RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 TIMM8BQ9Y5J9 83 aaPredicted RBP8.68□□□□□ -1.02
SSRP1-201ENST00000278412 A0A0J9YX75 114 aa8.68□□□□□ -1.02
SSRP1-201ENST00000278412 MRPL53Q96EL3 112 aaKnown RBP8.68□□□□□ -1.02
SSRP1-201ENST00000278412 MAP6D1Q9H9H5 199 aa8.68□□□□□ -1.02
SSRP1-201ENST00000278412 PF4P02776 101 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 TRAV12-3A0A0B4J271 114 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 SERTM2A0A1B0GWG4 89 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 F2Z2F3 143 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 K7ERU9 68 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 RBMY1A1P0DJD3 496 aaKnown RBP8.67□□□□□ -1.02
SSRP1-201ENST00000278412 RBMY1CP0DJD4 496 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 SNRPD3P62318 126 aaKnown RBP8.67□□□□□ -1.02
SSRP1-201ENST00000278412 SLAQ13239 276 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 RBMY1FQ15415 496 aaKnown RBP8.67□□□□□ -1.02
SSRP1-201ENST00000278412 NDUFA11Q86Y39 141 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 LINC00482Q8N8I6 264 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 FAM19A4Q96LR4 140 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 TMEM189A5PLL7 270 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 SNURFLB1AK76 121 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 ID1P41134 155 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 CITED1Q99966 193 aa8.67□□□□□ -1.02
SSRP1-201ENST00000278412 GNRH2O43555 120 aa8.66□□□□□ -1.02
SSRP1-201ENST00000278412 GPX1P07203 203 aa8.66□□□□□ -1.02
SSRP1-201ENST00000278412 HINT1P49773 126 aaPredicted RBP8.66□□□□□ -1.02
SSRP1-201ENST00000278412 LYZL1Q6UWQ5 148 aa8.66□□□□□ -1.02
SSRP1-201ENST00000278412 TMEM136Q6ZRR5 245 aa8.66□□□□□ -1.02
SSRP1-201ENST00000278412 CLUHP3Q96NS8 147 aa8.66□□□□□ -1.02
SSRP1-201ENST00000278412 NDFIP1Q9BT67 221 aa8.66□□□□□ -1.02
SSRP1-201ENST00000278412 TSPOP30536 169 aa8.66□□□□□ -1.02
SSRP1-201ENST00000278412 NAT8BQ9UHF3 227 aa8.66□□□□□ -1.02
SSRP1-201ENST00000278412 SERF1AO75920 110 aa8.65□□□□□ -1.02
SSRP1-201ENST00000278412 AMTNQ6UX39 209 aa8.65□□□□□ -1.02
SSRP1-201ENST00000278412 COX8CQ7Z4L0 72 aa8.65□□□□□ -1.02
SSRP1-201ENST00000278412 A6NJY4 79 aa8.65□□□□□ -1.03
SSRP1-201ENST00000278412 FABP5P3A8MUU1 101 aa8.65□□□□□ -1.03
SSRP1-201ENST00000278412 A8MWL6 223 aa8.65□□□□□ -1.03
SSRP1-201ENST00000278412 VAMP3Q15836 100 aa8.65□□□□□ -1.03
SSRP1-201ENST00000278412 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.03
SSRP1-201ENST00000278412 ANXA2RQ3ZCQ2 193 aa8.64□□□□□ -1.03
SSRP1-201ENST00000278412 LINC00477Q96M19 166 aa8.64□□□□□ -1.03
SSRP1-201ENST00000278412 IGLV1-51P01701 117 aa8.64□□□□□ -1.03
SSRP1-201ENST00000278412 HTN1P15515 57 aa8.64□□□□□ -1.03
SSRP1-201ENST00000278412 OR10AG1Q8NH19 301 aa8.64□□□□□ -1.03
SSRP1-201ENST00000278412 A0A1B0GXF2 115 aa8.63□□□□□ -1.03
SSRP1-201ENST00000278412 H3BMM0 161 aa8.63□□□□□ -1.03
SSRP1-201ENST00000278412 Q0VG73 95 aa8.63□□□□□ -1.03
SSRP1-201ENST00000278412 H3BVH4 76 aa8.63□□□□□ -1.03
SSRP1-201ENST00000278412 GAS8-AS1O95177 125 aa8.63□□□□□ -1.03
SSRP1-201ENST00000278412 EBLN2Q6P2I7 272 aa8.63□□□□□ -1.03
SSRP1-201ENST00000278412 SAMD10Q9BYL1 202 aa8.63□□□□□ -1.03
SSRP1-201ENST00000278412 KLLNB2CW77 178 aa8.62□□□□□ -1.03
SSRP1-201ENST00000278412 CRXO43186 299 aaPredicted RBP8.62□□□□□ -1.03
SSRP1-201ENST00000278412 CRISP2P16562 243 aa8.62□□□□□ -1.03
SSRP1-201ENST00000278412 KRTDAPP60985 99 aa8.62□□□□□ -1.03
SSRP1-201ENST00000278412 IGLC6P0CF74 106 aa8.62□□□□□ -1.03
SSRP1-201ENST00000278412 LINC01559Q495D7 138 aa8.62□□□□□ -1.03
SSRP1-201ENST00000278412 CT83Q5H943 113 aa8.62□□□□□ -1.03
SSRP1-201ENST00000278412 FOXI2Q6ZQN5 318 aa8.62□□□□□ -1.03
SSRP1-201ENST00000278412 NIT1Q86X76 327 aa8.62□□□□□ -1.03
SSRP1-201ENST00000278412 SPAG8Q99932 426 aaPredicted RBP8.62□□□□□ -1.03
SSRP1-201ENST00000278412 ZNF324O75467 553 aaPredicted RBP8.61□□□□□ -1.03
SSRP1-201ENST00000278412 IGLL1P15814 213 aa8.61□□□□□ -1.03
SSRP1-201ENST00000278412 FER1L6-AS1Q8NA97 138 aa8.61□□□□□ -1.03
SSRP1-201ENST00000278412 C19orf73Q9NVV2 129 aa8.61□□□□□ -1.03
SSRP1-201ENST00000278412 XCL2Q9UBD3 114 aa8.61□□□□□ -1.03
SSRP1-201ENST00000278412 TENM3Q9P273 2699 aa8.61□□□□□ -1.03
SSRP1-201ENST00000278412 HLA-DRB4P13762 266 aa8.61□□□□□ -1.03
SSRP1-201ENST00000278412 NTF3P20783 257 aa8.61□□□□□ -1.03
SSRP1-201ENST00000278412 CFAP161Q6P656 301 aa8.61□□□□□ -1.03
SSRP1-201ENST00000278412 HLA-DRB4X5D2U9 266 aa8.61□□□□□ -1.03
SSRP1-201ENST00000278412 NACAE9PAV3 2078 aa8.61□□□□□ -1.03
SSRP1-201ENST00000278412 OR4C46A6NHA9 309 aa8.6□□□□□ -1.03
SSRP1-201ENST00000278412 TAX1BP3O14907 124 aa8.6□□□□□ -1.03
SSRP1-201ENST00000278412 RPL35AP18077 110 aaKnown RBP8.6□□□□□ -1.03
SSRP1-201ENST00000278412 MDFICQ9P1T7 246 aa8.6□□□□□ -1.03
SSRP1-201ENST00000278412 SMKR1H3BMG3 65 aa8.6□□□□□ -1.03
SSRP1-201ENST00000278412 RIPPLY3P57055 190 aa8.6□□□□□ -1.03
SSRP1-201ENST00000278412 BAGE3Q86Y29 109 aa8.6□□□□□ -1.03
SSRP1-201ENST00000278412 DEFB125Q8N687 156 aa8.6□□□□□ -1.03
SSRP1-201ENST00000278412 TRAV9-1A0A075B6T8 112 aa8.59□□□□□ -1.03
SSRP1-201ENST00000278412 A0A1B0GUT8 65 aa8.59□□□□□ -1.03
SSRP1-201ENST00000278412 C7orf71A4D174 169 aa8.59□□□□□ -1.03
SSRP1-201ENST00000278412 HBBP68871 147 aa8.59□□□□□ -1.03
SSRP1-201ENST00000278412 AMN1Q8IY45 258 aa8.59□□□□□ -1.03
SSRP1-201ENST00000278412 RCHY1Q96PM5 261 aa8.59□□□□□ -1.03
SSRP1-201ENST00000278412 JPT2Q9H910 190 aa8.59□□□□□ -1.03
SSRP1-201ENST00000278412 FBLL1A6NHQ2 334 aaKnown RBP8.59□□□□□ -1.03
SSRP1-201ENST00000278412 SRIP30626 198 aa8.59□□□□□ -1.03
SSRP1-201ENST00000278412 TWIST1Q15672 202 aa8.59□□□□□ -1.03
SSRP1-201ENST00000278412 Q6AWC8 147 aa8.59□□□□□ -1.03
SSRP1-201ENST00000278412 GFRA4Q9GZZ7 299 aa8.59□□□□□ -1.03
SSRP1-201ENST00000278412 SIGLEC8Q9NYZ4 499 aa8.59□□□□□ -1.03
SSRP1-201ENST00000278412 IGHV3OR16-12A0A075B7B8 117 aa8.58□□□□□ -1.04
SSRP1-201ENST00000278412 M0R381 172 aa8.58□□□□□ -1.04
SSRP1-201ENST00000278412 RNASE3P12724 160 aaKnown RBP8.58□□□□□ -1.04
SSRP1-201ENST00000278412 EVI2AP22794 236 aa8.58□□□□□ -1.04
SSRP1-201ENST00000278412 GNB1LQ9BYB4 327 aa8.58□□□□□ -1.04
SSRP1-201ENST00000278412 TRAV21A0A0B4J279 112 aa8.58□□□□□ -1.04
SSRP1-201ENST00000278412 GAGE12BA1L429 117 aa8.58□□□□□ -1.04
SSRP1-201ENST00000278412 OR11H12B2RN74 326 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 1002.6 ms