293880 PRR20CP86479 221 aa12.57□□□□□ -0.4
SSRP1-202ENST00000293880 PRR20DP86480 221 aa12.57□□□□□ -0.4
SSRP1-202ENST00000293880 PRR20BP86481 221 aa12.57□□□□□ -0.4
SSRP1-202ENST00000293880 PRR20AP86496 221 aa12.57□□□□□ -0.4
SSRP1-202ENST00000293880 DEFB1P60022 68 aa12.57□□□□□ -0.4
SSRP1-202ENST00000293880 FNDC1Q4ZHG4 1894 aaPredicted RBP12.57□□□□□ -0.4
SSRP1-202ENST00000293880 VWA8A3KMH1 1905 aa12.57□□□□□ -0.4
SSRP1-202ENST00000293880 LY6G6EA0A0G2JKS1 128 aa12.57□□□□□ -0.4
SSRP1-202ENST00000293880 CTSZQ9UBR2 303 aa12.57□□□□□ -0.4
SSRP1-202ENST00000293880 U3KQA8 63 aa12.57□□□□□ -0.4
SSRP1-202ENST00000293880 TRBV12-3P01733 135 aa12.56□□□□□ -0.4
SSRP1-202ENST00000293880 HIST2H2BCQ6DN03 193 aa12.56□□□□□ -0.4
SSRP1-202ENST00000293880 IGKV2D-26A0A0A0MRZ7 120 aa12.56□□□□□ -0.4
SSRP1-202ENST00000293880 GATA3P23771 443 aa12.56□□□□□ -0.4
SSRP1-202ENST00000293880 SEC61GP60059 68 aa12.56□□□□□ -0.4
SSRP1-202ENST00000293880 CAMK2N2Q96S95 79 aa12.56□□□□□ -0.4
SSRP1-202ENST00000293880 SND1-IT1Q9HBX3 110 aa12.56□□□□□ -0.4
SSRP1-202ENST00000293880 C9orf47Q6ZRZ4 202 aa12.56□□□□□ -0.4
SSRP1-202ENST00000293880 FRMPD3Q5JV73 1810 aa12.56□□□□□ -0.4
SSRP1-202ENST00000293880 IGHV4-38-2P0DP08 117 aa12.55□□□□□ -0.4
SSRP1-202ENST00000293880 C20orf197Q8N268 126 aa12.55□□□□□ -0.4
SSRP1-202ENST00000293880 A0A0J9YXV3 536 aa12.55□□□□□ -0.4
SSRP1-202ENST00000293880 CCL24O00175 119 aa12.55□□□□□ -0.4
SSRP1-202ENST00000293880 SDIM1Q6ZPB5 146 aa12.55□□□□□ -0.4
SSRP1-202ENST00000293880 LINC00311Q8N616 119 aa12.54□□□□□ -0.4
SSRP1-202ENST00000293880 FAM110AQ9BQ89 295 aa12.54□□□□□ -0.4
SSRP1-202ENST00000293880 NBASA2RRP1 2371 aa12.54□□□□□ -0.4
SSRP1-202ENST00000293880 LGALS9O00182 355 aa12.54□□□□□ -0.4
SSRP1-202ENST00000293880 PLA2G5P39877 138 aa12.54□□□□□ -0.4
SSRP1-202ENST00000293880 DOPEY2Q9Y3R5 2298 aa12.54□□□□□ -0.4
SSRP1-202ENST00000293880 PLA2G2EQ9NZK7 142 aa12.54□□□□□ -0.4
SSRP1-202ENST00000293880 LECT2O14960 151 aa12.54□□□□□ -0.4
SSRP1-202ENST00000293880 SCXQ7RTU7 201 aa12.53□□□□□ -0.4
SSRP1-202ENST00000293880 ZNF503Q96F45 646 aa12.53□□□□□ -0.4
SSRP1-202ENST00000293880 KIAA2026Q5HYC2 2103 aa12.53□□□□□ -0.4
SSRP1-202ENST00000293880 PRAC2D3DTV9 90 aa12.53□□□□□ -0.4
SSRP1-202ENST00000293880 ZMAT4Q9H898 229 aa12.53□□□□□ -0.4
SSRP1-202ENST00000293880 SPTBN1Q01082 2364 aaKnown RBP12.53□□□□□ -0.4
SSRP1-202ENST00000293880 FRMD6-AS1P0C7T7 363 aa12.52□□□□□ -0.4
SSRP1-202ENST00000293880 FGF23Q9GZV9 251 aaPredicted RBP12.52□□□□□ -0.4
SSRP1-202ENST00000293880 GTSF1Q8WW33 167 aa12.52□□□□□ -0.41
SSRP1-202ENST00000293880 H0Y9J4 135 aa12.52□□□□□ -0.41
SSRP1-202ENST00000293880 PLA2G2CQ5R387 149 aa12.52□□□□□ -0.41
SSRP1-202ENST00000293880 SEM1Q6ZVN7 128 aa12.52□□□□□ -0.41
SSRP1-202ENST00000293880 A0A0J9YWU9 116 aa12.52□□□□□ -0.41
SSRP1-202ENST00000293880 F8W735 103 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms