RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 ZNF843Q8N446 348 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 RNF182Q8N6D2 247 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 C18orf32Q8TCD1 76 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 ZNF418Q8TF45 676 aaPredicted RBP2.23□□□□□ -2.05
HERC4-201ENST00000277817 LINC01587Q99440 93 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 ST20Q9HBF5 79 aa2.23□□□□□ -2.05
HERC4-201ENST00000277817 NXT2Q9NPJ8 142 aaKnown RBP2.23□□□□□ -2.05
HERC4-201ENST00000277817 FRAS1Q86XX4 4008 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 IGKV3D-20A0A0C4DH25 116 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 FAM231BA6NCW3 169 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 NPFFO15130 113 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 DPM2O94777 84 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 PPP1R17O96001 155 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 IGLV2-14P01704 120 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 YPEL3P61236 119 aaPredicted RBP2.22□□□□□ -2.05
HERC4-201ENST00000277817 PSMG4Q5JS54 123 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 MINOS1Q5TGZ0 78 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 TEX36Q5VZQ5 186 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 Q86TA4 180 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 STPG4Q8N801 248 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 OR4X2Q8NGF9 303 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 SHANK2-AS3Q9BTD1 123 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 Q9UF83 564 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 MINOS1-NBL1R4GNA1 71 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 ALMS1Q8TCU4 4167 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 A0A1B0GWB2 263 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 TMEM238C9JI98 176 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 M0R1W7 72 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 IGKCP01834 107 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 ZNF688P0C7X2 276 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 EMP1P54849 157 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 LDLRAD2Q5SZI1 272 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 Q6YL49 198 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 LYPD1Q8N2G4 141 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 C14orf178Q8N769 122 aaPredicted RBP2.22□□□□□ -2.05
HERC4-201ENST00000277817 C8orf49Q96NF6 230 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 SNHG12Q9BXW3 62 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 KRTAP9-2Q9BYQ4 174 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 MRPL27Q9P0M9 148 aaKnown RBP2.22□□□□□ -2.05
HERC4-201ENST00000277817 TRBV19A0A075B6N1 114 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 IGHV3-64A0A075B6Q5 118 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 IGHV3-73A0A0B4J1V6 119 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 TRAV12-3A0A0B4J271 114 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 DLEU1O43261 78 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 NUPR1O60356 82 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 LHBP01229 141 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 CIRBPQ14011 172 aaKnown RBP2.22□□□□□ -2.05
HERC4-201ENST00000277817 MEIG1Q5JSS6 88 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 RUSC1-AS1Q66K80 236 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 CRIP3Q6Q6R5 217 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 ORAOV1Q8WV07 137 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 MOB4Q9Y3A3 225 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 TNCP24821 2201 aa2.22□□□□□ -2.05
HERC4-201ENST00000277817 CYSRT1A8MQ03 144 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 OOSP1A8MZH6 123 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 TMEM262E9PQX1 116 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 H7C1H1 209 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 OVOL1O14753 267 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 ATP6V0E1O15342 81 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 TDGF1P3P51864 188 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 DAZAP2Q15038 168 aaPredicted RBP2.21□□□□□ -2.05
HERC4-201ENST00000277817 BOD1L2Q8IYS8 172 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 MAPK1IP1LQ8NDC0 245 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 TMEM158Q8WZ71 300 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 FXYD5Q96DB9 178 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 MRAP2Q96G30 205 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 YPEL4Q96NS1 127 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 PRSS22Q9GZN4 317 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 MS4A6AQ9H2W1 248 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 CTSZQ9UBR2 303 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 IGF2RP11717 2491 aa2.21□□□□□ -2.05
HERC4-201ENST00000277817 EML6Q6ZMW3 1958 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 TRBV7-1A0A0A6YYK4 115 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 SMIM27A0A1W2PRY6 76 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 UBE2E1P51965 193 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 ORMDL2Q53FV1 153 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 MORN5Q5VZ52 161 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 Q6ZVQ6 151 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 OR2K2Q8NGT1 345 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 FAM19A4Q96LR4 140 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 UBE2E2Q96LR5 201 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 MLST8Q9BVC4 326 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 RHPN1-AS1Q9BWJ2 59 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 CYSLTR1Q9Y271 337 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 C5orf42Q9H799 3197 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 IGLV9-49A0A0B4J1Y8 123 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 ZNF815PA8K554 130 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 IGLC1P0CG04 106 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 POU2AF1Q16633 256 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 TDRG1Q3Y452 100 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 ZC2HC1BQ5TFG8 222 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 LINC00311Q8N616 119 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 GFRA4Q9GZZ7 299 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 ZFHX3Q15911 3703 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 NBEAQ8NFP9 2946 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 TRGV2A0A075B6R0 118 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 IGLC7A0M8Q6 106 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 SHISA9B4DS77 424 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 B4DSR2 109 aa2.21□□□□□ -2.06
HERC4-201ENST00000277817 E7EUB6 86 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms